RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 TROQ12816 1431 aaPredicted RBP15.11■□□□□ 0.01
TRAPPC9-212ENST00000521944 CPS1P31327 1500 aa15.11■□□□□ 0.01
TRAPPC9-212ENST00000521944 ABCC1P33527 1531 aa15.1■□□□□ 0.01
TRAPPC9-212ENST00000521944 NEURL4Q96JN8 1562 aa15.09■□□□□ 0.01
TRAPPC9-212ENST00000521944 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0
TRAPPC9-212ENST00000521944 SUPT6HQ7KZ85 1726 aaKnown RBP15.07■□□□□ 0
TRAPPC9-212ENST00000521944 SRCAPQ6ZRS2 3230 aa15.07■□□□□ 0
TRAPPC9-212ENST00000521944 POTEAQ6S8J7 498 aa15.07■□□□□ 0
TRAPPC9-212ENST00000521944 CDK11AQ9UQ88 783 aaPredicted RBP15.07■□□□□ 0
TRAPPC9-212ENST00000521944 VWDEQ8N2E2 1590 aa15.07■□□□□ 0
TRAPPC9-212ENST00000521944 DNMT1P26358 1616 aaKnown RBP15.06■□□□□ 0
TRAPPC9-212ENST00000521944 CLTCQ00610 1675 aaKnown RBP15.06■□□□□ 0
TRAPPC9-212ENST00000521944 A2ML1A8K2U0 1454 aa15.06■□□□□ 0
TRAPPC9-212ENST00000521944 ITSN2Q9NZM3 1697 aa15.06■□□□□ 0
TRAPPC9-212ENST00000521944 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
TRAPPC9-212ENST00000521944 GGT6Q6P531 493 aa15.01□□□□□ -0.01
TRAPPC9-212ENST00000521944 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
TRAPPC9-212ENST00000521944 PLXNC1O60486 1568 aa15□□□□□ -0.01
TRAPPC9-212ENST00000521944 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
TRAPPC9-212ENST00000521944 LRRIQ1Q96JM4 1722 aa15□□□□□ -0.01
TRAPPC9-212ENST00000521944 CLIP1P30622 1438 aa14.99□□□□□ -0.01
TRAPPC9-212ENST00000521944 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
TRAPPC9-212ENST00000521944 STRCP1A6NGW2 1772 aa14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 POLR1AO95602 1720 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRAPPC9-212ENST00000521944 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
TRAPPC9-212ENST00000521944 ANKLE2Q86XL3 938 aa14.97□□□□□ -0.01
TRAPPC9-212ENST00000521944 MED14O60244 1454 aa14.96□□□□□ -0.01
TRAPPC9-212ENST00000521944 A2MP01023 1474 aa14.96□□□□□ -0.01
TRAPPC9-212ENST00000521944 NPHP4O75161 1426 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-212ENST00000521944 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
TRAPPC9-212ENST00000521944 CDC42BPAQ5VT25 1732 aa14.94□□□□□ -0.02
TRAPPC9-212ENST00000521944 ATP7AQ04656 1500 aa14.93□□□□□ -0.02
TRAPPC9-212ENST00000521944 SYCP2Q9BX26 1530 aa14.93□□□□□ -0.02
TRAPPC9-212ENST00000521944 TNRQ92752 1358 aa14.93□□□□□ -0.02
TRAPPC9-212ENST00000521944 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC9-212ENST00000521944 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-212ENST00000521944 THEMISQ8N1K5 641 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC9-212ENST00000521944 GPATCH8Q9UKJ3 1502 aaKnown RBP14.9□□□□□ -0.02
TRAPPC9-212ENST00000521944 EEA1Q15075 1411 aa14.9□□□□□ -0.02
TRAPPC9-212ENST00000521944 DEPDC5O75140 1603 aa14.89□□□□□ -0.03
TRAPPC9-212ENST00000521944 RNF17Q9BXT8 1623 aaKnown RBP14.89□□□□□ -0.03
TRAPPC9-212ENST00000521944 KIAA1107Q9UPP5 1409 aa14.88□□□□□ -0.03
TRAPPC9-212ENST00000521944 MIA2Q96PC5 1412 aa14.87□□□□□ -0.03
TRAPPC9-212ENST00000521944 UPF1Q92900 1129 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAPPC9-212ENST00000521944 RBM42Q9BTD8 480 aaKnown RBP14.87□□□□□ -0.03
TRAPPC9-212ENST00000521944 PZPP20742 1482 aa14.87□□□□□ -0.03
TRAPPC9-212ENST00000521944 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
TRAPPC9-212ENST00000521944 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
TRAPPC9-212ENST00000521944 FAM135BQ49AJ0 1406 aa14.84□□□□□ -0.03
TRAPPC9-212ENST00000521944 XIRP1Q702N8 1843 aaKnown RBP14.83□□□□□ -0.04
TRAPPC9-212ENST00000521944 SYNMO15061 1565 aa14.83□□□□□ -0.04
TRAPPC9-212ENST00000521944 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 MKRN4PQ13434 485 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 ZNF644Q9H582 1327 aaPredicted RBP14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 DHX29Q7Z478 1369 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 FAM135AQ9P2D6 1515 aa14.82□□□□□ -0.04
TRAPPC9-212ENST00000521944 CASKIN1Q8WXD9 1431 aa14.81□□□□□ -0.04
TRAPPC9-212ENST00000521944 KIF3BO15066 747 aa14.8□□□□□ -0.04
TRAPPC9-212ENST00000521944 CFDP1Q9UEE9 299 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-212ENST00000521944 ZC3H13Q5T200 1668 aaKnown RBP14.8□□□□□ -0.04
TRAPPC9-212ENST00000521944 ADGBQ8N7X0 1667 aa14.8□□□□□ -0.04
TRAPPC9-212ENST00000521944 MBD5Q9P267 1494 aa14.79□□□□□ -0.04
TRAPPC9-212ENST00000521944 CCDC18Q5T9S5 1454 aa14.78□□□□□ -0.04
TRAPPC9-212ENST00000521944 PLEKHH2Q8IVE3 1493 aa14.78□□□□□ -0.04
TRAPPC9-212ENST00000521944 WASHC2CQ9Y4E1 1318 aa14.78□□□□□ -0.04
TRAPPC9-212ENST00000521944 LTKP29376 864 aa14.78□□□□□ -0.04
TRAPPC9-212ENST00000521944 KDM5DQ9BY66 1539 aa14.77□□□□□ -0.04
TRAPPC9-212ENST00000521944 RTEL1-TNFRSF6BF6WH68 1400 aa14.75□□□□□ -0.05
TRAPPC9-212ENST00000521944 ROBO1Q9Y6N7 1651 aa14.72□□□□□ -0.05
TRAPPC9-212ENST00000521944 NCOA2Q15596 1464 aa14.72□□□□□ -0.05
TRAPPC9-212ENST00000521944 RBM33Q96EV2 1170 aaKnown RBP14.72□□□□□ -0.05
TRAPPC9-212ENST00000521944 TMEM94Q12767 1356 aa14.72□□□□□ -0.05
TRAPPC9-212ENST00000521944 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
TRAPPC9-212ENST00000521944 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
TRAPPC9-212ENST00000521944 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
TRAPPC9-212ENST00000521944 TRIM52Q96A61 297 aa14.71□□□□□ -0.05
TRAPPC9-212ENST00000521944 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.06
TRAPPC9-212ENST00000521944 SCAF11Q99590 1463 aaKnown RBP14.7□□□□□ -0.06
TRAPPC9-212ENST00000521944 ARHGAP23Q9P227 1491 aa14.69□□□□□ -0.06
TRAPPC9-212ENST00000521944 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
TRAPPC9-212ENST00000521944 LRP6O75581 1613 aa14.69□□□□□ -0.06
TRAPPC9-212ENST00000521944 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
TRAPPC9-212ENST00000521944 JCADQ9P266 1359 aa14.67□□□□□ -0.06
TRAPPC9-212ENST00000521944 ERVK-7P63135 1459 aa14.67□□□□□ -0.06
TRAPPC9-212ENST00000521944 UBR1Q8IWV7 1749 aa14.66□□□□□ -0.06
TRAPPC9-212ENST00000521944 SLIT1O75093 1534 aa14.66□□□□□ -0.06
TRAPPC9-212ENST00000521944 FYCO1Q9BQS8 1478 aa14.65□□□□□ -0.06
TRAPPC9-212ENST00000521944 ABCC3O15438 1527 aa14.65□□□□□ -0.06
TRAPPC9-212ENST00000521944 KCNA6P17658 529 aa14.64□□□□□ -0.07
TRAPPC9-212ENST00000521944 ZNF772Q68DY9 489 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-212ENST00000521944 SLAIN2Q9P270 581 aa14.63□□□□□ -0.07
TRAPPC9-212ENST00000521944 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
TRAPPC9-212ENST00000521944 PROSER2Q86WR7 435 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC9-212ENST00000521944 PHLPP1O60346 1717 aa14.61□□□□□ -0.07
TRAPPC9-212ENST00000521944 CFAP65Q6ZU64 1925 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms