RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 ARHGEF5Q12774 1597 aa32.92■■■□□ 2.86
PABPC1-218ENST00000521865 KANK4Q5T7N3 995 aaPredicted RBP32.92■■■□□ 2.86
PABPC1-218ENST00000521865 FBXO31Q5XUX0 539 aaPredicted RBP32.92■■■□□ 2.86
PABPC1-218ENST00000521865 TNRQ92752 1358 aa32.9■■■□□ 2.86
PABPC1-218ENST00000521865 KDM5DQ9BY66 1539 aa32.9■■■□□ 2.86
PABPC1-218ENST00000521865 A2ML1A8K2U0 1454 aa32.89■■■□□ 2.86
PABPC1-218ENST00000521865 ZNF335Q9H4Z2 1342 aaPredicted RBP32.89■■■□□ 2.86
PABPC1-218ENST00000521865 TCOF1Q13428 1488 aaKnown RBP32.87■■■□□ 2.85
PABPC1-218ENST00000521865 PZPP20742 1482 aa32.85■■■□□ 2.85
PABPC1-218ENST00000521865 FAM135AQ9P2D6 1515 aa32.84■■■□□ 2.85
PABPC1-218ENST00000521865 IQSEC2Q5JU85 1478 aa32.84■■■□□ 2.85
PABPC1-218ENST00000521865 MAP3K1Q13233 1512 aa32.83■■■□□ 2.85
PABPC1-218ENST00000521865 MYOM3Q5VTT5 1437 aa32.82■■■□□ 2.84
PABPC1-218ENST00000521865 APLP2Q06481 763 aa32.81■■■□□ 2.84
PABPC1-218ENST00000521865 DNMT1P26358 1616 aaKnown RBP32.8■■■□□ 2.84
PABPC1-218ENST00000521865 MIA2Q96PC5 1412 aa32.79■■■□□ 2.84
PABPC1-218ENST00000521865 MAST1Q9Y2H9 1570 aa32.75■■■□□ 2.83
PABPC1-218ENST00000521865 DISP3Q9P2K9 1392 aa32.74■■■□□ 2.83
PABPC1-218ENST00000521865 UBAP1LF5GYI3 381 aa32.74■■■□□ 2.83
PABPC1-218ENST00000521865 THEMISQ8N1K5 641 aaPredicted RBP32.73■■■□□ 2.83
PABPC1-218ENST00000521865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.71■■■□□ 2.839e-8■□□□□ 8.7
PABPC1-218ENST00000521865 ANKLE2Q86XL3 938 aa32.71■■■□□ 2.83
PABPC1-218ENST00000521865 NLRP1Q9C000 1473 aa32.7■■■□□ 2.83
PABPC1-218ENST00000521865 ABCC3O15438 1527 aa32.67■■■□□ 2.82
PABPC1-218ENST00000521865 RNF17Q9BXT8 1623 aaKnown RBP32.66■■■□□ 2.82
PABPC1-218ENST00000521865 UGGT1Q9NYU2 1555 aa32.66■■■□□ 2.82
PABPC1-218ENST00000521865 EIF2AK4Q9P2K8 1649 aaKnown RBP32.63■■■□□ 2.81
PABPC1-218ENST00000521865 DUOX2Q9NRD8 1548 aa32.62■■■□□ 2.81
PABPC1-218ENST00000521865 KIF15Q9NS87 1388 aa32.61■■■□□ 2.81
PABPC1-218ENST00000521865 RRP7BPQ9NSQ0 103 aa32.61■■■□□ 2.81
PABPC1-218ENST00000521865 NEURL4Q96JN8 1562 aa32.61■■■□□ 2.81
PABPC1-218ENST00000521865 ZC3H13Q5T200 1668 aaKnown RBP32.6■■■□□ 2.81
PABPC1-218ENST00000521865 POLR1AO95602 1720 aaPredicted RBP32.6■■■□□ 2.81
PABPC1-218ENST00000521865 ABCC5O15440 1437 aa32.58■■■□□ 2.81
PABPC1-218ENST00000521865 ERVK-7P63135 1459 aa32.57■■■□□ 2.8
PABPC1-218ENST00000521865 SHANK2Q9UPX8 1470 aa32.56■■■□□ 2.8
PABPC1-218ENST00000521865 NPHP4O75161 1426 aaPredicted RBP32.56■■■□□ 2.8
PABPC1-218ENST00000521865 PTPN23Q9H3S7 1636 aa32.55■■■□□ 2.8
PABPC1-218ENST00000521865 SCAF1Q9H7N4 1312 aaKnown RBP32.55■■■□□ 2.8
PABPC1-218ENST00000521865 SPATA31D1Q6ZQQ2 1576 aa32.55■■■□□ 2.8
PABPC1-218ENST00000521865 MROH1Q8NDA8 1641 aa32.55■■■□□ 2.8
PABPC1-218ENST00000521865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.54■■■□□ 2.8
PABPC1-218ENST00000521865 CPS1P31327 1500 aa32.53■■■□□ 2.8
PABPC1-218ENST00000521865 DAPK1P53355 1430 aa32.51■■■□□ 2.8
PABPC1-218ENST00000521865 FGD6Q6ZV73 1430 aa32.51■■■□□ 2.8
PABPC1-218ENST00000521865 ERBINQ96RT1 1412 aa32.51■■■□□ 2.8
PABPC1-218ENST00000521865 ILDR2Q71H61 639 aa32.51■■■□□ 2.79
PABPC1-218ENST00000521865 CHIC2Q9UKJ5 165 aa32.5■■■□□ 2.79
PABPC1-218ENST00000521865 MED14O60244 1454 aa32.49■■■□□ 2.79
PABPC1-218ENST00000521865 PIP4K2BP78356 416 aa32.49■■■□□ 2.79
PABPC1-218ENST00000521865 TOM1O60784 492 aa32.48■■■□□ 2.79
PABPC1-218ENST00000521865 CEP152O94986 1710 aa32.48■■■□□ 2.79
PABPC1-218ENST00000521865 DEPDC5O75140 1603 aa32.47■■■□□ 2.79
PABPC1-218ENST00000521865 CROCC2H7BZ55 1655 aa32.46■■■□□ 2.79
PABPC1-218ENST00000521865 KANK1Q14678 1352 aa32.45■■■□□ 2.79
PABPC1-218ENST00000521865 PRDM15P57071 1507 aaPredicted RBP32.44■■■□□ 2.78
PABPC1-218ENST00000521865 VWDEQ8N2E2 1590 aa32.44■■■□□ 2.78
PABPC1-218ENST00000521865 ANKRD30AQ9BXX3 1397 aa32.44■■■□□ 2.78
PABPC1-218ENST00000521865 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
PABPC1-218ENST00000521865 IQGAP1P46940 1657 aa32.4■■■□□ 2.78
PABPC1-218ENST00000521865 STAG3Q9UJ98 1225 aa32.38■■■□□ 2.77
PABPC1-218ENST00000521865 FAM50AQ14320 339 aaKnown RBP32.37■■■□□ 2.77
PABPC1-218ENST00000521865 TXNDC2Q86VQ3 553 aa32.36■■■□□ 2.77
PABPC1-218ENST00000521865 HSPA1LP34931 641 aa32.35■■■□□ 2.77
PABPC1-218ENST00000521865 CFAP65Q6ZU64 1925 aaKnown RBP32.35■■■□□ 2.77
PABPC1-218ENST00000521865 SCAF11Q99590 1463 aaKnown RBP32.35■■■□□ 2.77
PABPC1-218ENST00000521865 EID1Q9Y6B2 187 aa32.34■■■□□ 2.77
PABPC1-218ENST00000521865 UBR1Q8IWV7 1749 aa32.34■■■□□ 2.77
PABPC1-218ENST00000521865 SOCS7O14512 581 aa32.32■■■□□ 2.76
PABPC1-218ENST00000521865 LTKP29376 864 aa32.32■■■□□ 2.76
PABPC1-218ENST00000521865 ARHGAP23Q9P227 1491 aa32.28■■■□□ 2.76
PABPC1-218ENST00000521865 SLIT1O75093 1534 aa32.26■■■□□ 2.76
PABPC1-218ENST00000521865 LRRC7Q96NW7 1537 aa32.26■■■□□ 2.75
PABPC1-218ENST00000521865 LMTK2Q8IWU2 1503 aa32.25■■■□□ 2.75
PABPC1-218ENST00000521865 TMEM2Q9UHN6 1383 aa32.23■■■□□ 2.75
PABPC1-218ENST00000521865 IDI1Q13907 227 aa32.23■■■□□ 2.75
PABPC1-218ENST00000521865 PIK3C2BO00750 1634 aa32.22■■■□□ 2.75
PABPC1-218ENST00000521865 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
PABPC1-218ENST00000521865 ADGRL2O95490 1459 aa32.22■■■□□ 2.75
PABPC1-218ENST00000521865 SYNMO15061 1565 aa32.19■■■□□ 2.74
PABPC1-218ENST00000521865 ANKRD50Q9ULJ7 1429 aa32.18■■■□□ 2.74
PABPC1-218ENST00000521865 STRCP1A6NGW2 1772 aa32.18■■■□□ 2.74
PABPC1-218ENST00000521865 EFCAB6Q5THR3 1501 aa32.18■■■□□ 2.74
PABPC1-218ENST00000521865 ALKQ9UM73 1620 aa32.14■■■□□ 2.74
PABPC1-218ENST00000521865 NOS1P29475 1434 aa32.13■■■□□ 2.73
PABPC1-218ENST00000521865 SLC52A1Q9NWF4 448 aa32.13■■■□□ 2.73
PABPC1-218ENST00000521865 BCANQ96GW7 911 aa32.11■■■□□ 2.73
PABPC1-218ENST00000521865 SLC26A8Q96RN1 970 aa32.1■■■□□ 2.73
PABPC1-218ENST00000521865 MED1Q15648 1581 aaPredicted RBP32.08■■■□□ 2.73
PABPC1-218ENST00000521865 KDM5AP29375 1690 aaKnown RBP32.06■■■□□ 2.72
PABPC1-218ENST00000521865 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
PABPC1-218ENST00000521865 RPRD2Q5VT52 1461 aaKnown RBP32.04■■■□□ 2.72
PABPC1-218ENST00000521865 PHF23Q9BUL5 403 aaPredicted RBP32.04■■■□□ 2.72
PABPC1-218ENST00000521865 KCNA6P17658 529 aa32.03■■■□□ 2.72
PABPC1-218ENST00000521865 TMEM94Q12767 1356 aa32■■■□□ 2.71
PABPC1-218ENST00000521865 PPP1R15AO75807 674 aaPredicted RBP32■■■□□ 2.71
PABPC1-218ENST00000521865 ITGAEP38570 1179 aa32■■■□□ 2.71
PABPC1-218ENST00000521865 PROSER2Q86WR7 435 aaPredicted RBP31.99■■■□□ 2.71
PABPC1-218ENST00000521865 CHGAP10645 457 aaKnown RBP31.98■■■□□ 2.71
PABPC1-218ENST00000521865 HDGFP51858 240 aaKnown RBP31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms