RNA–Protein interactions for RNA: ENST00000521738.1

UBLCP1-203, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

TSL 5

Gene UBLCP1, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-203ENST00000521738 NYAP1Q6ZVC0 841 aa9.36□□□□□ -0.91
UBLCP1-203ENST00000521738 LAPTM4BQ86VI4 370 aa9.36□□□□□ -0.91
UBLCP1-203ENST00000521738 RYDENQ9NUL5 291 aaKnown RBP9.36□□□□□ -0.91
UBLCP1-203ENST00000521738 WBP1LQ9NX94 342 aa9.36□□□□□ -0.91
UBLCP1-203ENST00000521738 KCNC4Q03721 635 aa9.35□□□□□ -0.91
UBLCP1-203ENST00000521738 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
UBLCP1-203ENST00000521738 LCE2BO14633 110 aa9.34□□□□□ -0.91
UBLCP1-203ENST00000521738 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
UBLCP1-203ENST00000521738 KIAA1468Q9P260 1216 aa9.33□□□□□ -0.92
UBLCP1-203ENST00000521738 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
UBLCP1-203ENST00000521738 TYW1BQ6NUM6 668 aa9.31□□□□□ -0.92
UBLCP1-203ENST00000521738 EMILIN3Q9NT22 766 aa9.31□□□□□ -0.92
UBLCP1-203ENST00000521738 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
UBLCP1-203ENST00000521738 FBXW7Q969H0 707 aa9.3□□□□□ -0.92
UBLCP1-203ENST00000521738 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
UBLCP1-203ENST00000521738 MFSD10Q14728 455 aa9.29□□□□□ -0.92
UBLCP1-203ENST00000521738 ONECUT3O60422 494 aaPredicted RBP9.28□□□□□ -0.92
UBLCP1-203ENST00000521738 PHF14O94880 888 aa9.28□□□□□ -0.92
UBLCP1-203ENST00000521738 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
UBLCP1-203ENST00000521738 GFRA3O60609 400 aa9.27□□□□□ -0.93
UBLCP1-203ENST00000521738 BBXQ8WY36 941 aaPredicted RBP9.27□□□□□ -0.93
UBLCP1-203ENST00000521738 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
UBLCP1-203ENST00000521738 FAM98CQ17RN3 349 aaKnown RBP9.25□□□□□ -0.93
UBLCP1-203ENST00000521738 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
UBLCP1-203ENST00000521738 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
UBLCP1-203ENST00000521738 C6orf132Q5T0Z8 1188 aa9.24□□□□□ -0.93
UBLCP1-203ENST00000521738 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
UBLCP1-203ENST00000521738 GTPBP6O43824 516 aaPredicted RBP9.23□□□□□ -0.93
UBLCP1-203ENST00000521738 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
UBLCP1-203ENST00000521738 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.22□□□□□ -0.93
UBLCP1-203ENST00000521738 EPAS1Q99814 870 aa9.2□□□□□ -0.94
UBLCP1-203ENST00000521738 NRG2O14511 850 aaPredicted RBP9.18□□□□□ -0.94
UBLCP1-203ENST00000521738 PRKD2Q9BZL6 878 aa9.18□□□□□ -0.94
UBLCP1-203ENST00000521738 PLCB2Q00722 1185 aa9.17□□□□□ -0.94
UBLCP1-203ENST00000521738 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
UBLCP1-203ENST00000521738 RBM33Q96EV2 1170 aaKnown RBP9.17□□□□□ -0.94
UBLCP1-203ENST00000521738 PAXIP1Q6ZW49 1069 aaPredicted RBP9.16□□□□□ -0.94
UBLCP1-203ENST00000521738 PPP4CP60510 307 aa9.15□□□□□ -0.94
UBLCP1-203ENST00000521738 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.94
UBLCP1-203ENST00000521738 CFAP44Q96MT7 982 aa9.15□□□□□ -0.94
UBLCP1-203ENST00000521738 TSKSQ9UJT2 592 aa9.14□□□□□ -0.95
UBLCP1-203ENST00000521738 DPYSL4O14531 572 aa9.13□□□□□ -0.95
UBLCP1-203ENST00000521738 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
UBLCP1-203ENST00000521738 CADPS2Q86UW7 1296 aa9.13□□□□□ -0.95
UBLCP1-203ENST00000521738 PACS2Q86VP3 889 aa9.12□□□□□ -0.95
UBLCP1-203ENST00000521738 DDX12PQ92771 950 aa9.12□□□□□ -0.95
UBLCP1-203ENST00000521738 V9GY48 417 aaPredicted RBP9.12□□□□□ -0.95
UBLCP1-203ENST00000521738 CAMK2BQ13554 666 aa9.11□□□□□ -0.95
UBLCP1-203ENST00000521738 MTRQ99707 1265 aa9.11□□□□□ -0.95
UBLCP1-203ENST00000521738 ZNF787Q6DD87 383 aa9.1□□□□□ -0.95
UBLCP1-203ENST00000521738 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
UBLCP1-203ENST00000521738 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
UBLCP1-203ENST00000521738 IL21Q9HBE4 155 aa9.09□□□□□ -0.95
UBLCP1-203ENST00000521738 SMAPO00193 183 aa9.08□□□□□ -0.96
UBLCP1-203ENST00000521738 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
UBLCP1-203ENST00000521738 ZNF516Q92618 1163 aa9.07□□□□□ -0.96
UBLCP1-203ENST00000521738 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
UBLCP1-203ENST00000521738 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
UBLCP1-203ENST00000521738 MAP3K7O43318 606 aa9.06□□□□□ -0.96
UBLCP1-203ENST00000521738 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
UBLCP1-203ENST00000521738 NBR1Q14596 966 aa9.06□□□□□ -0.96
UBLCP1-203ENST00000521738 ZNF775Q96BV0 537 aaPredicted RBP9.05□□□□□ -0.96
UBLCP1-203ENST00000521738 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
UBLCP1-203ENST00000521738 CDCA7LQ96GN5 454 aa9.04□□□□□ -0.96
UBLCP1-203ENST00000521738 FAM198AQ9UFP1 575 aa9.04□□□□□ -0.96
UBLCP1-203ENST00000521738 C3orf80F5H4A9 247 aa9.03□□□□□ -0.96
UBLCP1-203ENST00000521738 PRSS12P56730 875 aa9.01□□□□□ -0.97
UBLCP1-203ENST00000521738 NKX2-3Q8TAU0 364 aa9.01□□□□□ -0.97
UBLCP1-203ENST00000521738 APLP1P51693 650 aa9□□□□□ -0.97
UBLCP1-203ENST00000521738 TATDN2Q93075 761 aa9□□□□□ -0.97
UBLCP1-203ENST00000521738 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
UBLCP1-203ENST00000521738 RNF40O75150 1001 aa8.98□□□□□ -0.97
UBLCP1-203ENST00000521738 PDIA6Q15084 440 aa8.98□□□□□ -0.97
UBLCP1-203ENST00000521738 PNMA3Q9UL41 463 aa8.98□□□□□ -0.97
UBLCP1-203ENST00000521738 NBPF26B4DH59 902 aa8.97□□□□□ -0.97
UBLCP1-203ENST00000521738 PRIM1P49642 420 aaKnown RBP8.96□□□□□ -0.98
UBLCP1-203ENST00000521738 CERKQ8TCT0 537 aa8.96□□□□□ -0.98
UBLCP1-203ENST00000521738 GGCXP38435 758 aa8.95□□□□□ -0.98
UBLCP1-203ENST00000521738 COPS2P61201 443 aa8.94□□□□□ -0.98
UBLCP1-203ENST00000521738 TRIM67Q6ZTA4 783 aa8.94□□□□□ -0.98
UBLCP1-203ENST00000521738 NUDT18Q6ZVK8 323 aa8.94□□□□□ -0.98
UBLCP1-203ENST00000521738 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
UBLCP1-203ENST00000521738 TMUB1Q9BVT8 246 aa8.93□□□□□ -0.98
UBLCP1-203ENST00000521738 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
UBLCP1-203ENST00000521738 VSIG10Q8N0Z9 540 aa8.9□□□□□ -0.98
UBLCP1-203ENST00000521738 POTECB2RU33 542 aa8.89□□□□□ -0.99
UBLCP1-203ENST00000521738 ZPR1O75312 459 aa8.89□□□□□ -0.99
UBLCP1-203ENST00000521738 MYT1Q01538 1121 aa8.89□□□□□ -0.99
UBLCP1-203ENST00000521738 EMID1Q96A84 441 aaPredicted RBP8.89□□□□□ -0.99
UBLCP1-203ENST00000521738 CDHR5Q9HBB8 845 aa8.89□□□□□ -0.99
UBLCP1-203ENST00000521738 GRXCR2A6NFK2 248 aa8.88□□□□□ -0.99
UBLCP1-203ENST00000521738 SLC19A1P41440 591 aa8.88□□□□□ -0.99
UBLCP1-203ENST00000521738 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
UBLCP1-203ENST00000521738 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
UBLCP1-203ENST00000521738 NECTIN2Q92692 538 aa8.88□□□□□ -0.99
UBLCP1-203ENST00000521738 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
UBLCP1-203ENST00000521738 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
UBLCP1-203ENST00000521738 DGAT1O75907 488 aa8.86□□□□□ -0.99
UBLCP1-203ENST00000521738 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
UBLCP1-203ENST00000521738 KDM2AQ9Y2K7 1162 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms