RNA–Protein interactions for RNA: ENST00000521615.1

CLINT1-204, Transcript of clathrin interactor 1, humanhuman

TSL 3

Gene CLINT1, Length 399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-204ENST00000521615 DEPDC5O75140 1603 aa8.12□□□□□ -1.11
CLINT1-204ENST00000521615 IQGAP3Q86VI3 1631 aa8.12□□□□□ -1.11
CLINT1-204ENST00000521615 TRIM52Q96A61 297 aa8.12□□□□□ -1.11
CLINT1-204ENST00000521615 BCORL1Q5H9F3 1711 aa8.12□□□□□ -1.11
CLINT1-204ENST00000521615 DIP2CQ9Y2E4 1556 aa8.11□□□□□ -1.11
CLINT1-204ENST00000521615 AFAP1Q8N556 730 aa8.11□□□□□ -1.11
CLINT1-204ENST00000521615 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
CLINT1-204ENST00000521615 RNF17Q9BXT8 1623 aaKnown RBP8.1□□□□□ -1.11
CLINT1-204ENST00000521615 A2MP01023 1474 aa8.09□□□□□ -1.11
CLINT1-204ENST00000521615 PRDM15P57071 1507 aaPredicted RBP8.08□□□□□ -1.12
CLINT1-204ENST00000521615 ARHGEF40Q8TER5 1519 aa8.08□□□□□ -1.12
CLINT1-204ENST00000521615 FAM135AQ9P2D6 1515 aa8.08□□□□□ -1.12
CLINT1-204ENST00000521615 PZPP20742 1482 aa8.08□□□□□ -1.12
CLINT1-204ENST00000521615 REREQ9P2R6 1566 aa8.08□□□□□ -1.12
CLINT1-204ENST00000521615 ZC3H13Q5T200 1668 aaKnown RBP8.08□□□□□ -1.12
CLINT1-204ENST00000521615 TET3O43151 1660 aa8.07□□□□□ -1.12
CLINT1-204ENST00000521615 NUP155O75694 1391 aa8.07□□□□□ -1.12
CLINT1-204ENST00000521615 KANK1Q14678 1352 aa8.07□□□□□ -1.12
CLINT1-204ENST00000521615 DHX29Q7Z478 1369 aaKnown RBP8.07□□□□□ -1.12
CLINT1-204ENST00000521615 RAPGEF3O95398 923 aa8.06□□□□□ -1.12
CLINT1-204ENST00000521615 MPHOSPH9Q99550 1183 aa8.06□□□□□ -1.12
CLINT1-204ENST00000521615 MROH1Q8NDA8 1641 aa8.06□□□□□ -1.12
CLINT1-204ENST00000521615 CEP152O94986 1710 aa8.06□□□□□ -1.12
CLINT1-204ENST00000521615 VWDEQ8N2E2 1590 aa8.05□□□□□ -1.12
CLINT1-204ENST00000521615 SPHKAPQ2M3C7 1700 aa8.04□□□□□ -1.12
CLINT1-204ENST00000521615 E9PCH4 1651 aa8.04□□□□□ -1.12
CLINT1-204ENST00000521615 YEATS2Q9ULM3 1422 aa8.03□□□□□ -1.12
CLINT1-204ENST00000521615 ATP10AO60312 1499 aa8.03□□□□□ -1.12
CLINT1-204ENST00000521615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.03□□□□□ -1.129e-7■■□□□ 13.3
CLINT1-204ENST00000521615 CAMSAP1Q5T5Y3 1602 aa8.03□□□□□ -1.12
CLINT1-204ENST00000521615 TONSLQ96HA7 1378 aa8.02□□□□□ -1.13
CLINT1-204ENST00000521615 KIF3BO15066 747 aa8.02□□□□□ -1.13
CLINT1-204ENST00000521615 AGLP35573 1532 aa8.02□□□□□ -1.13
CLINT1-204ENST00000521615 EFCAB6Q5THR3 1501 aa8.02□□□□□ -1.13
CLINT1-204ENST00000521615 LMTK2Q8IWU2 1503 aa8.02□□□□□ -1.13
CLINT1-204ENST00000521615 PKD2Q13563 968 aa8.01□□□□□ -1.13
CLINT1-204ENST00000521615 RTN4Q9NQC3 1192 aaKnown RBP8.01□□□□□ -1.13
CLINT1-204ENST00000521615 TIMELESSQ9UNS1 1208 aa8.01□□□□□ -1.13
CLINT1-204ENST00000521615 RPRD2Q5VT52 1461 aaKnown RBP8□□□□□ -1.13
CLINT1-204ENST00000521615 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
CLINT1-204ENST00000521615 TRPM2O94759 1503 aa8□□□□□ -1.13
CLINT1-204ENST00000521615 NEUROD1Q13562 356 aa8□□□□□ -1.13
CLINT1-204ENST00000521615 ANKRD30BQ9BXX2 1392 aa7.99□□□□□ -1.13
CLINT1-204ENST00000521615 ABCC3O15438 1527 aa7.99□□□□□ -1.13
CLINT1-204ENST00000521615 SIN3AQ96ST3 1273 aa7.99□□□□□ -1.13
CLINT1-204ENST00000521615 SIGLEC1Q9BZZ2 1709 aa7.99□□□□□ -1.13
CLINT1-204ENST00000521615 CLTCQ00610 1675 aaKnown RBP7.98□□□□□ -1.13
CLINT1-204ENST00000521615 CCDC144AA2RUR9 1427 aa7.98□□□□□ -1.13
CLINT1-204ENST00000521615 FOXD1Q16676 465 aa7.98□□□□□ -1.13
CLINT1-204ENST00000521615 KIF1BO60333 1816 aa7.98□□□□□ -1.13
CLINT1-204ENST00000521615 GGT6Q6P531 493 aa7.97□□□□□ -1.13
CLINT1-204ENST00000521615 CLTCL1P53675 1640 aa7.96□□□□□ -1.13
CLINT1-204ENST00000521615 MROH2AA6NES4 1674 aa7.96□□□□□ -1.13
CLINT1-204ENST00000521615 PREX1Q8TCU6 1659 aa7.96□□□□□ -1.13
CLINT1-204ENST00000521615 WASHC2CQ9Y4E1 1318 aa7.96□□□□□ -1.14
CLINT1-204ENST00000521615 FER1L4A9Z1Z3 1794 aa7.95□□□□□ -1.14
CLINT1-204ENST00000521615 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
CLINT1-204ENST00000521615 NEURL4Q96JN8 1562 aa7.94□□□□□ -1.14
CLINT1-204ENST00000521615 PTPRTO14522 1441 aa7.94□□□□□ -1.14
CLINT1-204ENST00000521615 ARHGAP31Q2M1Z3 1444 aa7.94□□□□□ -1.14
CLINT1-204ENST00000521615 CNTLNQ9NXG0 1405 aa7.94□□□□□ -1.14
CLINT1-204ENST00000521615 ZBTB22O15209 634 aa7.93□□□□□ -1.14
CLINT1-204ENST00000521615 ESF1Q9H501 851 aaKnown RBP7.93□□□□□ -1.14
CLINT1-204ENST00000521615 ARID4BQ4LE39 1312 aaPredicted RBP7.93□□□□□ -1.14
CLINT1-204ENST00000521615 NPATQ14207 1427 aa7.93□□□□□ -1.14
CLINT1-204ENST00000521615 PLA2R1Q13018 1463 aa7.93□□□□□ -1.14
CLINT1-204ENST00000521615 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
CLINT1-204ENST00000521615 SYNMO15061 1565 aa7.92□□□□□ -1.14
CLINT1-204ENST00000521615 IFT172Q9UG01 1749 aa7.92□□□□□ -1.14
CLINT1-204ENST00000521615 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
CLINT1-204ENST00000521615 SPATA31D1Q6ZQQ2 1576 aa7.9□□□□□ -1.14
CLINT1-204ENST00000521615 UGGT1Q9NYU2 1555 aa7.9□□□□□ -1.14
CLINT1-204ENST00000521615 ADGRB3O60242 1522 aa7.9□□□□□ -1.14
CLINT1-204ENST00000521615 KDM4FA0A1W2PPD8 638 aa7.9□□□□□ -1.14
CLINT1-204ENST00000521615 PPP1R15AO75807 674 aaPredicted RBP7.9□□□□□ -1.14
CLINT1-204ENST00000521615 MLECQ14165 292 aa7.9□□□□□ -1.14
CLINT1-204ENST00000521615 ERVK-7P63135 1459 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 NOS1P29475 1434 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 L3MBTL2Q969R5 705 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 PPLO60437 1756 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 C3P01024 1663 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 TRPM1Q7Z4N2 1603 aa7.89□□□□□ -1.15
CLINT1-204ENST00000521615 SPATA31E1Q6ZUB1 1445 aa7.88□□□□□ -1.15
CLINT1-204ENST00000521615 RIMS1Q86UR5 1692 aaKnown RBP7.88□□□□□ -1.15
CLINT1-204ENST00000521615 MADDQ8WXG6 1647 aa7.88□□□□□ -1.15
CLINT1-204ENST00000521615 UHRF1BP1Q6BDS2 1440 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 KIAA1210Q9ULL0 1709 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 KDM5AP29375 1690 aaKnown RBP7.87□□□□□ -1.15
CLINT1-204ENST00000521615 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
CLINT1-204ENST00000521615 LAMC1P11047 1609 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 MYO5BQ9ULV0 1848 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 MYOM2P54296 1465 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 RALGAPBQ86X10 1494 aa7.87□□□□□ -1.15
CLINT1-204ENST00000521615 TMEM131LA2VDJ0 1609 aa7.86□□□□□ -1.15
CLINT1-204ENST00000521615 STAC3Q96MF2 364 aa7.86□□□□□ -1.15
CLINT1-204ENST00000521615 POLR1AO95602 1720 aaPredicted RBP7.86□□□□□ -1.15
CLINT1-204ENST00000521615 ADAMTSL3P82987 1691 aa7.86□□□□□ -1.15
CLINT1-204ENST00000521615 ZNF316A6NFI3 1004 aaPredicted RBP7.85□□□□□ -1.15
CLINT1-204ENST00000521615 RGL3Q3MIN7 710 aa7.85□□□□□ -1.15
CLINT1-204ENST00000521615 ZNF326Q5BKZ1 582 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms