RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KDM5DQ9BY66 1539 aa23.69■■□□□ 1.38
PRKDC-204ENST00000521331 TNRQ92752 1358 aa23.69■■□□□ 1.38
PRKDC-204ENST00000521331 TSPY4P0CV99 314 aa23.69■■□□□ 1.38
PRKDC-204ENST00000521331 TSPY10P0CW01 314 aa23.69■■□□□ 1.38
PRKDC-204ENST00000521331 WASHC2CQ9Y4E1 1318 aa23.68■■□□□ 1.38
PRKDC-204ENST00000521331 PZPP20742 1482 aa23.68■■□□□ 1.38
PRKDC-204ENST00000521331 ARHGEF5Q12774 1597 aa23.67■■□□□ 1.38
PRKDC-204ENST00000521331 FBXO31Q5XUX0 539 aaPredicted RBP23.66■■□□□ 1.38
PRKDC-204ENST00000521331 VPS8Q8N3P4 1428 aa23.66■■□□□ 1.38
PRKDC-204ENST00000521331 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
PRKDC-204ENST00000521331 LRRC9Q6ZRR7 1453 aa23.64■■□□□ 1.38
PRKDC-204ENST00000521331 UBAP1LF5GYI3 381 aa23.64■■□□□ 1.37
PRKDC-204ENST00000521331 MIA2Q96PC5 1412 aa23.6■■□□□ 1.37
PRKDC-204ENST00000521331 ILDR2Q71H61 639 aa23.59■■□□□ 1.37
PRKDC-204ENST00000521331 NLRP1Q9C000 1473 aa23.59■■□□□ 1.37
PRKDC-204ENST00000521331 SPATA31D1Q6ZQQ2 1576 aa23.58■■□□□ 1.37
PRKDC-204ENST00000521331 THEMISQ8N1K5 641 aaPredicted RBP23.58■■□□□ 1.37
PRKDC-204ENST00000521331 ANKLE2Q86XL3 938 aa23.57■■□□□ 1.36
PRKDC-204ENST00000521331 MAP3K1Q13233 1512 aa23.56■■□□□ 1.36
PRKDC-204ENST00000521331 LOC105371045A0A1W2PR82 267 aa23.55■■□□□ 1.36
PRKDC-204ENST00000521331 MAST1Q9Y2H9 1570 aa23.55■■□□□ 1.36
PRKDC-204ENST00000521331 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.36
PRKDC-204ENST00000521331 NEURL4Q96JN8 1562 aa23.54■■□□□ 1.36
PRKDC-204ENST00000521331 SOCS7O14512 581 aa23.53■■□□□ 1.36
PRKDC-204ENST00000521331 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
PRKDC-204ENST00000521331 CPS1P31327 1500 aa23.53■■□□□ 1.36
PRKDC-204ENST00000521331 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
PRKDC-204ENST00000521331 RNF17Q9BXT8 1623 aaKnown RBP23.52■■□□□ 1.36
PRKDC-204ENST00000521331 MYOM3Q5VTT5 1437 aa23.52■■□□□ 1.36
PRKDC-204ENST00000521331 POLR1AO95602 1720 aaPredicted RBP23.52■■□□□ 1.36
PRKDC-204ENST00000521331 SHANK2Q9UPX8 1470 aa23.51■■□□□ 1.35
PRKDC-204ENST00000521331 ABCC3O15438 1527 aa23.51■■□□□ 1.35
PRKDC-204ENST00000521331 MED14O60244 1454 aa23.49■■□□□ 1.35
PRKDC-204ENST00000521331 EIF2AK4Q9P2K8 1649 aaKnown RBP23.48■■□□□ 1.35
PRKDC-204ENST00000521331 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
PRKDC-204ENST00000521331 NPHP4O75161 1426 aaPredicted RBP23.48■■□□□ 1.35
PRKDC-204ENST00000521331 TOM1O60784 492 aa23.47■■□□□ 1.35
PRKDC-204ENST00000521331 DEPDC5O75140 1603 aa23.46■■□□□ 1.35
PRKDC-204ENST00000521331 ERVK-7P63135 1459 aa23.45■■□□□ 1.34
PRKDC-204ENST00000521331 DUOX2Q9NRD8 1548 aa23.44■■□□□ 1.34
PRKDC-204ENST00000521331 VWDEQ8N2E2 1590 aa23.43■■□□□ 1.34
PRKDC-204ENST00000521331 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
PRKDC-204ENST00000521331 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
PRKDC-204ENST00000521331 PIP4K2BP78356 416 aa23.4■■□□□ 1.34
PRKDC-204ENST00000521331 KIF15Q9NS87 1388 aa23.4■■□□□ 1.34
PRKDC-204ENST00000521331 APLP2Q06481 763 aa23.39■■□□□ 1.33
PRKDC-204ENST00000521331 HSPA1LP34931 641 aa23.38■■□□□ 1.33
PRKDC-204ENST00000521331 ERBINQ96RT1 1412 aa23.38■■□□□ 1.33
PRKDC-204ENST00000521331 IQGAP1P46940 1657 aa23.37■■□□□ 1.33
PRKDC-204ENST00000521331 ABCC5O15440 1437 aa23.36■■□□□ 1.33
PRKDC-204ENST00000521331 ARHGAP31Q2M1Z3 1444 aa23.36■■□□□ 1.33
PRKDC-204ENST00000521331 PRDM15P57071 1507 aaPredicted RBP23.34■■□□□ 1.33
PRKDC-204ENST00000521331 RRP7BPQ9NSQ0 103 aa23.34■■□□□ 1.33
PRKDC-204ENST00000521331 CEP152O94986 1710 aa23.32■■□□□ 1.32
PRKDC-204ENST00000521331 PTPN23Q9H3S7 1636 aa23.32■■□□□ 1.32
PRKDC-204ENST00000521331 DAPK1P53355 1430 aa23.32■■□□□ 1.32
PRKDC-204ENST00000521331 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
PRKDC-204ENST00000521331 KANK1Q14678 1352 aa23.3■■□□□ 1.32
PRKDC-204ENST00000521331 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
PRKDC-204ENST00000521331 FGD6Q6ZV73 1430 aa23.29■■□□□ 1.32
PRKDC-204ENST00000521331 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
PRKDC-204ENST00000521331 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
PRKDC-204ENST00000521331 LRRC7Q96NW7 1537 aa23.28■■□□□ 1.32
PRKDC-204ENST00000521331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.28■■□□□ 1.326e-10■□□□□ 10.2
PRKDC-204ENST00000521331 SLIT1O75093 1534 aa23.28■■□□□ 1.32
PRKDC-204ENST00000521331 SYNMO15061 1565 aa23.27■■□□□ 1.32
PRKDC-204ENST00000521331 TXNDC2Q86VQ3 553 aa23.27■■□□□ 1.32
PRKDC-204ENST00000521331 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
PRKDC-204ENST00000521331 ANKRD30AQ9BXX3 1397 aa23.27■■□□□ 1.31
PRKDC-204ENST00000521331 LTKP29376 864 aa23.26■■□□□ 1.31
PRKDC-204ENST00000521331 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
PRKDC-204ENST00000521331 MED1Q15648 1581 aaPredicted RBP23.24■■□□□ 1.31
PRKDC-204ENST00000521331 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
PRKDC-204ENST00000521331 CHIC2Q9UKJ5 165 aa23.22■■□□□ 1.31
PRKDC-204ENST00000521331 TMEM2Q9UHN6 1383 aa23.22■■□□□ 1.31
PRKDC-204ENST00000521331 LMTK2Q8IWU2 1503 aa23.22■■□□□ 1.31
PRKDC-204ENST00000521331 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
PRKDC-204ENST00000521331 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
PRKDC-204ENST00000521331 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
PRKDC-204ENST00000521331 IDI1Q13907 227 aa23.16■■□□□ 1.3
PRKDC-204ENST00000521331 EFCAB6Q5THR3 1501 aa23.16■■□□□ 1.3
PRKDC-204ENST00000521331 KDM5AP29375 1690 aaKnown RBP23.14■■□□□ 1.29
PRKDC-204ENST00000521331 ADGRL2O95490 1459 aa23.14■■□□□ 1.29
PRKDC-204ENST00000521331 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
PRKDC-204ENST00000521331 NOS1P29475 1434 aa23.13■■□□□ 1.29
PRKDC-204ENST00000521331 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
PRKDC-204ENST00000521331 FAM50AQ14320 339 aaKnown RBP23.1■■□□□ 1.29
PRKDC-204ENST00000521331 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
PRKDC-204ENST00000521331 KCNA6P17658 529 aa23.09■■□□□ 1.29
PRKDC-204ENST00000521331 ANKRD50Q9ULJ7 1429 aa23.08■■□□□ 1.29
PRKDC-204ENST00000521331 RPRD2Q5VT52 1461 aaKnown RBP23.07■■□□□ 1.28
PRKDC-204ENST00000521331 ADGRB3O60242 1522 aa23.07■■□□□ 1.28
PRKDC-204ENST00000521331 TMEM94Q12767 1356 aa23.06■■□□□ 1.28
PRKDC-204ENST00000521331 SLC26A8Q96RN1 970 aa23.05■■□□□ 1.28
PRKDC-204ENST00000521331 TET3O43151 1660 aa23.05■■□□□ 1.28
PRKDC-204ENST00000521331 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
PRKDC-204ENST00000521331 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
PRKDC-204ENST00000521331 XIRP1Q702N8 1843 aaKnown RBP23.01■■□□□ 1.27
PRKDC-204ENST00000521331 BCANQ96GW7 911 aa23.01■■□□□ 1.27
PRKDC-204ENST00000521331 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms