RNA–Protein interactions for RNA: ENST00000521158.5

VDAC3-206, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene VDAC3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-206ENST00000521158 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
VDAC3-206ENST00000521158 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.34
VDAC3-206ENST00000521158 PREX2Q70Z35 1606 aa12.89□□□□□ -0.35
VDAC3-206ENST00000521158 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
VDAC3-206ENST00000521158 CPS1P31327 1500 aa12.88□□□□□ -0.35
VDAC3-206ENST00000521158 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
VDAC3-206ENST00000521158 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
VDAC3-206ENST00000521158 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
VDAC3-206ENST00000521158 CDK11AQ9UQ88 783 aaPredicted RBP12.86□□□□□ -0.35
VDAC3-206ENST00000521158 NEURL4Q96JN8 1562 aa12.86□□□□□ -0.35
VDAC3-206ENST00000521158 TOM1O60784 492 aa12.85□□□□□ -0.35
VDAC3-206ENST00000521158 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
VDAC3-206ENST00000521158 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
VDAC3-206ENST00000521158 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
VDAC3-206ENST00000521158 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
VDAC3-206ENST00000521158 DNMT1P26358 1616 aaKnown RBP12.84□□□□□ -0.35
VDAC3-206ENST00000521158 EEA1Q15075 1411 aa12.84□□□□□ -0.35
VDAC3-206ENST00000521158 SHANK2Q9UPX8 1470 aa12.84□□□□□ -0.35
VDAC3-206ENST00000521158 POLR1AO95602 1720 aaPredicted RBP12.83□□□□□ -0.36
VDAC3-206ENST00000521158 PIP4K2BP78356 416 aa12.83□□□□□ -0.36
VDAC3-206ENST00000521158 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
VDAC3-206ENST00000521158 CLIP1P30622 1438 aa12.82□□□□□ -0.36
VDAC3-206ENST00000521158 A2ML1A8K2U0 1454 aa12.82□□□□□ -0.36
VDAC3-206ENST00000521158 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
VDAC3-206ENST00000521158 ARHGAP35Q9NRY4 1499 aa12.81□□□□□ -0.36
VDAC3-206ENST00000521158 RGS17Q9UGC6 210 aaPredicted RBP12.81□□□□□ -0.36
VDAC3-206ENST00000521158 INO80Q9ULG1 1556 aaPredicted RBP12.78□□□□□ -0.36
VDAC3-206ENST00000521158 ATP7AQ04656 1500 aa12.77□□□□□ -0.37
VDAC3-206ENST00000521158 ATP1B4Q9UN42 357 aaPredicted RBP12.76□□□□□ -0.37
VDAC3-206ENST00000521158 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
VDAC3-206ENST00000521158 MED14O60244 1454 aa12.76□□□□□ -0.37
VDAC3-206ENST00000521158 A2MP01023 1474 aa12.76□□□□□ -0.37
VDAC3-206ENST00000521158 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
VDAC3-206ENST00000521158 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
VDAC3-206ENST00000521158 SPAG9O60271 1321 aaKnown RBP12.74□□□□□ -0.37
VDAC3-206ENST00000521158 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
VDAC3-206ENST00000521158 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
VDAC3-206ENST00000521158 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
VDAC3-206ENST00000521158 ADGBQ8N7X0 1667 aa12.72□□□□□ -0.37
VDAC3-206ENST00000521158 LRRC7Q96NW7 1537 aa12.72□□□□□ -0.37
VDAC3-206ENST00000521158 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
VDAC3-206ENST00000521158 RNF17Q9BXT8 1623 aaKnown RBP12.71□□□□□ -0.37
VDAC3-206ENST00000521158 GGT6Q6P531 493 aa12.71□□□□□ -0.37
VDAC3-206ENST00000521158 CCDC18Q5T9S5 1454 aa12.71□□□□□ -0.38
VDAC3-206ENST00000521158 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
VDAC3-206ENST00000521158 APLP2Q06481 763 aa12.7□□□□□ -0.38
VDAC3-206ENST00000521158 SYNMO15061 1565 aa12.69□□□□□ -0.38
VDAC3-206ENST00000521158 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
VDAC3-206ENST00000521158 TNRQ92752 1358 aa12.69□□□□□ -0.38
VDAC3-206ENST00000521158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.69□□□□□ -0.38
VDAC3-206ENST00000521158 IQGAP1P46940 1657 aa12.68□□□□□ -0.38
VDAC3-206ENST00000521158 PZPP20742 1482 aa12.68□□□□□ -0.38
VDAC3-206ENST00000521158 ANKLE2Q86XL3 938 aa12.68□□□□□ -0.38
VDAC3-206ENST00000521158 CASKIN1Q8WXD9 1431 aa12.68□□□□□ -0.38
VDAC3-206ENST00000521158 FAM135AQ9P2D6 1515 aa12.67□□□□□ -0.38
VDAC3-206ENST00000521158 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
VDAC3-206ENST00000521158 POTEAQ6S8J7 498 aa12.67□□□□□ -0.38
VDAC3-206ENST00000521158 BBXQ8WY36 941 aaPredicted RBP12.67□□□□□ -0.38
VDAC3-206ENST00000521158 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
VDAC3-206ENST00000521158 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
VDAC3-206ENST00000521158 ZC3H13Q5T200 1668 aaKnown RBP12.66□□□□□ -0.38
VDAC3-206ENST00000521158 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
VDAC3-206ENST00000521158 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.38
VDAC3-206ENST00000521158 XIRP1Q702N8 1843 aaKnown RBP12.65□□□□□ -0.38
VDAC3-206ENST00000521158 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
VDAC3-206ENST00000521158 ZNF777Q9ULD5 760 aaPredicted RBP12.65□□□□□ -0.38
VDAC3-206ENST00000521158 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
VDAC3-206ENST00000521158 PAXIP1Q6ZW49 1069 aaPredicted RBP12.64□□□□□ -0.39
VDAC3-206ENST00000521158 RTEL1-TNFRSF6BF6WH68 1400 aa12.63□□□□□ -0.39
VDAC3-206ENST00000521158 KDM5DQ9BY66 1539 aa12.63□□□□□ -0.39
VDAC3-206ENST00000521158 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
VDAC3-206ENST00000521158 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
VDAC3-206ENST00000521158 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
VDAC3-206ENST00000521158 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
VDAC3-206ENST00000521158 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
VDAC3-206ENST00000521158 CFAP44Q96MT7 982 aa12.6□□□□□ -0.39
VDAC3-206ENST00000521158 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
VDAC3-206ENST00000521158 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
VDAC3-206ENST00000521158 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
VDAC3-206ENST00000521158 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
VDAC3-206ENST00000521158 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
VDAC3-206ENST00000521158 KIF3BO15066 747 aa12.55□□□□□ -0.4
VDAC3-206ENST00000521158 ARHGAP23Q9P227 1491 aa12.54□□□□□ -0.4
VDAC3-206ENST00000521158 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
VDAC3-206ENST00000521158 WASHC2CQ9Y4E1 1318 aa12.54□□□□□ -0.4
VDAC3-206ENST00000521158 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
VDAC3-206ENST00000521158 TIAM1Q13009 1591 aa12.53□□□□□ -0.4
VDAC3-206ENST00000521158 ROBO1Q9Y6N7 1651 aa12.53□□□□□ -0.4
VDAC3-206ENST00000521158 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
VDAC3-206ENST00000521158 SLIT1O75093 1534 aa12.52□□□□□ -0.4
VDAC3-206ENST00000521158 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
VDAC3-206ENST00000521158 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
VDAC3-206ENST00000521158 SCAF11Q99590 1463 aaKnown RBP12.52□□□□□ -0.41
VDAC3-206ENST00000521158 ERVK-7P63135 1459 aa12.51□□□□□ -0.41
VDAC3-206ENST00000521158 MAP3K1Q13233 1512 aa12.51□□□□□ -0.41
VDAC3-206ENST00000521158 LTKP29376 864 aa12.5□□□□□ -0.41
VDAC3-206ENST00000521158 POLA2Q14181 598 aa12.5□□□□□ -0.41
VDAC3-206ENST00000521158 ABCC3O15438 1527 aa12.5□□□□□ -0.41
VDAC3-206ENST00000521158 CCDC141Q6ZP82 1450 aa12.48□□□□□ -0.41
VDAC3-206ENST00000521158 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms