RNA–Protein interactions for RNA: ENST00000521074.1

LINC01553-203, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

TSL 1 (best) BASIC

Gene LINC01553, Length 4,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-203ENST00000521074 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
LINC01553-203ENST00000521074 TET3O43151 1660 aa8.49□□□□□ -1.05
LINC01553-203ENST00000521074 CNTLNQ9NXG0 1405 aa8.49□□□□□ -1.05
LINC01553-203ENST00000521074 ARHGAP31Q2M1Z3 1444 aa8.49□□□□□ -1.05
LINC01553-203ENST00000521074 NEURL4Q96JN8 1562 aa8.48□□□□□ -1.05
LINC01553-203ENST00000521074 CAMSAP1Q5T5Y3 1602 aa8.48□□□□□ -1.05
LINC01553-203ENST00000521074 MADDQ8WXG6 1647 aa8.48□□□□□ -1.05
LINC01553-203ENST00000521074 C3P01024 1663 aa8.48□□□□□ -1.05
LINC01553-203ENST00000521074 ATP1B4Q9UN42 357 aaPredicted RBP8.47□□□□□ -1.05
LINC01553-203ENST00000521074 ABCC3O15438 1527 aa8.47□□□□□ -1.05
LINC01553-203ENST00000521074 ZNF644Q9H582 1327 aaPredicted RBP8.46□□□□□ -1.05
LINC01553-203ENST00000521074 RPRD2Q5VT52 1461 aaKnown RBP8.46□□□□□ -1.05
LINC01553-203ENST00000521074 SPATA31D1Q6ZQQ2 1576 aa8.46□□□□□ -1.05
LINC01553-203ENST00000521074 ANKRD30AQ9BXX3 1397 aa8.46□□□□□ -1.06
LINC01553-203ENST00000521074 SPAG9O60271 1321 aaKnown RBP8.46□□□□□ -1.06
LINC01553-203ENST00000521074 EFCAB6Q5THR3 1501 aa8.46□□□□□ -1.06
LINC01553-203ENST00000521074 PIK3C2BO00750 1634 aa8.46□□□□□ -1.06
LINC01553-203ENST00000521074 NPATQ14207 1427 aa8.45□□□□□ -1.06
LINC01553-203ENST00000521074 CLTCQ00610 1675 aaKnown RBP8.45□□□□□ -1.06
LINC01553-203ENST00000521074 NAIPQ13075 1403 aa8.45□□□□□ -1.06
LINC01553-203ENST00000521074 CEP152O94986 1710 aa8.45□□□□□ -1.06
LINC01553-203ENST00000521074 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
LINC01553-203ENST00000521074 RAPGEF3O95398 923 aa8.44□□□□□ -1.06
LINC01553-203ENST00000521074 RIMS1Q86UR5 1692 aaKnown RBP8.44□□□□□ -1.06
LINC01553-203ENST00000521074 KIF15Q9NS87 1388 aa8.43□□□□□ -1.06
LINC01553-203ENST00000521074 PZPP20742 1482 aa8.43□□□□□ -1.06
LINC01553-203ENST00000521074 AFAP1Q8N556 730 aa8.43□□□□□ -1.06
LINC01553-203ENST00000521074 HNRNPMP52272 730 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01553-203ENST00000521074 E9PCH4 1651 aa8.41□□□□□ -1.06
LINC01553-203ENST00000521074 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
LINC01553-203ENST00000521074 ANKRD50Q9ULJ7 1429 aa8.41□□□□□ -1.06
LINC01553-203ENST00000521074 PTPRMP28827 1452 aa8.4□□□□□ -1.06
LINC01553-203ENST00000521074 SPHKAPQ2M3C7 1700 aa8.4□□□□□ -1.07
LINC01553-203ENST00000521074 TSPY4P0CV99 314 aa8.39□□□□□ -1.07
LINC01553-203ENST00000521074 TSPY10P0CW01 314 aa8.39□□□□□ -1.07
LINC01553-203ENST00000521074 NOS1P29475 1434 aa8.39□□□□□ -1.07
LINC01553-203ENST00000521074 PTPRTO14522 1441 aa8.38□□□□□ -1.07
LINC01553-203ENST00000521074 SYNMO15061 1565 aa8.38□□□□□ -1.07
LINC01553-203ENST00000521074 SETD1BQ9UPS6 1966 aaKnown RBP8.38□□□□□ -1.07
LINC01553-203ENST00000521074 TRPM2O94759 1503 aa8.38□□□□□ -1.07
LINC01553-203ENST00000521074 ERVK-7P63135 1459 aa8.36□□□□□ -1.07
LINC01553-203ENST00000521074 NLRP1Q9C000 1473 aa8.36□□□□□ -1.07
LINC01553-203ENST00000521074 UBR1Q8IWV7 1749 aa8.36□□□□□ -1.07
LINC01553-203ENST00000521074 IFT172Q9UG01 1749 aa8.35□□□□□ -1.07
LINC01553-203ENST00000521074 KDM4FA0A1W2PPD8 638 aa8.35□□□□□ -1.07
LINC01553-203ENST00000521074 ZNF777Q9ULD5 760 aaPredicted RBP8.35□□□□□ -1.07
LINC01553-203ENST00000521074 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
LINC01553-203ENST00000521074 SETD5Q9C0A6 1442 aa8.34□□□□□ -1.07
LINC01553-203ENST00000521074 POLR1AO95602 1720 aaPredicted RBP8.34□□□□□ -1.07
LINC01553-203ENST00000521074 UGGT1Q9NYU2 1555 aa8.34□□□□□ -1.07
LINC01553-203ENST00000521074 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
LINC01553-203ENST00000521074 SLIT1O75093 1534 aa8.34□□□□□ -1.08
LINC01553-203ENST00000521074 TMEM131LA2VDJ0 1609 aa8.33□□□□□ -1.08
LINC01553-203ENST00000521074 ADGRB3O60242 1522 aa8.33□□□□□ -1.08
LINC01553-203ENST00000521074 A2ML1A8K2U0 1454 aa8.33□□□□□ -1.08
LINC01553-203ENST00000521074 LMTK3Q96Q04 1460 aa8.33□□□□□ -1.08
LINC01553-203ENST00000521074 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
LINC01553-203ENST00000521074 ZMYM3Q14202 1370 aa8.31□□□□□ -1.08
LINC01553-203ENST00000521074 KANK1Q14678 1352 aa8.31□□□□□ -1.08
LINC01553-203ENST00000521074 CLTCL1P53675 1640 aa8.3□□□□□ -1.08
LINC01553-203ENST00000521074 MED14O60244 1454 aa8.3□□□□□ -1.08
LINC01553-203ENST00000521074 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
LINC01553-203ENST00000521074 KIF1BO60333 1816 aa8.29□□□□□ -1.08
LINC01553-203ENST00000521074 PRAG1Q86YV5 1406 aa8.29□□□□□ -1.08
LINC01553-203ENST00000521074 FAM50AQ14320 339 aaKnown RBP8.28□□□□□ -1.08
LINC01553-203ENST00000521074 PCGF6Q9BYE7 350 aa8.28□□□□□ -1.08
LINC01553-203ENST00000521074 PPLO60437 1756 aa8.28□□□□□ -1.08
LINC01553-203ENST00000521074 PLEKHG5O94827 1062 aa8.28□□□□□ -1.08
LINC01553-203ENST00000521074 DIP2AQ14689 1571 aa8.28□□□□□ -1.08
LINC01553-203ENST00000521074 SETD1AO15047 1707 aaKnown RBP8.28□□□□□ -1.08
LINC01553-203ENST00000521074 PHF23Q9BUL5 403 aaPredicted RBP8.27□□□□□ -1.09
LINC01553-203ENST00000521074 RAB3GAP2Q9H2M9 1393 aa8.27□□□□□ -1.09
LINC01553-203ENST00000521074 MYO5BQ9ULV0 1848 aa8.27□□□□□ -1.09
LINC01553-203ENST00000521074 NEUROD1Q13562 356 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 RRP7BPQ9NSQ0 103 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 ZFYVE9O95405 1425 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 KIAA1210Q9ULL0 1709 aa8.26□□□□□ -1.09
LINC01553-203ENST00000521074 SETBP1Q9Y6X0 1596 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 KIF3BO15066 747 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 LAMC1P11047 1609 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 CENPBP07199 599 aaPredicted RBP8.25□□□□□ -1.09
LINC01553-203ENST00000521074 NWD1Q149M9 1564 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 TNRQ92752 1358 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 NEXMIFQ5QGS0 1516 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 UHRF1BP1Q6BDS2 1440 aa8.25□□□□□ -1.09
LINC01553-203ENST00000521074 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
LINC01553-203ENST00000521074 NRXN3Q9Y4C0 1643 aa8.24□□□□□ -1.09
LINC01553-203ENST00000521074 SPATA31E1Q6ZUB1 1445 aa8.24□□□□□ -1.09
LINC01553-203ENST00000521074 MYOM2P54296 1465 aa8.24□□□□□ -1.09
LINC01553-203ENST00000521074 IQGAP1P46940 1657 aa8.23□□□□□ -1.09
LINC01553-203ENST00000521074 KNDC1Q76NI1 1749 aa8.23□□□□□ -1.09
LINC01553-203ENST00000521074 NUP155O75694 1391 aa8.23□□□□□ -1.09
LINC01553-203ENST00000521074 ANKRD30BQ9BXX2 1392 aa8.22□□□□□ -1.09
LINC01553-203ENST00000521074 ANO8Q9HCE9 1232 aaPredicted RBP8.22□□□□□ -1.09
LINC01553-203ENST00000521074 WASHC2CQ9Y4E1 1318 aa8.22□□□□□ -1.09
LINC01553-203ENST00000521074 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.09
LINC01553-203ENST00000521074 IQSEC2Q5JU85 1478 aa8.21□□□□□ -1.1
LINC01553-203ENST00000521074 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms