RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 RBM33Q96EV2 1170 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-225ENST00000520865 REPIN1Q9BWE0 567 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-225ENST00000520865 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.78□□□□□ -0.68
CTNNA1-225ENST00000520865 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-225ENST00000520865 POTEB2H3BUK9 544 aa10.77□□□□□ -0.69
CTNNA1-225ENST00000520865 PHF14O94880 888 aa10.77□□□□□ -0.69
CTNNA1-225ENST00000520865 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
CTNNA1-225ENST00000520865 PHOX2BQ99453 314 aa10.75□□□□□ -0.69
CTNNA1-225ENST00000520865 EPAS1Q99814 870 aa10.74□□□□□ -0.69
CTNNA1-225ENST00000520865 MAP3K7O43318 606 aa10.73□□□□□ -0.69
CTNNA1-225ENST00000520865 ERICH6Q7L0X2 663 aa10.73□□□□□ -0.69
CTNNA1-225ENST00000520865 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
CTNNA1-225ENST00000520865 ZNF316A6NFI3 1004 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-225ENST00000520865 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
CTNNA1-225ENST00000520865 SLAIN1Q8ND83 568 aa10.72□□□□□ -0.69
CTNNA1-225ENST00000520865 MS4A1P11836 297 aa10.71□□□□□ -0.69
CTNNA1-225ENST00000520865 CECR2Q9BXF3 1484 aa10.71□□□□□ -0.69
CTNNA1-225ENST00000520865 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
CTNNA1-225ENST00000520865 FOSBP53539 338 aa10.7□□□□□ -0.7
CTNNA1-225ENST00000520865 FAM161AQ3B820 660 aa10.7□□□□□ -0.7
CTNNA1-225ENST00000520865 TYW1BQ6NUM6 668 aa10.7□□□□□ -0.7
CTNNA1-225ENST00000520865 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
CTNNA1-225ENST00000520865 CC2D2AQ9P2K1 1620 aa10.69□□□□□ -0.7
CTNNA1-225ENST00000520865 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
CTNNA1-225ENST00000520865 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
CTNNA1-225ENST00000520865 SHROOM4Q9ULL8 1493 aa10.68□□□□□ -0.7
CTNNA1-225ENST00000520865 NUDT7P0C024 238 aa10.67□□□□□ -0.7
CTNNA1-225ENST00000520865 TTLL12Q14166 644 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-225ENST00000520865 ARSIQ5FYB1 569 aa10.67□□□□□ -0.7
CTNNA1-225ENST00000520865 NLRP7Q8WX94 980 aa10.66□□□□□ -0.7
CTNNA1-225ENST00000520865 DDRGK1Q96HY6 314 aa10.65□□□□□ -0.7
CTNNA1-225ENST00000520865 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
CTNNA1-225ENST00000520865 GPR153Q6NV75 609 aa10.64□□□□□ -0.71
CTNNA1-225ENST00000520865 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
CTNNA1-225ENST00000520865 EIF4G1Q04637 1599 aaKnown RBP10.64□□□□□ -0.71
CTNNA1-225ENST00000520865 SUPT5HO00267 1087 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-225ENST00000520865 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
CTNNA1-225ENST00000520865 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
CTNNA1-225ENST00000520865 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
CTNNA1-225ENST00000520865 FBXW7Q969H0 707 aa10.63□□□□□ -0.71
CTNNA1-225ENST00000520865 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
CTNNA1-225ENST00000520865 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
CTNNA1-225ENST00000520865 DAXXQ9UER7 740 aaPredicted RBP10.6□□□□□ -0.71
CTNNA1-225ENST00000520865 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
CTNNA1-225ENST00000520865 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
CTNNA1-225ENST00000520865 METTL3Q86U44 580 aaKnown RBP10.59□□□□□ -0.71
CTNNA1-225ENST00000520865 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
CTNNA1-225ENST00000520865 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
CTNNA1-225ENST00000520865 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
CTNNA1-225ENST00000520865 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
CTNNA1-225ENST00000520865 COL9A1P20849 921 aa10.56□□□□□ -0.72
CTNNA1-225ENST00000520865 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
CTNNA1-225ENST00000520865 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-225ENST00000520865 CLCN1P35523 988 aa10.55□□□□□ -0.72
CTNNA1-225ENST00000520865 GOPCQ9HD26 462 aa10.54□□□□□ -0.72
CTNNA1-225ENST00000520865 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-225ENST00000520865 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-225ENST00000520865 PRSS12P56730 875 aa10.53□□□□□ -0.72
CTNNA1-225ENST00000520865 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
CTNNA1-225ENST00000520865 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
CTNNA1-225ENST00000520865 ZSWIM6Q9HCJ5 1215 aa10.52□□□□□ -0.73
CTNNA1-225ENST00000520865 ZMYND15Q9H091 742 aa10.51□□□□□ -0.73
CTNNA1-225ENST00000520865 RBM27Q9P2N5 1060 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-225ENST00000520865 OATP04181 439 aa10.5□□□□□ -0.73
CTNNA1-225ENST00000520865 SH3D19Q5HYK7 790 aa10.5□□□□□ -0.73
CTNNA1-225ENST00000520865 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
CTNNA1-225ENST00000520865 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-225ENST00000520865 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
CTNNA1-225ENST00000520865 RIMBP2O15034 1052 aa10.47□□□□□ -0.73
CTNNA1-225ENST00000520865 FBXO31Q5XUX0 539 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-225ENST00000520865 EYA1Q99502 592 aa10.47□□□□□ -0.73
CTNNA1-225ENST00000520865 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
CTNNA1-225ENST00000520865 SCUBE2Q9NQ36 999 aa10.47□□□□□ -0.73
CTNNA1-225ENST00000520865 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
CTNNA1-225ENST00000520865 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-225ENST00000520865 SKIV2LQ15477 1246 aaKnown RBP10.44□□□□□ -0.74
CTNNA1-225ENST00000520865 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
CTNNA1-225ENST00000520865 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
CTNNA1-225ENST00000520865 ARXQ96QS3 562 aa10.44□□□□□ -0.74
CTNNA1-225ENST00000520865 POLR3EQ9NVU0 708 aa10.44□□□□□ -0.74
CTNNA1-225ENST00000520865 RCCD1A6NED2 376 aa10.43□□□□□ -0.74
CTNNA1-225ENST00000520865 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
CTNNA1-225ENST00000520865 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
CTNNA1-225ENST00000520865 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
CTNNA1-225ENST00000520865 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
CTNNA1-225ENST00000520865 RBM46Q8TBY0 533 aaKnown RBP10.41□□□□□ -0.74
CTNNA1-225ENST00000520865 PROX2Q3B8N5 592 aa10.4□□□□□ -0.74
CTNNA1-225ENST00000520865 NUDT18Q6ZVK8 323 aa10.4□□□□□ -0.74
CTNNA1-225ENST00000520865 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTNNA1-225ENST00000520865 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
CTNNA1-225ENST00000520865 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
CTNNA1-225ENST00000520865 SMAPO00193 183 aa10.39□□□□□ -0.75
CTNNA1-225ENST00000520865 OTUD5Q96G74 571 aa10.39□□□□□ -0.75
CTNNA1-225ENST00000520865 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-225ENST00000520865 PTPREP23469 700 aa10.38□□□□□ -0.75
CTNNA1-225ENST00000520865 FLIIQ13045 1269 aa10.38□□□□□ -0.75
CTNNA1-225ENST00000520865 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
CTNNA1-225ENST00000520865 MCM6Q14566 821 aa10.37□□□□□ -0.75
CTNNA1-225ENST00000520865 TATDN2Q93075 761 aa10.37□□□□□ -0.75
CTNNA1-225ENST00000520865 CLUAP1Q96AJ1 413 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms