RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MYOM3Q5VTT5 1437 aa31.02■■■□□ 2.56
PABPC1-215ENST00000520804 MIA2Q96PC5 1412 aa31.02■■■□□ 2.56
PABPC1-215ENST00000520804 PLA2R1Q13018 1463 aa31.01■■■□□ 2.56
PABPC1-215ENST00000520804 MAST1Q9Y2H9 1570 aa31.01■■■□□ 2.56
PABPC1-215ENST00000520804 NCKAP5LQ9HCH0 1330 aa31■■■□□ 2.55
PABPC1-215ENST00000520804 LTBP4Q8N2S1 1624 aa30.99■■■□□ 2.55
PABPC1-215ENST00000520804 WASHC2CQ9Y4E1 1318 aa30.98■■■□□ 2.55
PABPC1-215ENST00000520804 A2ML1A8K2U0 1454 aa30.96■■■□□ 2.55
PABPC1-215ENST00000520804 PZPP20742 1482 aa30.96■■■□□ 2.55
PABPC1-215ENST00000520804 PKD2Q13563 968 aa30.96■■■□□ 2.55
PABPC1-215ENST00000520804 TCOF1Q13428 1488 aaKnown RBP30.95■■■□□ 2.55
PABPC1-215ENST00000520804 FBXO31Q5XUX0 539 aaPredicted RBP30.94■■■□□ 2.54
PABPC1-215ENST00000520804 TNRQ92752 1358 aa30.92■■■□□ 2.54
PABPC1-215ENST00000520804 DNMT1P26358 1616 aaKnown RBP30.92■■■□□ 2.54
PABPC1-215ENST00000520804 RNF17Q9BXT8 1623 aaKnown RBP30.91■■■□□ 2.54
PABPC1-215ENST00000520804 APLP2Q06481 763 aa30.9■■■□□ 2.54
PABPC1-215ENST00000520804 EIF2AK4Q9P2K8 1649 aaKnown RBP30.88■■■□□ 2.53
PABPC1-215ENST00000520804 IQSEC2Q5JU85 1478 aa30.88■■■□□ 2.53
PABPC1-215ENST00000520804 ZC3H13Q5T200 1668 aaKnown RBP30.84■■■□□ 2.53
PABPC1-215ENST00000520804 ABCC3O15438 1527 aa30.83■■■□□ 2.53
PABPC1-215ENST00000520804 ZNF335Q9H4Z2 1342 aaPredicted RBP30.83■■■□□ 2.53
PABPC1-215ENST00000520804 PTPN23Q9H3S7 1636 aa30.82■■■□□ 2.52
PABPC1-215ENST00000520804 DUOX2Q9NRD8 1548 aa30.82■■■□□ 2.52
PABPC1-215ENST00000520804 MROH1Q8NDA8 1641 aa30.8■■■□□ 2.52
PABPC1-215ENST00000520804 NLRP1Q9C000 1473 aa30.8■■■□□ 2.52
PABPC1-215ENST00000520804 ABCC5O15440 1437 aa30.8■■■□□ 2.52
PABPC1-215ENST00000520804 CROCC2H7BZ55 1655 aa30.79■■■□□ 2.52
PABPC1-215ENST00000520804 SHANK2Q9UPX8 1470 aa30.79■■■□□ 2.52
PABPC1-215ENST00000520804 POLR1AO95602 1720 aaPredicted RBP30.78■■■□□ 2.52
PABPC1-215ENST00000520804 KIF15Q9NS87 1388 aa30.75■■■□□ 2.51
PABPC1-215ENST00000520804 SPATA31D1Q6ZQQ2 1576 aa30.75■■■□□ 2.51
PABPC1-215ENST00000520804 NEURL4Q96JN8 1562 aa30.75■■■□□ 2.51
PABPC1-215ENST00000520804 FGD6Q6ZV73 1430 aa30.74■■■□□ 2.51
PABPC1-215ENST00000520804 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
PABPC1-215ENST00000520804 UGGT1Q9NYU2 1555 aa30.74■■■□□ 2.51
PABPC1-215ENST00000520804 DAPK1P53355 1430 aa30.73■■■□□ 2.51
PABPC1-215ENST00000520804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.72■■■□□ 2.51
PABPC1-215ENST00000520804 CEP152O94986 1710 aa30.72■■■□□ 2.51
PABPC1-215ENST00000520804 ERBINQ96RT1 1412 aa30.71■■■□□ 2.51
PABPC1-215ENST00000520804 ERVK-7P63135 1459 aa30.7■■■□□ 2.51
PABPC1-215ENST00000520804 ANKLE2Q86XL3 938 aa30.7■■■□□ 2.51
PABPC1-215ENST00000520804 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.51
PABPC1-215ENST00000520804 PRDM15P57071 1507 aaPredicted RBP30.68■■■□□ 2.5
PABPC1-215ENST00000520804 DEPDC5O75140 1603 aa30.64■■■□□ 2.5
PABPC1-215ENST00000520804 MED14O60244 1454 aa30.63■■■□□ 2.49
PABPC1-215ENST00000520804 ARHGAP31Q2M1Z3 1444 aa30.61■■■□□ 2.49
PABPC1-215ENST00000520804 UBAP1LF5GYI3 381 aa30.6■■■□□ 2.49
PABPC1-215ENST00000520804 NPHP4O75161 1426 aaPredicted RBP30.6■■■□□ 2.49
PABPC1-215ENST00000520804 CFAP65Q6ZU64 1925 aaKnown RBP30.6■■■□□ 2.49
PABPC1-215ENST00000520804 ANKRD30AQ9BXX3 1397 aa30.6■■■□□ 2.49
PABPC1-215ENST00000520804 CPS1P31327 1500 aa30.58■■■□□ 2.49
PABPC1-215ENST00000520804 CHIC2Q9UKJ5 165 aa30.58■■■□□ 2.49
PABPC1-215ENST00000520804 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.57■■■□□ 2.48
PABPC1-215ENST00000520804 VWDEQ8N2E2 1590 aa30.56■■■□□ 2.48
PABPC1-215ENST00000520804 UBR1Q8IWV7 1749 aa30.56■■■□□ 2.48
PABPC1-215ENST00000520804 IQGAP1P46940 1657 aa30.55■■■□□ 2.48
PABPC1-215ENST00000520804 KANK1Q14678 1352 aa30.54■■■□□ 2.48
PABPC1-215ENST00000520804 ADGRL2O95490 1459 aa30.5■■■□□ 2.47
PABPC1-215ENST00000520804 DISP3Q9P2K9 1392 aa30.5■■■□□ 2.47
PABPC1-215ENST00000520804 LMTK2Q8IWU2 1503 aa30.49■■■□□ 2.47
PABPC1-215ENST00000520804 FAM50AQ14320 339 aaKnown RBP30.48■■■□□ 2.47
PABPC1-215ENST00000520804 ARHGAP23Q9P227 1491 aa30.45■■■□□ 2.47
PABPC1-215ENST00000520804 SLIT1O75093 1534 aa30.45■■■□□ 2.47
PABPC1-215ENST00000520804 SCAF11Q99590 1463 aaKnown RBP30.44■■■□□ 2.46
PABPC1-215ENST00000520804 PIK3C2BO00750 1634 aa30.43■■■□□ 2.46
PABPC1-215ENST00000520804 TOM1O60784 492 aa30.41■■■□□ 2.46
PABPC1-215ENST00000520804 LTKP29376 864 aa30.4■■■□□ 2.46
PABPC1-215ENST00000520804 TXNDC2Q86VQ3 553 aa30.4■■■□□ 2.46
PABPC1-215ENST00000520804 STRCP1A6NGW2 1772 aa30.39■■■□□ 2.46
PABPC1-215ENST00000520804 EFCAB6Q5THR3 1501 aa30.39■■■□□ 2.46
PABPC1-215ENST00000520804 ANKRD50Q9ULJ7 1429 aa30.38■■■□□ 2.45
PABPC1-215ENST00000520804 KDM5AP29375 1690 aaKnown RBP30.36■■■□□ 2.45
PABPC1-215ENST00000520804 SYNMO15061 1565 aa30.36■■■□□ 2.45
PABPC1-215ENST00000520804 PIP4K2BP78356 416 aa30.35■■■□□ 2.45
PABPC1-215ENST00000520804 IDI1Q13907 227 aa30.35■■■□□ 2.45
PABPC1-215ENST00000520804 EID1Q9Y6B2 187 aa30.35■■■□□ 2.45
PABPC1-215ENST00000520804 TMEM2Q9UHN6 1383 aa30.35■■■□□ 2.45
PABPC1-215ENST00000520804 LRRC7Q96NW7 1537 aa30.34■■■□□ 2.45
PABPC1-215ENST00000520804 NOS1P29475 1434 aa30.34■■■□□ 2.45
PABPC1-215ENST00000520804 SCAF1Q9H7N4 1312 aaKnown RBP30.34■■■□□ 2.45
PABPC1-215ENST00000520804 STAG3Q9UJ98 1225 aa30.34■■■□□ 2.45
PABPC1-215ENST00000520804 ILDR2Q71H61 639 aa30.32■■■□□ 2.44
PABPC1-215ENST00000520804 ALKQ9UM73 1620 aa30.3■■■□□ 2.44
PABPC1-215ENST00000520804 RPRD2Q5VT52 1461 aaKnown RBP30.28■■■□□ 2.44
PABPC1-215ENST00000520804 HSPA1LP34931 641 aa30.28■■■□□ 2.44
PABPC1-215ENST00000520804 SLC52A1Q9NWF4 448 aa30.26■■■□□ 2.43
PABPC1-215ENST00000520804 ADGRB3O60242 1522 aa30.26■■■□□ 2.43
PABPC1-215ENST00000520804 TET3O43151 1660 aa30.24■■■□□ 2.43
PABPC1-215ENST00000520804 ROCK1Q13464 1354 aa30.24■■■□□ 2.43
PABPC1-215ENST00000520804 UNC13BO14795 1591 aa30.24■■■□□ 2.43
PABPC1-215ENST00000520804 GCC2Q8IWJ2 1684 aa30.19■■■□□ 2.42
PABPC1-215ENST00000520804 XIRP1Q702N8 1843 aaKnown RBP30.15■■■□□ 2.42
PABPC1-215ENST00000520804 SOCS7O14512 581 aa30.13■■■□□ 2.41
PABPC1-215ENST00000520804 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
PABPC1-215ENST00000520804 SLC26A8Q96RN1 970 aa30.13■■■□□ 2.41
PABPC1-215ENST00000520804 IQGAP3Q86VI3 1631 aa30.11■■■□□ 2.41
PABPC1-215ENST00000520804 KCNA6P17658 529 aa30.11■■■□□ 2.41
PABPC1-215ENST00000520804 ITGAEP38570 1179 aa30.11■■■□□ 2.41
PABPC1-215ENST00000520804 E9PCH4 1651 aa30.11■■■□□ 2.41
PABPC1-215ENST00000520804 TMEM131LA2VDJ0 1609 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms