RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 CCDC18Q5T9S5 1454 aa13.37□□□□□ -0.27
CSMD1-209ENST00000520630 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
CSMD1-209ENST00000520630 CASKIN1Q8WXD9 1431 aa13.37□□□□□ -0.27
CSMD1-209ENST00000520630 LRRC7Q96NW7 1537 aa13.36□□□□□ -0.27
CSMD1-209ENST00000520630 GGT6Q6P531 493 aa13.36□□□□□ -0.27
CSMD1-209ENST00000520630 SYNMO15061 1565 aa13.36□□□□□ -0.27
CSMD1-209ENST00000520630 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
CSMD1-209ENST00000520630 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
CSMD1-209ENST00000520630 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
CSMD1-209ENST00000520630 ZNF777Q9ULD5 760 aaPredicted RBP13.34□□□□□ -0.27
CSMD1-209ENST00000520630 PZPP20742 1482 aa13.33□□□□□ -0.28
CSMD1-209ENST00000520630 UBR1Q8IWV7 1749 aa13.33□□□□□ -0.28
CSMD1-209ENST00000520630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.32□□□□□ -0.28
CSMD1-209ENST00000520630 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
CSMD1-209ENST00000520630 MBD5Q9P267 1494 aa13.31□□□□□ -0.28
CSMD1-209ENST00000520630 TIAM1Q13009 1591 aa13.31□□□□□ -0.28
CSMD1-209ENST00000520630 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
CSMD1-209ENST00000520630 TNRQ92752 1358 aa13.31□□□□□ -0.28
CSMD1-209ENST00000520630 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
CSMD1-209ENST00000520630 SENP3Q9H4L4 574 aaPredicted RBP13.3□□□□□ -0.28
CSMD1-209ENST00000520630 KDM5DQ9BY66 1539 aa13.29□□□□□ -0.28
CSMD1-209ENST00000520630 CEP152O94986 1710 aa13.29□□□□□ -0.28
CSMD1-209ENST00000520630 PLEKHH2Q8IVE3 1493 aa13.29□□□□□ -0.28
CSMD1-209ENST00000520630 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
CSMD1-209ENST00000520630 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
CSMD1-209ENST00000520630 ZNF644Q9H582 1327 aaPredicted RBP13.28□□□□□ -0.28
CSMD1-209ENST00000520630 FAM135AQ9P2D6 1515 aa13.27□□□□□ -0.29
CSMD1-209ENST00000520630 DHX29Q7Z478 1369 aaKnown RBP13.26□□□□□ -0.29
CSMD1-209ENST00000520630 ANKLE2Q86XL3 938 aa13.26□□□□□ -0.29
CSMD1-209ENST00000520630 MIA2Q96PC5 1412 aa13.26□□□□□ -0.29
CSMD1-209ENST00000520630 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
CSMD1-209ENST00000520630 ROBO1Q9Y6N7 1651 aa13.25□□□□□ -0.29
CSMD1-209ENST00000520630 RTEL1-TNFRSF6BF6WH68 1400 aa13.24□□□□□ -0.29
CSMD1-209ENST00000520630 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
CSMD1-209ENST00000520630 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
CSMD1-209ENST00000520630 THEMISQ8N1K5 641 aaPredicted RBP13.22□□□□□ -0.29
CSMD1-209ENST00000520630 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
CSMD1-209ENST00000520630 KIF3BO15066 747 aa13.2□□□□□ -0.3
CSMD1-209ENST00000520630 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
CSMD1-209ENST00000520630 ABCC3O15438 1527 aa13.19□□□□□ -0.3
CSMD1-209ENST00000520630 PHLPP1O60346 1717 aa13.19□□□□□ -0.3
CSMD1-209ENST00000520630 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
CSMD1-209ENST00000520630 MYO5BQ9ULV0 1848 aa13.17□□□□□ -0.3
CSMD1-209ENST00000520630 SLIT1O75093 1534 aa13.17□□□□□ -0.3
CSMD1-209ENST00000520630 MAP3K1Q13233 1512 aa13.17□□□□□ -0.3
CSMD1-209ENST00000520630 PIK3C2BO00750 1634 aa13.17□□□□□ -0.3
CSMD1-209ENST00000520630 ERVK-7P63135 1459 aa13.16□□□□□ -0.3
CSMD1-209ENST00000520630 FAM135BQ49AJ0 1406 aa13.16□□□□□ -0.3
CSMD1-209ENST00000520630 EIF2AK4Q9P2K8 1649 aaKnown RBP13.16□□□□□ -0.3
CSMD1-209ENST00000520630 WASHC2CQ9Y4E1 1318 aa13.15□□□□□ -0.3
CSMD1-209ENST00000520630 LTKP29376 864 aa13.15□□□□□ -0.3
CSMD1-209ENST00000520630 CAMSAP2Q08AD1 1489 aa13.15□□□□□ -0.3
CSMD1-209ENST00000520630 CCDC141Q6ZP82 1450 aa13.15□□□□□ -0.3
CSMD1-209ENST00000520630 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.3
CSMD1-209ENST00000520630 ARHGEF5Q12774 1597 aa13.15□□□□□ -0.3
CSMD1-209ENST00000520630 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
CSMD1-209ENST00000520630 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
CSMD1-209ENST00000520630 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
CSMD1-209ENST00000520630 TET3O43151 1660 aa13.12□□□□□ -0.31
CSMD1-209ENST00000520630 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
CSMD1-209ENST00000520630 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
CSMD1-209ENST00000520630 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CSMD1-209ENST00000520630 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
CSMD1-209ENST00000520630 CEP162Q5TB80 1403 aa13.1□□□□□ -0.31
CSMD1-209ENST00000520630 NWD1Q149M9 1564 aa13.09□□□□□ -0.31
CSMD1-209ENST00000520630 LRP6O75581 1613 aa13.09□□□□□ -0.31
CSMD1-209ENST00000520630 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
CSMD1-209ENST00000520630 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSMD1-209ENST00000520630 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
CSMD1-209ENST00000520630 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
CSMD1-209ENST00000520630 TXNDC2Q86VQ3 553 aa13.05□□□□□ -0.32
CSMD1-209ENST00000520630 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
CSMD1-209ENST00000520630 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
CSMD1-209ENST00000520630 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.03□□□□□ -0.32
CSMD1-209ENST00000520630 CHIC1Q5VXU3 224 aa13.03□□□□□ -0.32
CSMD1-209ENST00000520630 LRRC9Q6ZRR7 1453 aa13.02□□□□□ -0.33
CSMD1-209ENST00000520630 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
CSMD1-209ENST00000520630 ARHGAP31Q2M1Z3 1444 aa13.01□□□□□ -0.33
CSMD1-209ENST00000520630 DIP2AQ14689 1571 aa13.01□□□□□ -0.33
CSMD1-209ENST00000520630 RSPH4AQ5TD94 716 aa13□□□□□ -0.33
CSMD1-209ENST00000520630 EFCAB6Q5THR3 1501 aa12.99□□□□□ -0.33
CSMD1-209ENST00000520630 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
CSMD1-209ENST00000520630 JCADQ9P266 1359 aa12.99□□□□□ -0.33
CSMD1-209ENST00000520630 KCNA6P17658 529 aa12.99□□□□□ -0.33
CSMD1-209ENST00000520630 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
CSMD1-209ENST00000520630 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
CSMD1-209ENST00000520630 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
CSMD1-209ENST00000520630 DUOX2Q9NRD8 1548 aa12.97□□□□□ -0.33
CSMD1-209ENST00000520630 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
CSMD1-209ENST00000520630 TRIM52Q96A61 297 aa12.96□□□□□ -0.33
CSMD1-209ENST00000520630 EP400Q96L91 3159 aa12.96□□□□□ -0.33
CSMD1-209ENST00000520630 SLAIN2Q9P270 581 aa12.95□□□□□ -0.34
CSMD1-209ENST00000520630 ADGRB3O60242 1522 aa12.94□□□□□ -0.34
CSMD1-209ENST00000520630 TSPY4P0CV99 314 aa12.94□□□□□ -0.34
CSMD1-209ENST00000520630 TSPY10P0CW01 314 aa12.94□□□□□ -0.34
CSMD1-209ENST00000520630 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
CSMD1-209ENST00000520630 CDK12Q9NYV4 1490 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-209ENST00000520630 IDI1Q13907 227 aa12.93□□□□□ -0.34
CSMD1-209ENST00000520630 EID1Q9Y6B2 187 aa12.93□□□□□ -0.34
CSMD1-209ENST00000520630 FGD6Q6ZV73 1430 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms