RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 CLTCQ00610 1675 aaKnown RBP13.67□□□□□ -0.22
ZNF260-201ENST00000520608 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
ZNF260-201ENST00000520608 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
ZNF260-201ENST00000520608 PTPRTO14522 1441 aa13.66□□□□□ -0.22
ZNF260-201ENST00000520608 NPATQ14207 1427 aa13.66□□□□□ -0.22
ZNF260-201ENST00000520608 ZNF644Q9H582 1327 aaPredicted RBP13.65□□□□□ -0.22
ZNF260-201ENST00000520608 NCOA1Q15788 1441 aa13.65□□□□□ -0.22
ZNF260-201ENST00000520608 CEP162Q5TB80 1403 aa13.65□□□□□ -0.22
ZNF260-201ENST00000520608 GGT6Q6P531 493 aa13.65□□□□□ -0.22
ZNF260-201ENST00000520608 CAMSAP1Q5T5Y3 1602 aa13.64□□□□□ -0.23
ZNF260-201ENST00000520608 ADGBQ8N7X0 1667 aa13.64□□□□□ -0.23
ZNF260-201ENST00000520608 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
ZNF260-201ENST00000520608 SP7Q8TDD2 431 aaPredicted RBP13.63□□□□□ -0.23
ZNF260-201ENST00000520608 MYO3AQ8NEV4 1616 aa13.62□□□□□ -0.23
ZNF260-201ENST00000520608 MBD5Q9P267 1494 aa13.61□□□□□ -0.23
ZNF260-201ENST00000520608 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
ZNF260-201ENST00000520608 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
ZNF260-201ENST00000520608 PTPRKQ15262 1439 aa13.59□□□□□ -0.23
ZNF260-201ENST00000520608 LTBP4Q8N2S1 1624 aa13.59□□□□□ -0.23
ZNF260-201ENST00000520608 NCKAP5LQ9HCH0 1330 aa13.59□□□□□ -0.23
ZNF260-201ENST00000520608 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
ZNF260-201ENST00000520608 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.24
ZNF260-201ENST00000520608 POLA2Q14181 598 aa13.58□□□□□ -0.24
ZNF260-201ENST00000520608 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.24
ZNF260-201ENST00000520608 NCOA2Q15596 1464 aa13.58□□□□□ -0.24
ZNF260-201ENST00000520608 CCDC141Q6ZP82 1450 aa13.58□□□□□ -0.24
ZNF260-201ENST00000520608 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
ZNF260-201ENST00000520608 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
ZNF260-201ENST00000520608 KIF3BO15066 747 aa13.55□□□□□ -0.24
ZNF260-201ENST00000520608 PKD2Q13563 968 aa13.55□□□□□ -0.24
ZNF260-201ENST00000520608 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
ZNF260-201ENST00000520608 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
ZNF260-201ENST00000520608 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
ZNF260-201ENST00000520608 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
ZNF260-201ENST00000520608 A2ML1A8K2U0 1454 aa13.53□□□□□ -0.24
ZNF260-201ENST00000520608 TCOF1Q13428 1488 aaKnown RBP13.53□□□□□ -0.24
ZNF260-201ENST00000520608 DNMT1P26358 1616 aaKnown RBP13.51□□□□□ -0.25
ZNF260-201ENST00000520608 TNRQ92752 1358 aa13.51□□□□□ -0.25
ZNF260-201ENST00000520608 WASHC2CQ9Y4E1 1318 aa13.51□□□□□ -0.25
ZNF260-201ENST00000520608 TSPY4P0CV99 314 aa13.51□□□□□ -0.25
ZNF260-201ENST00000520608 TSPY10P0CW01 314 aa13.51□□□□□ -0.25
ZNF260-201ENST00000520608 RSPH4AQ5TD94 716 aa13.51□□□□□ -0.25
ZNF260-201ENST00000520608 ARHGEF5Q12774 1597 aa13.5□□□□□ -0.25
ZNF260-201ENST00000520608 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
ZNF260-201ENST00000520608 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
ZNF260-201ENST00000520608 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
ZNF260-201ENST00000520608 PZPP20742 1482 aa13.49□□□□□ -0.25
ZNF260-201ENST00000520608 LRRC9Q6ZRR7 1453 aa13.49□□□□□ -0.25
ZNF260-201ENST00000520608 SPATA31D1Q6ZQQ2 1576 aa13.49□□□□□ -0.25
ZNF260-201ENST00000520608 LOC105371045A0A1W2PR82 267 aa13.48□□□□□ -0.25
ZNF260-201ENST00000520608 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
ZNF260-201ENST00000520608 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
ZNF260-201ENST00000520608 ILDR2Q71H61 639 aa13.45□□□□□ -0.26
ZNF260-201ENST00000520608 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
ZNF260-201ENST00000520608 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
ZNF260-201ENST00000520608 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF260-201ENST00000520608 MIA2Q96PC5 1412 aa13.44□□□□□ -0.26
ZNF260-201ENST00000520608 NEURL4Q96JN8 1562 aa13.44□□□□□ -0.26
ZNF260-201ENST00000520608 UGGT1Q9NYU2 1555 aa13.44□□□□□ -0.26
ZNF260-201ENST00000520608 NLRP1Q9C000 1473 aa13.43□□□□□ -0.26
ZNF260-201ENST00000520608 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
ZNF260-201ENST00000520608 KANK4Q5T7N3 995 aaPredicted RBP13.43□□□□□ -0.26
ZNF260-201ENST00000520608 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
ZNF260-201ENST00000520608 MAST1Q9Y2H9 1570 aa13.43□□□□□ -0.26
ZNF260-201ENST00000520608 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
ZNF260-201ENST00000520608 THEMISQ8N1K5 641 aaPredicted RBP13.42□□□□□ -0.26
ZNF260-201ENST00000520608 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
ZNF260-201ENST00000520608 ABCC3O15438 1527 aa13.42□□□□□ -0.26
ZNF260-201ENST00000520608 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
ZNF260-201ENST00000520608 MAP3K1Q13233 1512 aa13.41□□□□□ -0.26
ZNF260-201ENST00000520608 CPS1P31327 1500 aa13.4□□□□□ -0.26
ZNF260-201ENST00000520608 SHANK2Q9UPX8 1470 aa13.4□□□□□ -0.26
ZNF260-201ENST00000520608 PIP4K2BP78356 416 aa13.39□□□□□ -0.27
ZNF260-201ENST00000520608 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
ZNF260-201ENST00000520608 SOCS7O14512 581 aa13.38□□□□□ -0.27
ZNF260-201ENST00000520608 CEP152O94986 1710 aa13.38□□□□□ -0.27
ZNF260-201ENST00000520608 DEPDC5O75140 1603 aa13.38□□□□□ -0.27
ZNF260-201ENST00000520608 MROH1Q8NDA8 1641 aa13.38□□□□□ -0.27
ZNF260-201ENST00000520608 DUOX2Q9NRD8 1548 aa13.38□□□□□ -0.27
ZNF260-201ENST00000520608 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
ZNF260-201ENST00000520608 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
ZNF260-201ENST00000520608 VWDEQ8N2E2 1590 aa13.37□□□□□ -0.27
ZNF260-201ENST00000520608 TOM1O60784 492 aa13.36□□□□□ -0.27
ZNF260-201ENST00000520608 MED14O60244 1454 aa13.36□□□□□ -0.27
ZNF260-201ENST00000520608 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
ZNF260-201ENST00000520608 CROCC2H7BZ55 1655 aa13.35□□□□□ -0.27
ZNF260-201ENST00000520608 PTPN23Q9H3S7 1636 aa13.35□□□□□ -0.27
ZNF260-201ENST00000520608 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
ZNF260-201ENST00000520608 RRP7BPQ9NSQ0 103 aa13.34□□□□□ -0.27
ZNF260-201ENST00000520608 ERBINQ96RT1 1412 aa13.33□□□□□ -0.28
ZNF260-201ENST00000520608 HSPA1LP34931 641 aa13.33□□□□□ -0.28
ZNF260-201ENST00000520608 PRDM15P57071 1507 aaPredicted RBP13.33□□□□□ -0.28
ZNF260-201ENST00000520608 ABCC5O15440 1437 aa13.32□□□□□ -0.28
ZNF260-201ENST00000520608 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
ZNF260-201ENST00000520608 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
ZNF260-201ENST00000520608 DAPK1P53355 1430 aa13.31□□□□□ -0.28
ZNF260-201ENST00000520608 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
ZNF260-201ENST00000520608 HAX1O00165 279 aa13.31□□□□□ -0.28
ZNF260-201ENST00000520608 REM2Q8IYK8 340 aaPredicted RBP13.3□□□□□ -0.28
ZNF260-201ENST00000520608 FGD6Q6ZV73 1430 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms