RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
CTNNA1-224ENST00000520522 TCOF1Q13428 1488 aaKnown RBP14.18□□□□□ -0.14
CTNNA1-224ENST00000520522 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
CTNNA1-224ENST00000520522 KDM5DQ9BY66 1539 aa14.17□□□□□ -0.14
CTNNA1-224ENST00000520522 PKD2Q13563 968 aa14.16□□□□□ -0.14
CTNNA1-224ENST00000520522 A2ML1A8K2U0 1454 aa14.16□□□□□ -0.14
CTNNA1-224ENST00000520522 MSH5O43196 834 aa14.15□□□□□ -0.14
CTNNA1-224ENST00000520522 MAST1Q9Y2H9 1570 aa14.14□□□□□ -0.15
CTNNA1-224ENST00000520522 PZPP20742 1482 aa14.14□□□□□ -0.15
CTNNA1-224ENST00000520522 KIF3BO15066 747 aa14.14□□□□□ -0.15
CTNNA1-224ENST00000520522 NCKAP5LQ9HCH0 1330 aa14.14□□□□□ -0.15
CTNNA1-224ENST00000520522 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 TNRQ92752 1358 aa14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 TSPY4P0CV99 314 aa14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 TSPY10P0CW01 314 aa14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 MIA2Q96PC5 1412 aa14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 RNF17Q9BXT8 1623 aaKnown RBP14.12□□□□□ -0.15
CTNNA1-224ENST00000520522 MYOM3Q5VTT5 1437 aa14.11□□□□□ -0.15
CTNNA1-224ENST00000520522 LOC105371045A0A1W2PR82 267 aa14.1□□□□□ -0.15
CTNNA1-224ENST00000520522 WASHC2CQ9Y4E1 1318 aa14.1□□□□□ -0.15
CTNNA1-224ENST00000520522 EIF2AK4Q9P2K8 1649 aaKnown RBP14.09□□□□□ -0.15
CTNNA1-224ENST00000520522 NLRP1Q9C000 1473 aa14.09□□□□□ -0.15
CTNNA1-224ENST00000520522 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
CTNNA1-224ENST00000520522 ZC3H13Q5T200 1668 aaKnown RBP14.08□□□□□ -0.16
CTNNA1-224ENST00000520522 POLR1AO95602 1720 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-224ENST00000520522 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-224ENST00000520522 FBXO31Q5XUX0 539 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-224ENST00000520522 ABCC3O15438 1527 aa14.06□□□□□ -0.16
CTNNA1-224ENST00000520522 NEURL4Q96JN8 1562 aa14.06□□□□□ -0.16
CTNNA1-224ENST00000520522 SHANK2Q9UPX8 1470 aa14.05□□□□□ -0.16
CTNNA1-224ENST00000520522 MROH1Q8NDA8 1641 aa14.04□□□□□ -0.16
CTNNA1-224ENST00000520522 DUOX2Q9NRD8 1548 aa14.04□□□□□ -0.16
CTNNA1-224ENST00000520522 SPATA31D1Q6ZQQ2 1576 aa14.04□□□□□ -0.16
CTNNA1-224ENST00000520522 UGGT1Q9NYU2 1555 aa14.04□□□□□ -0.16
CTNNA1-224ENST00000520522 DEPDC5O75140 1603 aa14.02□□□□□ -0.16
CTNNA1-224ENST00000520522 CPS1P31327 1500 aa14.02□□□□□ -0.16
CTNNA1-224ENST00000520522 MED14O60244 1454 aa14.02□□□□□ -0.16
CTNNA1-224ENST00000520522 THEMISQ8N1K5 641 aaPredicted RBP14.02□□□□□ -0.17
CTNNA1-224ENST00000520522 CROCC2H7BZ55 1655 aa14.01□□□□□ -0.17
CTNNA1-224ENST00000520522 ERVK-7P63135 1459 aa14.01□□□□□ -0.17
CTNNA1-224ENST00000520522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.01□□□□□ -0.17
CTNNA1-224ENST00000520522 PRDM15P57071 1507 aaPredicted RBP14□□□□□ -0.17
CTNNA1-224ENST00000520522 ERBINQ96RT1 1412 aa14□□□□□ -0.17
CTNNA1-224ENST00000520522 DISP3Q9P2K9 1392 aa14□□□□□ -0.17
CTNNA1-224ENST00000520522 ANKLE2Q86XL3 938 aa14□□□□□ -0.17
CTNNA1-224ENST00000520522 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
CTNNA1-224ENST00000520522 KIF15Q9NS87 1388 aa13.99□□□□□ -0.17
CTNNA1-224ENST00000520522 UBAP1LF5GYI3 381 aa13.99□□□□□ -0.17
CTNNA1-224ENST00000520522 ABCC5O15440 1437 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 CEP152O94986 1710 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 APLP2Q06481 763 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 ARHGAP31Q2M1Z3 1444 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
CTNNA1-224ENST00000520522 DAPK1P53355 1430 aa13.97□□□□□ -0.17
CTNNA1-224ENST00000520522 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
CTNNA1-224ENST00000520522 UBR1Q8IWV7 1749 aa13.94□□□□□ -0.18
CTNNA1-224ENST00000520522 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
CTNNA1-224ENST00000520522 ANKRD30AQ9BXX3 1397 aa13.92□□□□□ -0.18
CTNNA1-224ENST00000520522 ARHGAP23Q9P227 1491 aa13.92□□□□□ -0.18
CTNNA1-224ENST00000520522 SLIT1O75093 1534 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 TOM1O60784 492 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 ILDR2Q71H61 639 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 RRP7BPQ9NSQ0 103 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 KANK1Q14678 1352 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 SCAF11Q99590 1463 aaKnown RBP13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 SYNMO15061 1565 aa13.91□□□□□ -0.18
CTNNA1-224ENST00000520522 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
CTNNA1-224ENST00000520522 ADGRL2O95490 1459 aa13.89□□□□□ -0.19
CTNNA1-224ENST00000520522 KDM5AP29375 1690 aaKnown RBP13.88□□□□□ -0.19
CTNNA1-224ENST00000520522 STRCP1A6NGW2 1772 aa13.87□□□□□ -0.19
CTNNA1-224ENST00000520522 LRRC7Q96NW7 1537 aa13.87□□□□□ -0.19
CTNNA1-224ENST00000520522 SOCS7O14512 581 aa13.87□□□□□ -0.19
CTNNA1-224ENST00000520522 PIK3C2BO00750 1634 aa13.86□□□□□ -0.19
CTNNA1-224ENST00000520522 ALKQ9UM73 1620 aa13.86□□□□□ -0.19
CTNNA1-224ENST00000520522 EFCAB6Q5THR3 1501 aa13.86□□□□□ -0.19
CTNNA1-224ENST00000520522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.86□□□□□ -0.199e-8■□□□□ 9.6
CTNNA1-224ENST00000520522 PIP4K2BP78356 416 aa13.85□□□□□ -0.19
CTNNA1-224ENST00000520522 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
CTNNA1-224ENST00000520522 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-224ENST00000520522 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
CTNNA1-224ENST00000520522 NOS1P29475 1434 aa13.84□□□□□ -0.19
CTNNA1-224ENST00000520522 LTKP29376 864 aa13.84□□□□□ -0.19
CTNNA1-224ENST00000520522 HSPA1LP34931 641 aa13.84□□□□□ -0.19
CTNNA1-224ENST00000520522 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.2
CTNNA1-224ENST00000520522 EID1Q9Y6B2 187 aa13.83□□□□□ -0.2
CTNNA1-224ENST00000520522 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
CTNNA1-224ENST00000520522 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-224ENST00000520522 ADGRB3O60242 1522 aa13.81□□□□□ -0.2
CTNNA1-224ENST00000520522 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
CTNNA1-224ENST00000520522 IDI1Q13907 227 aa13.8□□□□□ -0.2
CTNNA1-224ENST00000520522 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
CTNNA1-224ENST00000520522 FAM50AQ14320 339 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-224ENST00000520522 SLC52A1Q9NWF4 448 aa13.78□□□□□ -0.2
CTNNA1-224ENST00000520522 TET3O43151 1660 aa13.78□□□□□ -0.2
CTNNA1-224ENST00000520522 UNC13BO14795 1591 aa13.77□□□□□ -0.21
CTNNA1-224ENST00000520522 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
CTNNA1-224ENST00000520522 GCC2Q8IWJ2 1684 aa13.75□□□□□ -0.21
CTNNA1-224ENST00000520522 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms