RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MAST1Q9Y2H9 1570 aa25.17■■□□□ 1.62
IGHV3-42-201ENST00000520410 CEP170BQ9Y4F5 1589 aaPredicted RBP25.17■■□□□ 1.62
IGHV3-42-201ENST00000520410 PTPN23Q9H3S7 1636 aa25.15■■□□□ 1.62
IGHV3-42-201ENST00000520410 PTPRTO14522 1441 aa25.14■■□□□ 1.62
IGHV3-42-201ENST00000520410 ZNF142P52746 1687 aaPredicted RBP25.13■■□□□ 1.61
IGHV3-42-201ENST00000520410 NCKAP5LQ9HCH0 1330 aa25.13■■□□□ 1.61
IGHV3-42-201ENST00000520410 FBXO31Q5XUX0 539 aaPredicted RBP25.12■■□□□ 1.61
IGHV3-42-201ENST00000520410 TNRQ92752 1358 aa25.12■■□□□ 1.61
IGHV3-42-201ENST00000520410 FAM135AQ9P2D6 1515 aa25.11■■□□□ 1.61
IGHV3-42-201ENST00000520410 PZPP20742 1482 aa25.09■■□□□ 1.61
IGHV3-42-201ENST00000520410 FGD6Q6ZV73 1430 aa25.08■■□□□ 1.61
IGHV3-42-201ENST00000520410 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
IGHV3-42-201ENST00000520410 EIF2AK4Q9P2K8 1649 aaKnown RBP25.07■■□□□ 1.6
IGHV3-42-201ENST00000520410 A2ML1A8K2U0 1454 aa25.07■■□□□ 1.6
IGHV3-42-201ENST00000520410 CROCC2H7BZ55 1655 aa25.07■■□□□ 1.6
IGHV3-42-201ENST00000520410 DUOX2Q9NRD8 1548 aa25.07■■□□□ 1.6
IGHV3-42-201ENST00000520410 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
IGHV3-42-201ENST00000520410 RNF17Q9BXT8 1623 aaKnown RBP25.05■■□□□ 1.6
IGHV3-42-201ENST00000520410 CHIC2Q9UKJ5 165 aa25.05■■□□□ 1.6
IGHV3-42-201ENST00000520410 ABCC5O15440 1437 aa25.04■■□□□ 1.6
IGHV3-42-201ENST00000520410 DAPK1P53355 1430 aa25.04■■□□□ 1.6
IGHV3-42-201ENST00000520410 PLA2R1Q13018 1463 aa25.04■■□□□ 1.6
IGHV3-42-201ENST00000520410 PKD2Q13563 968 aa25.04■■□□□ 1.6
IGHV3-42-201ENST00000520410 FAM50AQ14320 339 aaKnown RBP25.04■■□□□ 1.6
IGHV3-42-201ENST00000520410 SHANK2Q9UPX8 1470 aa25.03■■□□□ 1.6
IGHV3-42-201ENST00000520410 ZC3H13Q5T200 1668 aaKnown RBP25.03■■□□□ 1.6
IGHV3-42-201ENST00000520410 ABCC3O15438 1527 aa25.02■■□□□ 1.6
IGHV3-42-201ENST00000520410 DNMT1P26358 1616 aaKnown RBP25.02■■□□□ 1.6
IGHV3-42-201ENST00000520410 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.02■■□□□ 1.6
IGHV3-42-201ENST00000520410 CEP152O94986 1710 aa25■■□□□ 1.59
IGHV3-42-201ENST00000520410 TCOF1Q13428 1488 aaKnown RBP24.99■■□□□ 1.59
IGHV3-42-201ENST00000520410 ERBINQ96RT1 1412 aa24.97■■□□□ 1.59
IGHV3-42-201ENST00000520410 ZNF335Q9H4Z2 1342 aaPredicted RBP24.97■■□□□ 1.59
IGHV3-42-201ENST00000520410 ANKRD30AQ9BXX3 1397 aa24.96■■□□□ 1.59
IGHV3-42-201ENST00000520410 NLRP1Q9C000 1473 aa24.96■■□□□ 1.59
IGHV3-42-201ENST00000520410 MROH1Q8NDA8 1641 aa24.95■■□□□ 1.58
IGHV3-42-201ENST00000520410 UGGT1Q9NYU2 1555 aa24.95■■□□□ 1.58
IGHV3-42-201ENST00000520410 KANK1Q14678 1352 aa24.94■■□□□ 1.58
IGHV3-42-201ENST00000520410 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.94■■□□□ 1.58
IGHV3-42-201ENST00000520410 LTBP4Q8N2S1 1624 aa24.94■■□□□ 1.58
IGHV3-42-201ENST00000520410 THEMISQ8N1K5 641 aaPredicted RBP24.93■■□□□ 1.58
IGHV3-42-201ENST00000520410 POLR1AO95602 1720 aaPredicted RBP24.92■■□□□ 1.58
IGHV3-42-201ENST00000520410 ERVK-7P63135 1459 aa24.91■■□□□ 1.58
IGHV3-42-201ENST00000520410 ANKLE2Q86XL3 938 aa24.91■■□□□ 1.58
IGHV3-42-201ENST00000520410 PRDM15P57071 1507 aaPredicted RBP24.9■■□□□ 1.58
IGHV3-42-201ENST00000520410 SPATA31D1Q6ZQQ2 1576 aa24.89■■□□□ 1.58
IGHV3-42-201ENST00000520410 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
IGHV3-42-201ENST00000520410 CFAP65Q6ZU64 1925 aaKnown RBP24.85■■□□□ 1.57
IGHV3-42-201ENST00000520410 NEURL4Q96JN8 1562 aa24.84■■□□□ 1.57
IGHV3-42-201ENST00000520410 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.56
IGHV3-42-201ENST00000520410 STAG3Q9UJ98 1225 aa24.82■■□□□ 1.56
IGHV3-42-201ENST00000520410 DEPDC5O75140 1603 aa24.82■■□□□ 1.56
IGHV3-42-201ENST00000520410 NPHP4O75161 1426 aaPredicted RBP24.81■■□□□ 1.56
IGHV3-42-201ENST00000520410 UBAP1LF5GYI3 381 aa24.81■■□□□ 1.56
IGHV3-42-201ENST00000520410 ITGAEP38570 1179 aa24.8■■□□□ 1.56
IGHV3-42-201ENST00000520410 ADGRL2O95490 1459 aa24.79■■□□□ 1.56
IGHV3-42-201ENST00000520410 SCAF1Q9H7N4 1312 aaKnown RBP24.78■■□□□ 1.56
IGHV3-42-201ENST00000520410 ARHGAP31Q2M1Z3 1444 aa24.77■■□□□ 1.56
IGHV3-42-201ENST00000520410 ANKRD50Q9ULJ7 1429 aa24.76■■□□□ 1.55
IGHV3-42-201ENST00000520410 IQGAP1P46940 1657 aa24.75■■□□□ 1.55
IGHV3-42-201ENST00000520410 UBR1Q8IWV7 1749 aa24.75■■□□□ 1.55
IGHV3-42-201ENST00000520410 CPS1P31327 1500 aa24.72■■□□□ 1.55
IGHV3-42-201ENST00000520410 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
IGHV3-42-201ENST00000520410 EID1Q9Y6B2 187 aa24.71■■□□□ 1.55
IGHV3-42-201ENST00000520410 LMTK2Q8IWU2 1503 aa24.71■■□□□ 1.55
IGHV3-42-201ENST00000520410 MED14O60244 1454 aa24.7■■□□□ 1.55
IGHV3-42-201ENST00000520410 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
IGHV3-42-201ENST00000520410 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
IGHV3-42-201ENST00000520410 SCAF11Q99590 1463 aaKnown RBP24.7■■□□□ 1.54
IGHV3-42-201ENST00000520410 VWDEQ8N2E2 1590 aa24.68■■□□□ 1.54
IGHV3-42-201ENST00000520410 PIP4K2BP78356 416 aa24.68■■□□□ 1.54
IGHV3-42-201ENST00000520410 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
IGHV3-42-201ENST00000520410 SYNMO15061 1565 aa24.63■■□□□ 1.53
IGHV3-42-201ENST00000520410 LTKP29376 864 aa24.63■■□□□ 1.53
IGHV3-42-201ENST00000520410 IDI1Q13907 227 aa24.63■■□□□ 1.53
IGHV3-42-201ENST00000520410 BCANQ96GW7 911 aa24.63■■□□□ 1.53
IGHV3-42-201ENST00000520410 SLIT1O75093 1534 aa24.62■■□□□ 1.53
IGHV3-42-201ENST00000520410 TOM1O60784 492 aa24.62■■□□□ 1.53
IGHV3-42-201ENST00000520410 ARHGAP23Q9P227 1491 aa24.61■■□□□ 1.53
IGHV3-42-201ENST00000520410 TMEM2Q9UHN6 1383 aa24.6■■□□□ 1.53
IGHV3-42-201ENST00000520410 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
IGHV3-42-201ENST00000520410 TET3O43151 1660 aa24.59■■□□□ 1.53
IGHV3-42-201ENST00000520410 ROCK1Q13464 1354 aa24.59■■□□□ 1.53
IGHV3-42-201ENST00000520410 CHGAP10645 457 aaKnown RBP24.59■■□□□ 1.53
IGHV3-42-201ENST00000520410 ADGRB3O60242 1522 aa24.59■■□□□ 1.53
IGHV3-42-201ENST00000520410 UNC13BO14795 1591 aa24.59■■□□□ 1.53
IGHV3-42-201ENST00000520410 NOS1P29475 1434 aa24.58■■□□□ 1.53
IGHV3-42-201ENST00000520410 RPRD2Q5VT52 1461 aaKnown RBP24.57■■□□□ 1.52
IGHV3-42-201ENST00000520410 SLC52A1Q9NWF4 448 aa24.56■■□□□ 1.52
IGHV3-42-201ENST00000520410 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
IGHV3-42-201ENST00000520410 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
IGHV3-42-201ENST00000520410 NUP155O75694 1391 aa24.54■■□□□ 1.52
IGHV3-42-201ENST00000520410 KDM5AP29375 1690 aaKnown RBP24.53■■□□□ 1.52
IGHV3-42-201ENST00000520410 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
IGHV3-42-201ENST00000520410 LRRC7Q96NW7 1537 aa24.52■■□□□ 1.52
IGHV3-42-201ENST00000520410 SLC26A8Q96RN1 970 aa24.51■■□□□ 1.51
IGHV3-42-201ENST00000520410 IQGAP3Q86VI3 1631 aa24.5■■□□□ 1.51
IGHV3-42-201ENST00000520410 E9PCH4 1651 aa24.48■■□□□ 1.51
IGHV3-42-201ENST00000520410 HSPA1LP34931 641 aa24.48■■□□□ 1.51
IGHV3-42-201ENST00000520410 HDGFP51858 240 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms