RNA–Protein interactions for RNA: ENST00000520264.1

TRIM17-208, Transcript of tripartite motif containing 17, humanhuman

TSL 4

Gene TRIM17, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17-208ENST00000520264 LRRC7Q96NW7 1537 aa19.33■□□□□ 0.68
TRIM17-208ENST00000520264 POTEAQ6S8J7 498 aa19.32■□□□□ 0.68
TRIM17-208ENST00000520264 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
TRIM17-208ENST00000520264 ATP7AQ04656 1500 aa19.3■□□□□ 0.68
TRIM17-208ENST00000520264 ZC3H13Q5T200 1668 aaKnown RBP19.3■□□□□ 0.68
TRIM17-208ENST00000520264 MED14O60244 1454 aa19.3■□□□□ 0.68
TRIM17-208ENST00000520264 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
TRIM17-208ENST00000520264 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
TRIM17-208ENST00000520264 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.68
TRIM17-208ENST00000520264 SYCP2Q9BX26 1530 aa19.27■□□□□ 0.68
TRIM17-208ENST00000520264 NPHP4O75161 1426 aaPredicted RBP19.23■□□□□ 0.67
TRIM17-208ENST00000520264 A2MP01023 1474 aa19.22■□□□□ 0.67
TRIM17-208ENST00000520264 ROBO1Q9Y6N7 1651 aa19.19■□□□□ 0.66
TRIM17-208ENST00000520264 PZPP20742 1482 aa19.17■□□□□ 0.66
TRIM17-208ENST00000520264 UGGT1Q9NYU2 1555 aa19.17■□□□□ 0.66
TRIM17-208ENST00000520264 MTUS2Q5JR59 1369 aa19.17■□□□□ 0.66
TRIM17-208ENST00000520264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.17■□□□□ 0.66
TRIM17-208ENST00000520264 TNRQ92752 1358 aa19.16■□□□□ 0.66
TRIM17-208ENST00000520264 FAM135AQ9P2D6 1515 aa19.15■□□□□ 0.66
TRIM17-208ENST00000520264 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
TRIM17-208ENST00000520264 APLP2Q06481 763 aa19.14■□□□□ 0.65
TRIM17-208ENST00000520264 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.65
TRIM17-208ENST00000520264 NLRP1Q9C000 1473 aa19.13■□□□□ 0.65
TRIM17-208ENST00000520264 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
TRIM17-208ENST00000520264 UPF1Q92900 1129 aaKnown RBP eCLIP19.11■□□□□ 0.65
TRIM17-208ENST00000520264 SPAG9O60271 1321 aaKnown RBP19.1■□□□□ 0.65
TRIM17-208ENST00000520264 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
TRIM17-208ENST00000520264 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
TRIM17-208ENST00000520264 PHLPP1O60346 1717 aa19.08■□□□□ 0.65
TRIM17-208ENST00000520264 UBR1Q8IWV7 1749 aa19.08■□□□□ 0.65
TRIM17-208ENST00000520264 GGT6Q6P531 493 aa19.07■□□□□ 0.64
TRIM17-208ENST00000520264 MAP3K1Q13233 1512 aa19.06■□□□□ 0.64
TRIM17-208ENST00000520264 FBXO31Q5XUX0 539 aaPredicted RBP19.04■□□□□ 0.64
TRIM17-208ENST00000520264 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
TRIM17-208ENST00000520264 KIAA1107Q9UPP5 1409 aa19.03■□□□□ 0.64
TRIM17-208ENST00000520264 GPATCH8Q9UKJ3 1502 aaKnown RBP19.02■□□□□ 0.64
TRIM17-208ENST00000520264 COL16A1Q07092 1604 aaPredicted RBP19.02■□□□□ 0.64
TRIM17-208ENST00000520264 CCNB3Q8WWL7 1395 aa19.02■□□□□ 0.64
TRIM17-208ENST00000520264 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
TRIM17-208ENST00000520264 MIA2Q96PC5 1412 aa19■□□□□ 0.63
TRIM17-208ENST00000520264 LRP6O75581 1613 aa19■□□□□ 0.63
TRIM17-208ENST00000520264 NCOA2Q15596 1464 aa18.99■□□□□ 0.63
TRIM17-208ENST00000520264 THEMISQ8N1K5 641 aaPredicted RBP18.99■□□□□ 0.63
TRIM17-208ENST00000520264 KANK4Q5T7N3 995 aaPredicted RBP18.98■□□□□ 0.63
TRIM17-208ENST00000520264 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
TRIM17-208ENST00000520264 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
TRIM17-208ENST00000520264 HNRNPMP52272 730 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRIM17-208ENST00000520264 SHPRHQ149N8 1683 aa18.95■□□□□ 0.62
TRIM17-208ENST00000520264 CFDP1Q9UEE9 299 aaPredicted RBP18.95■□□□□ 0.62
TRIM17-208ENST00000520264 CDK12Q9NYV4 1490 aaPredicted RBP18.94■□□□□ 0.62
TRIM17-208ENST00000520264 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
TRIM17-208ENST00000520264 CFAP65Q6ZU64 1925 aaKnown RBP18.93■□□□□ 0.62
TRIM17-208ENST00000520264 SLIT1O75093 1534 aa18.93■□□□□ 0.62
TRIM17-208ENST00000520264 EP400Q96L91 3159 aa18.92■□□□□ 0.62
TRIM17-208ENST00000520264 JCADQ9P266 1359 aa18.91■□□□□ 0.62
TRIM17-208ENST00000520264 NWD1Q149M9 1564 aa18.89■□□□□ 0.62
TRIM17-208ENST00000520264 DHX29Q7Z478 1369 aaKnown RBP18.89■□□□□ 0.61
TRIM17-208ENST00000520264 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
TRIM17-208ENST00000520264 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
TRIM17-208ENST00000520264 MBD5Q9P267 1494 aa18.89■□□□□ 0.61
TRIM17-208ENST00000520264 CEP152O94986 1710 aa18.88■□□□□ 0.61
TRIM17-208ENST00000520264 TRIM52Q96A61 297 aa18.88■□□□□ 0.61
TRIM17-208ENST00000520264 ABCC3O15438 1527 aa18.87■□□□□ 0.61
TRIM17-208ENST00000520264 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
TRIM17-208ENST00000520264 KDM5AP29375 1690 aaKnown RBP18.85■□□□□ 0.61
TRIM17-208ENST00000520264 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
TRIM17-208ENST00000520264 MYOM3Q5VTT5 1437 aa18.84■□□□□ 0.61
TRIM17-208ENST00000520264 MROH1Q8NDA8 1641 aa18.84■□□□□ 0.61
TRIM17-208ENST00000520264 SETBP1Q9Y6X0 1596 aa18.84■□□□□ 0.61
TRIM17-208ENST00000520264 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
TRIM17-208ENST00000520264 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
TRIM17-208ENST00000520264 FGD6Q6ZV73 1430 aa18.82■□□□□ 0.6
TRIM17-208ENST00000520264 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
TRIM17-208ENST00000520264 ZNF644Q9H582 1327 aaPredicted RBP18.81■□□□□ 0.6
TRIM17-208ENST00000520264 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
TRIM17-208ENST00000520264 WASHC2CQ9Y4E1 1318 aa18.8■□□□□ 0.6
TRIM17-208ENST00000520264 ZNF772Q68DY9 489 aaPredicted RBP18.8■□□□□ 0.6
TRIM17-208ENST00000520264 PPARGC1BQ86YN6 1023 aaKnown RBP18.8■□□□□ 0.6
TRIM17-208ENST00000520264 RGS12O14924 1447 aa18.8■□□□□ 0.6
TRIM17-208ENST00000520264 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
TRIM17-208ENST00000520264 KIF3BO15066 747 aa18.79■□□□□ 0.6
TRIM17-208ENST00000520264 EIF2AK4Q9P2K8 1649 aaKnown RBP18.78■□□□□ 0.6
TRIM17-208ENST00000520264 TET3O43151 1660 aa18.78■□□□□ 0.6
TRIM17-208ENST00000520264 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
TRIM17-208ENST00000520264 LTKP29376 864 aa18.77■□□□□ 0.6
TRIM17-208ENST00000520264 SPATA31A6Q5VVP1 1343 aa18.76■□□□□ 0.59
TRIM17-208ENST00000520264 CCDC141Q6ZP82 1450 aa18.75■□□□□ 0.59
TRIM17-208ENST00000520264 CHD2O14647 1828 aaKnown RBP18.74■□□□□ 0.59
TRIM17-208ENST00000520264 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
TRIM17-208ENST00000520264 LRP5O75197 1615 aa18.73■□□□□ 0.59
TRIM17-208ENST00000520264 RXRBP28702 533 aa18.72■□□□□ 0.59
TRIM17-208ENST00000520264 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
TRIM17-208ENST00000520264 MEX3CQ5U5Q3 659 aaKnown RBP18.69■□□□□ 0.58
TRIM17-208ENST00000520264 MSH6P52701 1360 aa18.68■□□□□ 0.58
TRIM17-208ENST00000520264 TSPY4P0CV99 314 aa18.68■□□□□ 0.58
TRIM17-208ENST00000520264 TSPY10P0CW01 314 aa18.68■□□□□ 0.58
TRIM17-208ENST00000520264 FAM50AQ14320 339 aaKnown RBP18.68■□□□□ 0.58
TRIM17-208ENST00000520264 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
TRIM17-208ENST00000520264 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
TRIM17-208ENST00000520264 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms