RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 C19orf67A6NJJ6 358 aa8.5□□□□□ -1.05
CTNNA1-220ENST00000520260 REREQ9P2R6 1566 aa8.5□□□□□ -1.05
CTNNA1-220ENST00000520260 PTPN23Q9H3S7 1636 aa8.5□□□□□ -1.05
CTNNA1-220ENST00000520260 HNRNPMP52272 730 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-220ENST00000520260 TCOF1Q13428 1488 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-220ENST00000520260 ADGBQ8N7X0 1667 aa8.49□□□□□ -1.05
CTNNA1-220ENST00000520260 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
CTNNA1-220ENST00000520260 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
CTNNA1-220ENST00000520260 AFAP1Q8N556 730 aa8.48□□□□□ -1.05
CTNNA1-220ENST00000520260 CNTLNQ9NXG0 1405 aa8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 TRAPPC8Q9Y2L5 1435 aa8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 COL17A1Q9UMD9 1497 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 MAST1Q9Y2H9 1570 aa8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 KANK1Q14678 1352 aa8.47□□□□□ -1.05
CTNNA1-220ENST00000520260 A2MP01023 1474 aa8.46□□□□□ -1.05
CTNNA1-220ENST00000520260 AGLP35573 1532 aa8.46□□□□□ -1.05
CTNNA1-220ENST00000520260 PLXNC1O60486 1568 aa8.46□□□□□ -1.06
CTNNA1-220ENST00000520260 DNMT1P26358 1616 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-220ENST00000520260 DAPK1P53355 1430 aa8.46□□□□□ -1.06
CTNNA1-220ENST00000520260 ERBINQ96RT1 1412 aa8.46□□□□□ -1.06
CTNNA1-220ENST00000520260 MBD5Q9P267 1494 aa8.45□□□□□ -1.06
CTNNA1-220ENST00000520260 DUOX2Q9NRD8 1548 aa8.45□□□□□ -1.06
CTNNA1-220ENST00000520260 DIP2CQ9Y2E4 1556 aa8.45□□□□□ -1.06
CTNNA1-220ENST00000520260 PCGF6Q9BYE7 350 aa8.44□□□□□ -1.06
CTNNA1-220ENST00000520260 ROCK1Q13464 1354 aa8.44□□□□□ -1.06
CTNNA1-220ENST00000520260 DHX29Q7Z478 1369 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-220ENST00000520260 ARHGEF12Q9NZN5 1544 aa8.44□□□□□ -1.06
CTNNA1-220ENST00000520260 CROCC2H7BZ55 1655 aa8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 POTEIP0CG38 1075 aa8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 ZNF644Q9H582 1327 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 KIF15Q9NS87 1388 aa8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 RRBP1Q9P2E9 1410 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 YEATS2Q9ULM3 1422 aa8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 EIF2AK4Q9P2K8 1649 aaKnown RBP8.43□□□□□ -1.06
CTNNA1-220ENST00000520260 PRKAR2AP13861 404 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-220ENST00000520260 ABCA6Q8N139 1617 aa8.42□□□□□ -1.06
CTNNA1-220ENST00000520260 KIDINS220Q9ULH0 1771 aa8.42□□□□□ -1.06
CTNNA1-220ENST00000520260 ADGRL2O95490 1459 aa8.41□□□□□ -1.06
CTNNA1-220ENST00000520260 BCORL1Q5H9F3 1711 aa8.4□□□□□ -1.06
CTNNA1-220ENST00000520260 ABCC5O15440 1437 aa8.4□□□□□ -1.06
CTNNA1-220ENST00000520260 WASHC2CQ9Y4E1 1318 aa8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 KIF3BO15066 747 aa8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 MLECQ14165 292 aa8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 GGT6Q6P531 493 aa8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 ZBTB12Q9Y330 459 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 ZC3H13Q5T200 1668 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 KDM5DQ9BY66 1539 aa8.39□□□□□ -1.07
CTNNA1-220ENST00000520260 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
CTNNA1-220ENST00000520260 ITGAEP38570 1179 aa8.38□□□□□ -1.07
CTNNA1-220ENST00000520260 RRP7BPQ9NSQ0 103 aa8.38□□□□□ -1.07
CTNNA1-220ENST00000520260 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 POTEMA6NI47 508 aa8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 CHIC2Q9UKJ5 165 aa8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
CTNNA1-220ENST00000520260 ADAMTSL3P82987 1691 aa8.36□□□□□ -1.07
CTNNA1-220ENST00000520260 NPATQ14207 1427 aa8.36□□□□□ -1.07
CTNNA1-220ENST00000520260 RNF17Q9BXT8 1623 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-220ENST00000520260 PTPRMP28827 1452 aa8.35□□□□□ -1.07
CTNNA1-220ENST00000520260 MADDQ8WXG6 1647 aa8.35□□□□□ -1.07
CTNNA1-220ENST00000520260 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.07
CTNNA1-220ENST00000520260 ZEB1P37275 1124 aaPredicted RBP8.34□□□□□ -1.07
CTNNA1-220ENST00000520260 HFM1A2PYH4 1435 aa8.34□□□□□ -1.07
CTNNA1-220ENST00000520260 UHRF1BP1Q6BDS2 1440 aa8.34□□□□□ -1.07
CTNNA1-220ENST00000520260 PRDM15P57071 1507 aaPredicted RBP8.34□□□□□ -1.08
CTNNA1-220ENST00000520260 RPRD2Q5VT52 1461 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-220ENST00000520260 KDM4FA0A1W2PPD8 638 aa8.32□□□□□ -1.08
CTNNA1-220ENST00000520260 TRIM26Q12899 539 aaPredicted RBP8.32□□□□□ -1.08
CTNNA1-220ENST00000520260 ZMYM3Q14202 1370 aa8.32□□□□□ -1.08
CTNNA1-220ENST00000520260 PZPP20742 1482 aa8.32□□□□□ -1.08
CTNNA1-220ENST00000520260 GCC2Q8IWJ2 1684 aa8.31□□□□□ -1.08
CTNNA1-220ENST00000520260 POTEGQ6S5H5 508 aa8.31□□□□□ -1.08
CTNNA1-220ENST00000520260 DEPDC5O75140 1603 aa8.31□□□□□ -1.08
CTNNA1-220ENST00000520260 ARHGAP31Q2M1Z3 1444 aa8.3□□□□□ -1.08
CTNNA1-220ENST00000520260 HDGFP51858 240 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-220ENST00000520260 STAG3Q9UJ98 1225 aa8.3□□□□□ -1.08
CTNNA1-220ENST00000520260 NLRP1Q9C000 1473 aa8.3□□□□□ -1.08
CTNNA1-220ENST00000520260 CLTCQ00610 1675 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-220ENST00000520260 ABCC3O15438 1527 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 LMTK2Q8IWU2 1503 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 TRIM52Q96A61 297 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 NUP155O75694 1391 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 UNC13BO14795 1591 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 PREX1Q8TCU6 1659 aa8.29□□□□□ -1.08
CTNNA1-220ENST00000520260 SETD1BQ9UPS6 1966 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-220ENST00000520260 TNRQ92752 1358 aa8.28□□□□□ -1.08
CTNNA1-220ENST00000520260 CAMSAP1Q5T5Y3 1602 aa8.28□□□□□ -1.08
CTNNA1-220ENST00000520260 NAIPQ13075 1403 aa8.28□□□□□ -1.08
CTNNA1-220ENST00000520260 SETD5Q9C0A6 1442 aa8.28□□□□□ -1.08
CTNNA1-220ENST00000520260 MYCNP04198 464 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 THEMISQ8N1K5 641 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 EFCAB6Q5THR3 1501 aa8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 TET3O43151 1660 aa8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 C3P01024 1663 aa8.27□□□□□ -1.09
CTNNA1-220ENST00000520260 IQGAP3Q86VI3 1631 aa8.26□□□□□ -1.09
CTNNA1-220ENST00000520260 OTUD5Q96G74 571 aa8.25□□□□□ -1.09
CTNNA1-220ENST00000520260 SLC4A1APQ9BWU0 796 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms