RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 KDM5CP41229 1560 aa38.15■■■■□ 3.7
COL13A1-212ENST00000520133 HIRIP3Q9BW71 556 aaPredicted RBP38.15■■■■□ 3.7
COL13A1-212ENST00000520133 DHX29Q7Z478 1369 aaKnown RBP38.14■■■■□ 3.7
COL13A1-212ENST00000520133 NBPF8Q3BBV2 869 aa38.12■■■■□ 3.69
COL13A1-212ENST00000520133 CCDC144AA2RUR9 1427 aa38.12■■■■□ 3.69
COL13A1-212ENST00000520133 EIF4G2P78344 907 aaKnown RBP eCLIP38.1■■■■□ 3.69
COL13A1-212ENST00000520133 ATP10AO60312 1499 aa38.08■■■■□ 3.69
COL13A1-212ENST00000520133 MLH3Q9UHC1 1453 aa38.08■■■■□ 3.69
COL13A1-212ENST00000520133 KANK1Q14678 1352 aa38.06■■■■□ 3.68
COL13A1-212ENST00000520133 HECW2Q9P2P5 1572 aa38.06■■■■□ 3.68
COL13A1-212ENST00000520133 PLA2R1Q13018 1463 aa38.04■■■■□ 3.68
COL13A1-212ENST00000520133 HSPA5P11021 654 aaKnown RBP38.03■■■■□ 3.68
COL13A1-212ENST00000520133 KIF3BO15066 747 aa38.01■■■■□ 3.68
COL13A1-212ENST00000520133 DDX10Q13206 875 aaKnown RBP38.01■■■■□ 3.68
COL13A1-212ENST00000520133 UHRF1BP1Q6BDS2 1440 aa38.01■■■■□ 3.68
COL13A1-212ENST00000520133 TET3O43151 1660 aa38■■■■□ 3.67
COL13A1-212ENST00000520133 VWDEQ8N2E2 1590 aa37.99■■■■□ 3.67
COL13A1-212ENST00000520133 A2MP01023 1474 aa37.99■■■■□ 3.67
COL13A1-212ENST00000520133 E9PCH4 1651 aa37.99■■■■□ 3.67
COL13A1-212ENST00000520133 PRDM15P57071 1507 aaPredicted RBP37.99■■■■□ 3.67
COL13A1-212ENST00000520133 DIP2BQ9P265 1576 aa37.98■■■■□ 3.67
COL13A1-212ENST00000520133 MROH1Q8NDA8 1641 aa37.93■■■■□ 3.66
COL13A1-212ENST00000520133 FAM69CQ0P6D2 419 aa37.91■■■■□ 3.66
COL13A1-212ENST00000520133 ZNF326Q5BKZ1 582 aaKnown RBP37.91■■■■□ 3.66
COL13A1-212ENST00000520133 RICTORQ6R327 1708 aa37.91■■■■□ 3.66
COL13A1-212ENST00000520133 DCAF11Q8TEB1 546 aa37.89■■■■□ 3.66
COL13A1-212ENST00000520133 RNF17Q9BXT8 1623 aaKnown RBP37.89■■■■□ 3.66
COL13A1-212ENST00000520133 SPHKAPQ2M3C7 1700 aa37.89■■■■□ 3.66
COL13A1-212ENST00000520133 ABCA6Q8N139 1617 aa37.88■■■■□ 3.65
COL13A1-212ENST00000520133 RALGAPBQ86X10 1494 aa37.88■■■■□ 3.65
COL13A1-212ENST00000520133 RAPGEF3O95398 923 aa37.86■■■■□ 3.65
COL13A1-212ENST00000520133 TRPM2O94759 1503 aa37.86■■■■□ 3.65
COL13A1-212ENST00000520133 SPATA31E1Q6ZUB1 1445 aa37.86■■■■□ 3.65
COL13A1-212ENST00000520133 BCORL1Q5H9F3 1711 aa37.85■■■■□ 3.65
COL13A1-212ENST00000520133 KDM2AQ9Y2K7 1162 aa37.84■■■■□ 3.65
COL13A1-212ENST00000520133 FRMPD1Q5SYB0 1578 aa37.84■■■■□ 3.65
COL13A1-212ENST00000520133 PTPRTO14522 1441 aa37.83■■■■□ 3.65
COL13A1-212ENST00000520133 CENPBP07199 599 aaPredicted RBP37.8■■■■□ 3.64
COL13A1-212ENST00000520133 LMTK2Q8IWU2 1503 aa37.79■■■■□ 3.64
COL13A1-212ENST00000520133 TSPOAP1O95153 1857 aa37.78■■■■□ 3.64
COL13A1-212ENST00000520133 RGL3Q3MIN7 710 aa37.78■■■■□ 3.64
COL13A1-212ENST00000520133 CEP152O94986 1710 aa37.77■■■■□ 3.64
COL13A1-212ENST00000520133 POLR1AO95602 1720 aaPredicted RBP37.77■■■■□ 3.64
COL13A1-212ENST00000520133 WASHC2AQ641Q2 1341 aa37.77■■■■□ 3.64
COL13A1-212ENST00000520133 DIP2CQ9Y2E4 1556 aa37.77■■■■□ 3.64
COL13A1-212ENST00000520133 EFCAB6Q5THR3 1501 aa37.76■■■■□ 3.63
COL13A1-212ENST00000520133 USP47Q96K76 1375 aa37.75■■■■□ 3.63
COL13A1-212ENST00000520133 PRAG1Q86YV5 1406 aa37.74■■■■□ 3.63
COL13A1-212ENST00000520133 PPRC1Q5VV67 1664 aaKnown RBP37.74■■■■□ 3.63
COL13A1-212ENST00000520133 CARD11Q9BXL7 1154 aa37.7■■■■□ 3.63
COL13A1-212ENST00000520133 CLTCL1P53675 1640 aa37.7■■■■□ 3.63
COL13A1-212ENST00000520133 TRPM1Q7Z4N2 1603 aa37.7■■■■□ 3.63
COL13A1-212ENST00000520133 YTHDC1Q96MU7 727 aaKnown RBP37.68■■■■□ 3.62
COL13A1-212ENST00000520133 CCDC7Q96M83 1385 aa37.68■■■■□ 3.62
COL13A1-212ENST00000520133 ZMYM4Q5VZL5 1548 aa37.67■■■■□ 3.62
COL13A1-212ENST00000520133 ANP32CO43423 234 aa37.66■■■■□ 3.62
COL13A1-212ENST00000520133 GGT6Q6P531 493 aa37.65■■■■□ 3.62
COL13A1-212ENST00000520133 ROCK2O75116 1388 aaKnown RBP37.64■■■■□ 3.62
COL13A1-212ENST00000520133 KIF13AQ9H1H9 1805 aa37.64■■■■□ 3.62
COL13A1-212ENST00000520133 NEURL4Q96JN8 1562 aa37.62■■■■□ 3.61
COL13A1-212ENST00000520133 STAC3Q96MF2 364 aa37.61■■■■□ 3.61
COL13A1-212ENST00000520133 C11orf95C9JLR9 678 aaPredicted RBP37.6■■■■□ 3.61
COL13A1-212ENST00000520133 YEATS2Q9ULM3 1422 aa37.6■■■■□ 3.61
COL13A1-212ENST00000520133 KIF1BO60333 1816 aa37.57■■■■□ 3.61
COL13A1-212ENST00000520133 LAMC1P11047 1609 aa37.57■■■■□ 3.6
COL13A1-212ENST00000520133 ABCC3O15438 1527 aa37.56■■■■□ 3.6
COL13A1-212ENST00000520133 WASHC2CQ9Y4E1 1318 aa37.56■■■■□ 3.6
COL13A1-212ENST00000520133 CNTLNQ9NXG0 1405 aa37.55■■■■□ 3.6
COL13A1-212ENST00000520133 KIF7Q2M1P5 1343 aa37.55■■■■□ 3.6
COL13A1-212ENST00000520133 GPRASP1Q5JY77 1395 aa37.54■■■■□ 3.6
COL13A1-212ENST00000520133 ARID4BQ4LE39 1312 aaPredicted RBP37.53■■■■□ 3.6
COL13A1-212ENST00000520133 ZC3H13Q5T200 1668 aaKnown RBP37.51■■■■□ 3.6
COL13A1-212ENST00000520133 CAMSAP1Q5T5Y3 1602 aa37.51■■■■□ 3.6
COL13A1-212ENST00000520133 NPATQ14207 1427 aa37.51■■■■□ 3.59
COL13A1-212ENST00000520133 CCER2I3L3R5 266 aa37.5■■■■□ 3.59
COL13A1-212ENST00000520133 CFAP65Q6ZU64 1925 aaKnown RBP37.49■■■■□ 3.59
COL13A1-212ENST00000520133 MADDQ8WXG6 1647 aa37.47■■■■□ 3.59
COL13A1-212ENST00000520133 UGGT1Q9NYU2 1555 aa37.46■■■■□ 3.59
COL13A1-212ENST00000520133 NBPF1Q3BBV0 1214 aa37.44■■■■□ 3.58
COL13A1-212ENST00000520133 ST20-MTHFSA0A0A6YYL1 179 aa37.43■■■■□ 3.58
COL13A1-212ENST00000520133 REREQ9P2R6 1566 aa37.43■■■■□ 3.58
COL13A1-212ENST00000520133 ARHGAP31Q2M1Z3 1444 aa37.39■■■■□ 3.58
COL13A1-212ENST00000520133 MROH2AA6NES4 1674 aa37.35■■■■□ 3.57
COL13A1-212ENST00000520133 MYOM2P54296 1465 aa37.35■■■■□ 3.57
COL13A1-212ENST00000520133 IFT172Q9UG01 1749 aa37.34■■■■□ 3.57
COL13A1-212ENST00000520133 NOS1P29475 1434 aa37.34■■■■□ 3.57
COL13A1-212ENST00000520133 ADGRB3O60242 1522 aa37.34■■■■□ 3.57
COL13A1-212ENST00000520133 AGLP35573 1532 aa37.34■■■■□ 3.57
COL13A1-212ENST00000520133 KIAA1210Q9ULL0 1709 aa37.33■■■■□ 3.57
COL13A1-212ENST00000520133 SIGLEC1Q9BZZ2 1709 aa37.32■■■■□ 3.56
COL13A1-212ENST00000520133 POLR3GLQ9BT43 218 aa37.28■■■■□ 3.56
COL13A1-212ENST00000520133 COL17A1Q9UMD9 1497 aaPredicted RBP37.26■■■■□ 3.56
COL13A1-212ENST00000520133 PIK3C2BO00750 1634 aa37.25■■■■□ 3.55
COL13A1-212ENST00000520133 PPP6R1Q9UPN7 881 aa37.25■■■■□ 3.55
COL13A1-212ENST00000520133 ARHGEF40Q8TER5 1519 aa37.25■■■■□ 3.55
COL13A1-212ENST00000520133 CHGAP10645 457 aaKnown RBP37.24■■■■□ 3.55
COL13A1-212ENST00000520133 IQGAP1P46940 1657 aa37.24■■■■□ 3.55
COL13A1-212ENST00000520133 SYNMO15061 1565 aa37.23■■■■□ 3.55
COL13A1-212ENST00000520133 PPLO60437 1756 aa37.2■■■■□ 3.54
COL13A1-212ENST00000520133 RPGRIP1LQ68CZ1 1315 aa37.19■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms