RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 PREX2Q70Z35 1606 aa8.22□□□□□ -1.09
AC055854.1-202ENST00000519624 ATP7AQ04656 1500 aa8.22□□□□□ -1.09
AC055854.1-202ENST00000519624 PLXNC1O60486 1568 aa8.22□□□□□ -1.09
AC055854.1-202ENST00000519624 EEA1Q15075 1411 aa8.21□□□□□ -1.09
AC055854.1-202ENST00000519624 PZPP20742 1482 aa8.21□□□□□ -1.09
AC055854.1-202ENST00000519624 PLEKHH2Q8IVE3 1493 aa8.21□□□□□ -1.09
AC055854.1-202ENST00000519624 MEX3CQ5U5Q3 659 aaKnown RBP8.21□□□□□ -1.1
AC055854.1-202ENST00000519624 TRIM52Q96A61 297 aa8.21□□□□□ -1.1
AC055854.1-202ENST00000519624 JCADQ9P266 1359 aa8.21□□□□□ -1.1
AC055854.1-202ENST00000519624 MIA2Q96PC5 1412 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 KDM5DQ9BY66 1539 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 FBXO31Q5XUX0 539 aaPredicted RBP8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 WASHC2CQ9Y4E1 1318 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 IQGAP1P46940 1657 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 CDC42BPBQ9Y5S2 1711 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 KIAA1107Q9UPP5 1409 aa8.2□□□□□ -1.1
AC055854.1-202ENST00000519624 LRRC9Q6ZRR7 1453 aa8.19□□□□□ -1.1
AC055854.1-202ENST00000519624 RXRBP28702 533 aa8.19□□□□□ -1.1
AC055854.1-202ENST00000519624 HNRNPMP52272 730 aaKnown RBP eCLIP8.19□□□□□ -1.1
AC055854.1-202ENST00000519624 SETD1AO15047 1707 aaKnown RBP8.19□□□□□ -1.1
AC055854.1-202ENST00000519624 SYCP2Q9BX26 1530 aa8.19□□□□□ -1.1
AC055854.1-202ENST00000519624 SPATA31A6Q5VVP1 1343 aa8.18□□□□□ -1.1
AC055854.1-202ENST00000519624 CFDP1Q9UEE9 299 aaPredicted RBP8.17□□□□□ -1.1
AC055854.1-202ENST00000519624 ZRANB1Q9UGI0 708 aa8.17□□□□□ -1.1
AC055854.1-202ENST00000519624 CCDC18Q5T9S5 1454 aa8.17□□□□□ -1.1
AC055854.1-202ENST00000519624 KIF3BO15066 747 aa8.16□□□□□ -1.1
AC055854.1-202ENST00000519624 DHX29Q7Z478 1369 aaKnown RBP8.16□□□□□ -1.1
AC055854.1-202ENST00000519624 CDK12Q9NYV4 1490 aaPredicted RBP8.16□□□□□ -1.1
AC055854.1-202ENST00000519624 INO80Q9ULG1 1556 aaPredicted RBP8.16□□□□□ -1.1
AC055854.1-202ENST00000519624 EID1Q9Y6B2 187 aa8.16□□□□□ -1.1
AC055854.1-202ENST00000519624 SRCAPQ6ZRS2 3230 aa8.14□□□□□ -1.11
AC055854.1-202ENST00000519624 SCAF11Q99590 1463 aaKnown RBP8.14□□□□□ -1.11
AC055854.1-202ENST00000519624 RTEL1-TNFRSF6BF6WH68 1400 aa8.14□□□□□ -1.11
AC055854.1-202ENST00000519624 TXNDC2Q86VQ3 553 aa8.14□□□□□ -1.11
AC055854.1-202ENST00000519624 ADGBQ8N7X0 1667 aa8.14□□□□□ -1.11
AC055854.1-202ENST00000519624 FGD6Q6ZV73 1430 aa8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 MSH6P52701 1360 aa8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 TMEM94Q12767 1356 aa8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 UBTFP17480 764 aaKnown RBP8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 ROBO1Q9Y6N7 1651 aa8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 GPATCH8Q9UKJ3 1502 aaKnown RBP8.13□□□□□ -1.11
AC055854.1-202ENST00000519624 PROSER2Q86WR7 435 aaPredicted RBP8.12□□□□□ -1.11
AC055854.1-202ENST00000519624 SLAIN2Q9P270 581 aa8.12□□□□□ -1.11
AC055854.1-202ENST00000519624 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
AC055854.1-202ENST00000519624 CCNB3Q8WWL7 1395 aa8.11□□□□□ -1.11
AC055854.1-202ENST00000519624 KCNA6P17658 529 aa8.11□□□□□ -1.11
AC055854.1-202ENST00000519624 ARHGAP35Q9NRY4 1499 aa8.11□□□□□ -1.11
AC055854.1-202ENST00000519624 CDC42BPAQ5VT25 1732 aa8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 NUTM2BA6NNL0 878 aaPredicted RBP8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 NUTM2EB1AL46 878 aaPredicted RBP8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 NUTM2DQ5VT03 806 aaPredicted RBP8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 CHIC1Q5VXU3 224 aa8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 NUTM2AQ8IVF1 878 aaPredicted RBP8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
AC055854.1-202ENST00000519624 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
AC055854.1-202ENST00000519624 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
AC055854.1-202ENST00000519624 NGLY1Q96IV0 654 aa8.09□□□□□ -1.11
AC055854.1-202ENST00000519624 CASKIN1Q8WXD9 1431 aa8.09□□□□□ -1.11
AC055854.1-202ENST00000519624 ABCC3O15438 1527 aa8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 LTKP29376 864 aa8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 RBM6P78332 1123 aaKnown RBP8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 STAG3Q9UJ98 1225 aa8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 PHLPP1O60346 1717 aa8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 SLIT1O75093 1534 aa8.08□□□□□ -1.12
AC055854.1-202ENST00000519624 LRP6O75581 1613 aa8.07□□□□□ -1.12
AC055854.1-202ENST00000519624 NKTRP30414 1462 aaKnown RBP8.07□□□□□ -1.12
AC055854.1-202ENST00000519624 ARHGAP23Q9P227 1491 aa8.07□□□□□ -1.12
AC055854.1-202ENST00000519624 CCDC125Q86Z20 511 aa8.07□□□□□ -1.12
AC055854.1-202ENST00000519624 PRDM15P57071 1507 aaPredicted RBP8.07□□□□□ -1.12
AC055854.1-202ENST00000519624 ERVK-7P63135 1459 aa8.06□□□□□ -1.12
AC055854.1-202ENST00000519624 AFF2P51816 1311 aa8.06□□□□□ -1.12
AC055854.1-202ENST00000519624 RBM33Q96EV2 1170 aaKnown RBP8.06□□□□□ -1.12
AC055854.1-202ENST00000519624 MAP3K1Q13233 1512 aa8.06□□□□□ -1.12
AC055854.1-202ENST00000519624 TSPY4P0CV99 314 aa8.05□□□□□ -1.12
AC055854.1-202ENST00000519624 TSPY10P0CW01 314 aa8.05□□□□□ -1.12
AC055854.1-202ENST00000519624 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
AC055854.1-202ENST00000519624 TMEM2Q9UHN6 1383 aa8.05□□□□□ -1.12
AC055854.1-202ENST00000519624 MBD5Q9P267 1494 aa8.05□□□□□ -1.12
AC055854.1-202ENST00000519624 RGS12O14924 1447 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 COL16A1Q07092 1604 aaPredicted RBP8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 C14orf37Q86TY3 774 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 CADPS2Q86UW7 1296 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 BCANQ96GW7 911 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 MTUS2Q5JR59 1369 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 NCOA2Q15596 1464 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 FYCO1Q9BQS8 1478 aa8.04□□□□□ -1.12
AC055854.1-202ENST00000519624 NCOA3Q9Y6Q9 1424 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 XIRP1Q702N8 1843 aaKnown RBP8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 TIAM1Q13009 1591 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 ATF3P18847 181 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 SLC26A8Q96RN1 970 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 UBR1Q8IWV7 1749 aa8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 ZNF644Q9H582 1327 aaPredicted RBP8.03□□□□□ -1.12
AC055854.1-202ENST00000519624 C8orf37Q96NL8 207 aa8.02□□□□□ -1.13
AC055854.1-202ENST00000519624 LRRIQ1Q96JM4 1722 aa8.02□□□□□ -1.13
AC055854.1-202ENST00000519624 SHPRHQ149N8 1683 aa8.02□□□□□ -1.13
AC055854.1-202ENST00000519624 AHDC1Q5TGY3 1603 aaPredicted RBP8.01□□□□□ -1.13
AC055854.1-202ENST00000519624 EHMT2Q96KQ7 1210 aa8.01□□□□□ -1.13
AC055854.1-202ENST00000519624 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms