RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 MYO3AQ8NEV4 1616 aa19.6■□□□□ 0.73
CSMD1-205ENST00000519623 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
CSMD1-205ENST00000519623 MAST1Q9Y2H9 1570 aa19.58■□□□□ 0.73
CSMD1-205ENST00000519623 CEP170BQ9Y4F5 1589 aaPredicted RBP19.58■□□□□ 0.73
CSMD1-205ENST00000519623 PKD2Q13563 968 aa19.57■□□□□ 0.72
CSMD1-205ENST00000519623 LTBP4Q8N2S1 1624 aa19.57■□□□□ 0.72
CSMD1-205ENST00000519623 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
CSMD1-205ENST00000519623 FAM135AQ9P2D6 1515 aa19.56■□□□□ 0.72
CSMD1-205ENST00000519623 PLA2R1Q13018 1463 aa19.56■□□□□ 0.72
CSMD1-205ENST00000519623 APLP2Q06481 763 aa19.56■□□□□ 0.72
CSMD1-205ENST00000519623 A2ML1A8K2U0 1454 aa19.55■□□□□ 0.72
CSMD1-205ENST00000519623 PZPP20742 1482 aa19.55■□□□□ 0.72
CSMD1-205ENST00000519623 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
CSMD1-205ENST00000519623 TNRQ92752 1358 aa19.54■□□□□ 0.72
CSMD1-205ENST00000519623 DNMT1P26358 1616 aaKnown RBP19.53■□□□□ 0.72
CSMD1-205ENST00000519623 RNF17Q9BXT8 1623 aaKnown RBP19.51■□□□□ 0.71
CSMD1-205ENST00000519623 ABCC5O15440 1437 aa19.5■□□□□ 0.71
CSMD1-205ENST00000519623 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
CSMD1-205ENST00000519623 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
CSMD1-205ENST00000519623 EIF2AK4Q9P2K8 1649 aaKnown RBP19.47■□□□□ 0.71
CSMD1-205ENST00000519623 ABCC3O15438 1527 aa19.47■□□□□ 0.71
CSMD1-205ENST00000519623 DUOX2Q9NRD8 1548 aa19.46■□□□□ 0.71
CSMD1-205ENST00000519623 IQSEC2Q5JU85 1478 aa19.46■□□□□ 0.71
CSMD1-205ENST00000519623 FGD6Q6ZV73 1430 aa19.45■□□□□ 0.7
CSMD1-205ENST00000519623 MROH1Q8NDA8 1641 aa19.45■□□□□ 0.7
CSMD1-205ENST00000519623 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
CSMD1-205ENST00000519623 RRP7BPQ9NSQ0 103 aa19.45■□□□□ 0.7
CSMD1-205ENST00000519623 NLRP1Q9C000 1473 aa19.44■□□□□ 0.7
CSMD1-205ENST00000519623 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
CSMD1-205ENST00000519623 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
CSMD1-205ENST00000519623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
CSMD1-205ENST00000519623 ZC3H13Q5T200 1668 aaKnown RBP19.43■□□□□ 0.7
CSMD1-205ENST00000519623 DAPK1P53355 1430 aa19.42■□□□□ 0.7
CSMD1-205ENST00000519623 ANKLE2Q86XL3 938 aa19.42■□□□□ 0.7
CSMD1-205ENST00000519623 CROCC2H7BZ55 1655 aa19.42■□□□□ 0.7
CSMD1-205ENST00000519623 CFAP65Q6ZU64 1925 aaKnown RBP19.41■□□□□ 0.7
CSMD1-205ENST00000519623 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
CSMD1-205ENST00000519623 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
CSMD1-205ENST00000519623 UGGT1Q9NYU2 1555 aa19.4■□□□□ 0.7
CSMD1-205ENST00000519623 CHIC2Q9UKJ5 165 aa19.39■□□□□ 0.69
CSMD1-205ENST00000519623 ERBINQ96RT1 1412 aa19.39■□□□□ 0.69
CSMD1-205ENST00000519623 ERVK-7P63135 1459 aa19.39■□□□□ 0.69
CSMD1-205ENST00000519623 CEP152O94986 1710 aa19.39■□□□□ 0.69
CSMD1-205ENST00000519623 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.69
CSMD1-205ENST00000519623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
CSMD1-205ENST00000519623 MED14O60244 1454 aa19.35■□□□□ 0.69
CSMD1-205ENST00000519623 ARHGAP31Q2M1Z3 1444 aa19.35■□□□□ 0.69
CSMD1-205ENST00000519623 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
CSMD1-205ENST00000519623 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
CSMD1-205ENST00000519623 UBAP1LF5GYI3 381 aa19.33■□□□□ 0.68
CSMD1-205ENST00000519623 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
CSMD1-205ENST00000519623 DEPDC5O75140 1603 aa19.33■□□□□ 0.68
CSMD1-205ENST00000519623 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
CSMD1-205ENST00000519623 KANK1Q14678 1352 aa19.3■□□□□ 0.68
CSMD1-205ENST00000519623 VWDEQ8N2E2 1590 aa19.29■□□□□ 0.68
CSMD1-205ENST00000519623 ADGRL2O95490 1459 aa19.28■□□□□ 0.68
CSMD1-205ENST00000519623 UBR1Q8IWV7 1749 aa19.28■□□□□ 0.68
CSMD1-205ENST00000519623 CPS1P31327 1500 aa19.28■□□□□ 0.68
CSMD1-205ENST00000519623 LTKP29376 864 aa19.27■□□□□ 0.68
CSMD1-205ENST00000519623 LMTK2Q8IWU2 1503 aa19.26■□□□□ 0.67
CSMD1-205ENST00000519623 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
CSMD1-205ENST00000519623 ARHGAP23Q9P227 1491 aa19.24■□□□□ 0.67
CSMD1-205ENST00000519623 IDI1Q13907 227 aa19.24■□□□□ 0.67
CSMD1-205ENST00000519623 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
CSMD1-205ENST00000519623 SLIT1O75093 1534 aa19.23■□□□□ 0.67
CSMD1-205ENST00000519623 DISP3Q9P2K9 1392 aa19.22■□□□□ 0.67
CSMD1-205ENST00000519623 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
CSMD1-205ENST00000519623 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
CSMD1-205ENST00000519623 TOM1O60784 492 aa19.21■□□□□ 0.67
CSMD1-205ENST00000519623 STRCP1A6NGW2 1772 aa19.21■□□□□ 0.67
CSMD1-205ENST00000519623 PIK3C2BO00750 1634 aa19.21■□□□□ 0.67
CSMD1-205ENST00000519623 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CSMD1-205ENST00000519623 NOS1P29475 1434 aa19.19■□□□□ 0.66
CSMD1-205ENST00000519623 EID1Q9Y6B2 187 aa19.19■□□□□ 0.66
CSMD1-205ENST00000519623 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
CSMD1-205ENST00000519623 EFCAB6Q5THR3 1501 aa19.18■□□□□ 0.66
CSMD1-205ENST00000519623 PIP4K2BP78356 416 aa19.17■□□□□ 0.66
CSMD1-205ENST00000519623 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
CSMD1-205ENST00000519623 SYNMO15061 1565 aa19.17■□□□□ 0.66
CSMD1-205ENST00000519623 LRRC7Q96NW7 1537 aa19.16■□□□□ 0.66
CSMD1-205ENST00000519623 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
CSMD1-205ENST00000519623 KDM5AP29375 1690 aaKnown RBP19.16■□□□□ 0.66
CSMD1-205ENST00000519623 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
CSMD1-205ENST00000519623 ALKQ9UM73 1620 aa19.14■□□□□ 0.66
CSMD1-205ENST00000519623 HSPA1LP34931 641 aa19.14■□□□□ 0.65
CSMD1-205ENST00000519623 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
CSMD1-205ENST00000519623 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
CSMD1-205ENST00000519623 RPRD2Q5VT52 1461 aaKnown RBP19.12■□□□□ 0.65
CSMD1-205ENST00000519623 TET3O43151 1660 aa19.1■□□□□ 0.65
CSMD1-205ENST00000519623 UNC13BO14795 1591 aa19.08■□□□□ 0.65
CSMD1-205ENST00000519623 ITGAEP38570 1179 aa19.08■□□□□ 0.64
CSMD1-205ENST00000519623 ADGRB3O60242 1522 aa19.08■□□□□ 0.64
CSMD1-205ENST00000519623 SLC26A8Q96RN1 970 aa19.07■□□□□ 0.64
CSMD1-205ENST00000519623 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
CSMD1-205ENST00000519623 XIRP1Q702N8 1843 aaKnown RBP19.05■□□□□ 0.64
CSMD1-205ENST00000519623 KCNA6P17658 529 aa19.05■□□□□ 0.64
CSMD1-205ENST00000519623 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
CSMD1-205ENST00000519623 MYO5BQ9ULV0 1848 aa19.03■□□□□ 0.64
CSMD1-205ENST00000519623 E9PCH4 1651 aa19.03■□□□□ 0.64
CSMD1-205ENST00000519623 NUP155O75694 1391 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms