RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 MED14O60244 1454 aa13.89□□□□□ -0.19
CTNNA1-215ENST00000519309 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
CTNNA1-215ENST00000519309 HSPA1LP34931 641 aa13.89□□□□□ -0.19
CTNNA1-215ENST00000519309 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
CTNNA1-215ENST00000519309 EHBP1L1Q8N3D4 1523 aa13.87□□□□□ -0.19
CTNNA1-215ENST00000519309 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.197e-14■■■■■ 45.2
CTNNA1-215ENST00000519309 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
CTNNA1-215ENST00000519309 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
CTNNA1-215ENST00000519309 TNRQ92752 1358 aa13.86□□□□□ -0.19
CTNNA1-215ENST00000519309 ZNF777Q9ULD5 760 aaPredicted RBP13.86□□□□□ -0.19
CTNNA1-215ENST00000519309 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
CTNNA1-215ENST00000519309 CCNB3Q8WWL7 1395 aa13.85□□□□□ -0.19
CTNNA1-215ENST00000519309 TOM1O60784 492 aa13.85□□□□□ -0.19
CTNNA1-215ENST00000519309 UGGT1Q9NYU2 1555 aa13.84□□□□□ -0.19
CTNNA1-215ENST00000519309 GGT6Q6P531 493 aa13.84□□□□□ -0.19
CTNNA1-215ENST00000519309 DHX29Q7Z478 1369 aaKnown RBP13.83□□□□□ -0.19
CTNNA1-215ENST00000519309 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
CTNNA1-215ENST00000519309 CFDP1Q9UEE9 299 aaPredicted RBP13.83□□□□□ -0.2
CTNNA1-215ENST00000519309 NPHP4O75161 1426 aaPredicted RBP13.82□□□□□ -0.2
CTNNA1-215ENST00000519309 CCDC141Q6ZP82 1450 aa13.82□□□□□ -0.2
CTNNA1-215ENST00000519309 SCAF1Q9H7N4 1312 aaKnown RBP13.81□□□□□ -0.2
CTNNA1-215ENST00000519309 CEP162Q5TB80 1403 aa13.81□□□□□ -0.2
CTNNA1-215ENST00000519309 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
CTNNA1-215ENST00000519309 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
CTNNA1-215ENST00000519309 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
CTNNA1-215ENST00000519309 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
CTNNA1-215ENST00000519309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTNNA1-215ENST00000519309 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
CTNNA1-215ENST00000519309 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
CTNNA1-215ENST00000519309 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
CTNNA1-215ENST00000519309 CAMSAP2Q08AD1 1489 aa13.78□□□□□ -0.2
CTNNA1-215ENST00000519309 UBR1Q8IWV7 1749 aa13.78□□□□□ -0.2
CTNNA1-215ENST00000519309 ABCC3O15438 1527 aa13.77□□□□□ -0.21
CTNNA1-215ENST00000519309 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
CTNNA1-215ENST00000519309 ANKLE2Q86XL3 938 aa13.76□□□□□ -0.21
CTNNA1-215ENST00000519309 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
CTNNA1-215ENST00000519309 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
CTNNA1-215ENST00000519309 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-215ENST00000519309 FBXO31Q5XUX0 539 aaPredicted RBP13.75□□□□□ -0.21
CTNNA1-215ENST00000519309 ERVK-7P63135 1459 aa13.74□□□□□ -0.21
CTNNA1-215ENST00000519309 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
CTNNA1-215ENST00000519309 CEP152O94986 1710 aa13.73□□□□□ -0.21
CTNNA1-215ENST00000519309 KIF3BO15066 747 aa13.72□□□□□ -0.21
CTNNA1-215ENST00000519309 SLIT1O75093 1534 aa13.72□□□□□ -0.21
CTNNA1-215ENST00000519309 ARHGAP23Q9P227 1491 aa13.72□□□□□ -0.21
CTNNA1-215ENST00000519309 NCOA2Q15596 1464 aa13.71□□□□□ -0.21
CTNNA1-215ENST00000519309 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.21
CTNNA1-215ENST00000519309 WASHC2CQ9Y4E1 1318 aa13.7□□□□□ -0.22
CTNNA1-215ENST00000519309 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
CTNNA1-215ENST00000519309 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
CTNNA1-215ENST00000519309 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-215ENST00000519309 RGS17Q9UGC6 210 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-215ENST00000519309 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
CTNNA1-215ENST00000519309 FAM135BQ49AJ0 1406 aa13.64□□□□□ -0.23
CTNNA1-215ENST00000519309 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
CTNNA1-215ENST00000519309 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
CTNNA1-215ENST00000519309 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
CTNNA1-215ENST00000519309 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
CTNNA1-215ENST00000519309 SETD1AO15047 1707 aaKnown RBP13.63□□□□□ -0.23
CTNNA1-215ENST00000519309 CROCC2H7BZ55 1655 aa13.63□□□□□ -0.23
CTNNA1-215ENST00000519309 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-215ENST00000519309 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
CTNNA1-215ENST00000519309 DUOX2Q9NRD8 1548 aa13.61□□□□□ -0.23
CTNNA1-215ENST00000519309 NKTRP30414 1462 aaKnown RBP13.6□□□□□ -0.23
CTNNA1-215ENST00000519309 TET3O43151 1660 aa13.57□□□□□ -0.24
CTNNA1-215ENST00000519309 EFCAB6Q5THR3 1501 aa13.57□□□□□ -0.24
CTNNA1-215ENST00000519309 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 LTKP29376 864 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 TMEM2Q9UHN6 1383 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 PHLPP1O60346 1717 aa13.56□□□□□ -0.24
CTNNA1-215ENST00000519309 LMTK2Q8IWU2 1503 aa13.55□□□□□ -0.24
CTNNA1-215ENST00000519309 POTEAQ6S8J7 498 aa13.55□□□□□ -0.24
CTNNA1-215ENST00000519309 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
CTNNA1-215ENST00000519309 TMEM94Q12767 1356 aa13.55□□□□□ -0.24
CTNNA1-215ENST00000519309 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
CTNNA1-215ENST00000519309 COL16A1Q07092 1604 aaPredicted RBP13.54□□□□□ -0.24
CTNNA1-215ENST00000519309 TXNDC2Q86VQ3 553 aa13.52□□□□□ -0.25
CTNNA1-215ENST00000519309 MYOM3Q5VTT5 1437 aa13.52□□□□□ -0.25
CTNNA1-215ENST00000519309 KIF15Q9NS87 1388 aa13.5□□□□□ -0.25
CTNNA1-215ENST00000519309 EID1Q9Y6B2 187 aa13.5□□□□□ -0.25
CTNNA1-215ENST00000519309 CHD2O14647 1828 aaKnown RBP13.5□□□□□ -0.25
CTNNA1-215ENST00000519309 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
CTNNA1-215ENST00000519309 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
CTNNA1-215ENST00000519309 JCADQ9P266 1359 aa13.48□□□□□ -0.25
CTNNA1-215ENST00000519309 KCNA6P17658 529 aa13.48□□□□□ -0.25
CTNNA1-215ENST00000519309 AHDC1Q5TGY3 1603 aaPredicted RBP13.48□□□□□ -0.25
CTNNA1-215ENST00000519309 NOS1P29475 1434 aa13.47□□□□□ -0.25
CTNNA1-215ENST00000519309 FGD6Q6ZV73 1430 aa13.47□□□□□ -0.25
CTNNA1-215ENST00000519309 LRP6O75581 1613 aa13.47□□□□□ -0.25
CTNNA1-215ENST00000519309 MYO5BQ9ULV0 1848 aa13.46□□□□□ -0.25
CTNNA1-215ENST00000519309 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
CTNNA1-215ENST00000519309 MSH6P52701 1360 aa13.45□□□□□ -0.26
CTNNA1-215ENST00000519309 GCC2Q8IWJ2 1684 aa13.45□□□□□ -0.26
CTNNA1-215ENST00000519309 ZFYVE9O95405 1425 aa13.45□□□□□ -0.26
CTNNA1-215ENST00000519309 ABCC5O15440 1437 aa13.44□□□□□ -0.26
CTNNA1-215ENST00000519309 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
CTNNA1-215ENST00000519309 KANK1Q14678 1352 aa13.44□□□□□ -0.26
CTNNA1-215ENST00000519309 RPRD2Q5VT52 1461 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 174.3 ms