RNA–Protein interactions for RNA: ENST00000519221.5

MCPH1-202, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-202ENST00000519221 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
MCPH1-202ENST00000519221 ABCC5O15440 1437 aa19.78■□□□□ 0.76
MCPH1-202ENST00000519221 PTPRKQ15262 1439 aa19.78■□□□□ 0.76
MCPH1-202ENST00000519221 DUOX2Q9NRD8 1548 aa19.78■□□□□ 0.76
MCPH1-202ENST00000519221 STRCQ7RTU9 1775 aa19.78■□□□□ 0.76
MCPH1-202ENST00000519221 DAPK1P53355 1430 aa19.76■□□□□ 0.75
MCPH1-202ENST00000519221 ZNF142P52746 1687 aaPredicted RBP19.76■□□□□ 0.75
MCPH1-202ENST00000519221 ZC3H13Q5T200 1668 aaKnown RBP19.75■□□□□ 0.75
MCPH1-202ENST00000519221 MYO3AQ8NEV4 1616 aa19.74■□□□□ 0.75
MCPH1-202ENST00000519221 DMRT2Q9Y5R5 561 aa19.74■□□□□ 0.75
MCPH1-202ENST00000519221 WASHC2CQ9Y4E1 1318 aa19.74■□□□□ 0.75
MCPH1-202ENST00000519221 PZPP20742 1482 aa19.73■□□□□ 0.75
MCPH1-202ENST00000519221 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
MCPH1-202ENST00000519221 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
MCPH1-202ENST00000519221 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
MCPH1-202ENST00000519221 ANKRD30AQ9BXX3 1397 aa19.7■□□□□ 0.74
MCPH1-202ENST00000519221 MROH1Q8NDA8 1641 aa19.69■□□□□ 0.74
MCPH1-202ENST00000519221 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
MCPH1-202ENST00000519221 ABCC3O15438 1527 aa19.68■□□□□ 0.74
MCPH1-202ENST00000519221 CAMSAP1Q5T5Y3 1602 aa19.68■□□□□ 0.74
MCPH1-202ENST00000519221 PTPRTO14522 1441 aa19.68■□□□□ 0.74
MCPH1-202ENST00000519221 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
MCPH1-202ENST00000519221 RRP7BPQ9NSQ0 103 aa19.66■□□□□ 0.74
MCPH1-202ENST00000519221 TNRQ92752 1358 aa19.66■□□□□ 0.74
MCPH1-202ENST00000519221 ADGRL2O95490 1459 aa19.66■□□□□ 0.74
MCPH1-202ENST00000519221 PLA2R1Q13018 1463 aa19.66■□□□□ 0.74
MCPH1-202ENST00000519221 PRDM15P57071 1507 aaPredicted RBP19.66■□□□□ 0.74
MCPH1-202ENST00000519221 DEPDC5O75140 1603 aa19.65■□□□□ 0.74
MCPH1-202ENST00000519221 CEP152O94986 1710 aa19.65■□□□□ 0.74
MCPH1-202ENST00000519221 FAM50AQ14320 339 aaKnown RBP19.64■□□□□ 0.73
MCPH1-202ENST00000519221 CFAP65Q6ZU64 1925 aaKnown RBP19.63■□□□□ 0.73
MCPH1-202ENST00000519221 FBXO31Q5XUX0 539 aaPredicted RBP19.63■□□□□ 0.73
MCPH1-202ENST00000519221 CHIC2Q9UKJ5 165 aa19.62■□□□□ 0.73
MCPH1-202ENST00000519221 NLRP1Q9C000 1473 aa19.61■□□□□ 0.73
MCPH1-202ENST00000519221 SPATA31D1Q6ZQQ2 1576 aa19.61■□□□□ 0.73
MCPH1-202ENST00000519221 PKD2Q13563 968 aa19.6■□□□□ 0.73
MCPH1-202ENST00000519221 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
MCPH1-202ENST00000519221 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
MCPH1-202ENST00000519221 KANK1Q14678 1352 aa19.58■□□□□ 0.73
MCPH1-202ENST00000519221 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
MCPH1-202ENST00000519221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
MCPH1-202ENST00000519221 CERKQ8TCT0 537 aa19.56■□□□□ 0.72
MCPH1-202ENST00000519221 VWDEQ8N2E2 1590 aa19.56■□□□□ 0.72
MCPH1-202ENST00000519221 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
MCPH1-202ENST00000519221 LMTK2Q8IWU2 1503 aa19.56■□□□□ 0.72
MCPH1-202ENST00000519221 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
MCPH1-202ENST00000519221 ROCK1Q13464 1354 aa19.54■□□□□ 0.72
MCPH1-202ENST00000519221 NCKAP5LQ9HCH0 1330 aa19.53■□□□□ 0.72
MCPH1-202ENST00000519221 UGGT1Q9NYU2 1555 aa19.53■□□□□ 0.72
MCPH1-202ENST00000519221 THEMISQ8N1K5 641 aaPredicted RBP19.53■□□□□ 0.72
MCPH1-202ENST00000519221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.72
MCPH1-202ENST00000519221 LTBP4Q8N2S1 1624 aa19.49■□□□□ 0.71
MCPH1-202ENST00000519221 PPARGC1BQ86YN6 1023 aaKnown RBP19.48■□□□□ 0.71
MCPH1-202ENST00000519221 UBR1Q8IWV7 1749 aa19.48■□□□□ 0.71
MCPH1-202ENST00000519221 EFCAB6Q5THR3 1501 aa19.47■□□□□ 0.71
MCPH1-202ENST00000519221 ANKLE2Q86XL3 938 aa19.47■□□□□ 0.71
MCPH1-202ENST00000519221 NEURL4Q96JN8 1562 aa19.47■□□□□ 0.71
MCPH1-202ENST00000519221 UNC13BO14795 1591 aa19.46■□□□□ 0.71
MCPH1-202ENST00000519221 RRBP1Q9P2E9 1410 aaKnown RBP19.45■□□□□ 0.7
MCPH1-202ENST00000519221 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
MCPH1-202ENST00000519221 TET3O43151 1660 aa19.45■□□□□ 0.7
MCPH1-202ENST00000519221 KDM5AP29375 1690 aaKnown RBP19.44■□□□□ 0.7
MCPH1-202ENST00000519221 MED14O60244 1454 aa19.44■□□□□ 0.7
MCPH1-202ENST00000519221 RPRD2Q5VT52 1461 aaKnown RBP19.44■□□□□ 0.7
MCPH1-202ENST00000519221 GCC2Q8IWJ2 1684 aa19.43■□□□□ 0.7
MCPH1-202ENST00000519221 NOS1P29475 1434 aa19.42■□□□□ 0.7
MCPH1-202ENST00000519221 PIK3C2BO00750 1634 aa19.4■□□□□ 0.7
MCPH1-202ENST00000519221 IQGAP1P46940 1657 aa19.4■□□□□ 0.7
MCPH1-202ENST00000519221 ZNF335Q9H4Z2 1342 aaPredicted RBP19.4■□□□□ 0.7
MCPH1-202ENST00000519221 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
MCPH1-202ENST00000519221 SYNMO15061 1565 aa19.4■□□□□ 0.7
MCPH1-202ENST00000519221 ITGAEP38570 1179 aa19.39■□□□□ 0.69
MCPH1-202ENST00000519221 ARHGAP23Q9P227 1491 aa19.39■□□□□ 0.69
MCPH1-202ENST00000519221 SLIT1O75093 1534 aa19.39■□□□□ 0.69
MCPH1-202ENST00000519221 IQGAP3Q86VI3 1631 aa19.39■□□□□ 0.69
MCPH1-202ENST00000519221 SLC52A1Q9NWF4 448 aa19.36■□□□□ 0.69
MCPH1-202ENST00000519221 SCAF11Q99590 1463 aaKnown RBP19.35■□□□□ 0.69
MCPH1-202ENST00000519221 CPS1P31327 1500 aa19.35■□□□□ 0.69
MCPH1-202ENST00000519221 IDI1Q13907 227 aa19.34■□□□□ 0.69
MCPH1-202ENST00000519221 STAG3Q9UJ98 1225 aa19.34■□□□□ 0.69
MCPH1-202ENST00000519221 E9PCH4 1651 aa19.33■□□□□ 0.69
MCPH1-202ENST00000519221 ADGRB3O60242 1522 aa19.32■□□□□ 0.68
MCPH1-202ENST00000519221 EID1Q9Y6B2 187 aa19.32■□□□□ 0.68
MCPH1-202ENST00000519221 NUP155O75694 1391 aa19.32■□□□□ 0.68
MCPH1-202ENST00000519221 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
MCPH1-202ENST00000519221 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
MCPH1-202ENST00000519221 LTKP29376 864 aa19.29■□□□□ 0.68
MCPH1-202ENST00000519221 MYO5BQ9ULV0 1848 aa19.29■□□□□ 0.68
MCPH1-202ENST00000519221 NAIPQ13075 1403 aa19.27■□□□□ 0.68
MCPH1-202ENST00000519221 TMEM131LA2VDJ0 1609 aa19.25■□□□□ 0.67
MCPH1-202ENST00000519221 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
MCPH1-202ENST00000519221 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
MCPH1-202ENST00000519221 SPHKAPQ2M3C7 1700 aa19.22■□□□□ 0.67
MCPH1-202ENST00000519221 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
MCPH1-202ENST00000519221 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
MCPH1-202ENST00000519221 ZFYVE9O95405 1425 aa19.19■□□□□ 0.66
MCPH1-202ENST00000519221 LRRC7Q96NW7 1537 aa19.18■□□□□ 0.66
MCPH1-202ENST00000519221 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
MCPH1-202ENST00000519221 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
MCPH1-202ENST00000519221 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms