RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 MAGI2Q86UL8 1455 aa17.98■□□□□ 0.47
SPIDR-209ENST00000519141 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
SPIDR-209ENST00000519141 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
SPIDR-209ENST00000519141 TIMELESSQ9UNS1 1208 aa17.96■□□□□ 0.47
SPIDR-209ENST00000519141 DEPDC5O75140 1603 aa17.95■□□□□ 0.46
SPIDR-209ENST00000519141 ABCA6Q8N139 1617 aa17.95■□□□□ 0.46
SPIDR-209ENST00000519141 ANKRD30BQ9BXX2 1392 aa17.94■□□□□ 0.46
SPIDR-209ENST00000519141 DHX29Q7Z478 1369 aaKnown RBP17.94■□□□□ 0.46
SPIDR-209ENST00000519141 FOXD1Q16676 465 aa17.93■□□□□ 0.46
SPIDR-209ENST00000519141 TONSLQ96HA7 1378 aa17.93■□□□□ 0.46
SPIDR-209ENST00000519141 PKD2Q13563 968 aa17.93■□□□□ 0.46
SPIDR-209ENST00000519141 ZMYM4Q5VZL5 1548 aa17.92■□□□□ 0.46
SPIDR-209ENST00000519141 A2MP01023 1474 aa17.92■□□□□ 0.46
SPIDR-209ENST00000519141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.9■□□□□ 0.461e-6■■■■□ 21
SPIDR-209ENST00000519141 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
SPIDR-209ENST00000519141 RPRD2Q5VT52 1461 aaKnown RBP17.88■□□□□ 0.45
SPIDR-209ENST00000519141 PRDM15P57071 1507 aaPredicted RBP17.88■□□□□ 0.45
SPIDR-209ENST00000519141 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
SPIDR-209ENST00000519141 ARHGEF40Q8TER5 1519 aa17.88■□□□□ 0.45
SPIDR-209ENST00000519141 RNF17Q9BXT8 1623 aaKnown RBP17.88■□□□□ 0.45
SPIDR-209ENST00000519141 KANK1Q14678 1352 aa17.86■□□□□ 0.45
SPIDR-209ENST00000519141 YEATS2Q9ULM3 1422 aa17.86■□□□□ 0.45
SPIDR-209ENST00000519141 MROH1Q8NDA8 1641 aa17.86■□□□□ 0.45
SPIDR-209ENST00000519141 KIF3BO15066 747 aa17.86■□□□□ 0.45
SPIDR-209ENST00000519141 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
SPIDR-209ENST00000519141 TET3O43151 1660 aa17.85■□□□□ 0.45
SPIDR-209ENST00000519141 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
SPIDR-209ENST00000519141 ADAMTSL3P82987 1691 aa17.82■□□□□ 0.44
SPIDR-209ENST00000519141 E9PCH4 1651 aa17.81■□□□□ 0.44
SPIDR-209ENST00000519141 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-209ENST00000519141 CEP152O94986 1710 aa17.79■□□□□ 0.44
SPIDR-209ENST00000519141 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
SPIDR-209ENST00000519141 REREQ9P2R6 1566 aa17.78■□□□□ 0.44
SPIDR-209ENST00000519141 LMTK2Q8IWU2 1503 aa17.77■□□□□ 0.43
SPIDR-209ENST00000519141 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.43
SPIDR-209ENST00000519141 ATP10AO60312 1499 aa17.77■□□□□ 0.43
SPIDR-209ENST00000519141 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
SPIDR-209ENST00000519141 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
SPIDR-209ENST00000519141 PTPRMP28827 1452 aa17.76■□□□□ 0.43
SPIDR-209ENST00000519141 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
SPIDR-209ENST00000519141 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
SPIDR-209ENST00000519141 PLA2R1Q13018 1463 aa17.75■□□□□ 0.43
SPIDR-209ENST00000519141 L3MBTL2Q969R5 705 aa17.74■□□□□ 0.43
SPIDR-209ENST00000519141 TRPM2O94759 1503 aa17.73■□□□□ 0.43
SPIDR-209ENST00000519141 ZC3H13Q5T200 1668 aaKnown RBP17.73■□□□□ 0.43
SPIDR-209ENST00000519141 GGT6Q6P531 493 aa17.72■□□□□ 0.43
SPIDR-209ENST00000519141 ABCC3O15438 1527 aa17.72■□□□□ 0.43
SPIDR-209ENST00000519141 AGLP35573 1532 aa17.71■□□□□ 0.43
SPIDR-209ENST00000519141 MLECQ14165 292 aa17.71■□□□□ 0.42
SPIDR-209ENST00000519141 CAMSAP1Q5T5Y3 1602 aa17.7■□□□□ 0.42
SPIDR-209ENST00000519141 PTPRTO14522 1441 aa17.69■□□□□ 0.42
SPIDR-209ENST00000519141 RIMS1Q86UR5 1692 aaKnown RBP17.68■□□□□ 0.42
SPIDR-209ENST00000519141 WASHC2CQ9Y4E1 1318 aa17.67■□□□□ 0.42
SPIDR-209ENST00000519141 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
SPIDR-209ENST00000519141 NPATQ14207 1427 aa17.64■□□□□ 0.41
SPIDR-209ENST00000519141 FER1L4A9Z1Z3 1794 aa17.63■□□□□ 0.41
SPIDR-209ENST00000519141 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
SPIDR-209ENST00000519141 KIF1BO60333 1816 aa17.61■□□□□ 0.41
SPIDR-209ENST00000519141 ARHGAP31Q2M1Z3 1444 aa17.61■□□□□ 0.41
SPIDR-209ENST00000519141 UHRF1BP1Q6BDS2 1440 aa17.61■□□□□ 0.41
SPIDR-209ENST00000519141 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
SPIDR-209ENST00000519141 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
SPIDR-209ENST00000519141 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
SPIDR-209ENST00000519141 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
SPIDR-209ENST00000519141 CNTLNQ9NXG0 1405 aa17.6■□□□□ 0.41
SPIDR-209ENST00000519141 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
SPIDR-209ENST00000519141 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.41
SPIDR-209ENST00000519141 DCAF11Q8TEB1 546 aa17.58■□□□□ 0.4
SPIDR-209ENST00000519141 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
SPIDR-209ENST00000519141 RGL3Q3MIN7 710 aa17.57■□□□□ 0.4
SPIDR-209ENST00000519141 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
SPIDR-209ENST00000519141 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
SPIDR-209ENST00000519141 PREX1Q8TCU6 1659 aa17.56■□□□□ 0.4
SPIDR-209ENST00000519141 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
SPIDR-209ENST00000519141 CEBPAP49715 358 aaPredicted RBP17.55■□□□□ 0.4
SPIDR-209ENST00000519141 NOS1P29475 1434 aa17.55■□□□□ 0.4
SPIDR-209ENST00000519141 DIEXFQ68CQ4 756 aaKnown RBP17.55■□□□□ 0.4
SPIDR-209ENST00000519141 KDM2AQ9Y2K7 1162 aa17.55■□□□□ 0.4
SPIDR-209ENST00000519141 SYNMO15061 1565 aa17.54■□□□□ 0.4
SPIDR-209ENST00000519141 MROH2AA6NES4 1674 aa17.54■□□□□ 0.4
SPIDR-209ENST00000519141 PIK3C2BO00750 1634 aa17.54■□□□□ 0.4
SPIDR-209ENST00000519141 PRAG1Q86YV5 1406 aa17.53■□□□□ 0.4
SPIDR-209ENST00000519141 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
SPIDR-209ENST00000519141 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
SPIDR-209ENST00000519141 SETD1BQ9UPS6 1966 aaKnown RBP17.51■□□□□ 0.39
SPIDR-209ENST00000519141 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.396e-6■■■■□ 25.1
SPIDR-209ENST00000519141 ESF1Q9H501 851 aaKnown RBP17.5■□□□□ 0.39
SPIDR-209ENST00000519141 IFT172Q9UG01 1749 aa17.5■□□□□ 0.39
SPIDR-209ENST00000519141 ERVK-7P63135 1459 aa17.49■□□□□ 0.39
SPIDR-209ENST00000519141 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
SPIDR-209ENST00000519141 HSPA2P54652 639 aa17.48■□□□□ 0.39
SPIDR-209ENST00000519141 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
SPIDR-209ENST00000519141 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SPIDR-209ENST00000519141 C3P01024 1663 aa17.47■□□□□ 0.39
SPIDR-209ENST00000519141 MYOM2P54296 1465 aa17.46■□□□□ 0.39
SPIDR-209ENST00000519141 LAMC1P11047 1609 aa17.46■□□□□ 0.39
SPIDR-209ENST00000519141 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
SPIDR-209ENST00000519141 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
SPIDR-209ENST00000519141 PPLO60437 1756 aa17.45■□□□□ 0.38
SPIDR-209ENST00000519141 USP47Q96K76 1375 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms