RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
CLK4-202ENST00000519132 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
CLK4-202ENST00000519132 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
CLK4-202ENST00000519132 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
CLK4-202ENST00000519132 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
CLK4-202ENST00000519132 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
CLK4-202ENST00000519132 WIZO95785 1651 aa11.38□□□□□ -0.59
CLK4-202ENST00000519132 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
CLK4-202ENST00000519132 POM121CA8CG34 1229 aa11.37□□□□□ -0.59
CLK4-202ENST00000519132 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
CLK4-202ENST00000519132 HIC1Q14526 733 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
CLK4-202ENST00000519132 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 GDPD2Q9HCC8 539 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
CLK4-202ENST00000519132 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
CLK4-202ENST00000519132 PTGDRQ13258 359 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CLK4-202ENST00000519132 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
CLK4-202ENST00000519132 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 ATAD2BQ9ULI0 1458 aa11.31□□□□□ -0.6
CLK4-202ENST00000519132 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
CLK4-202ENST00000519132 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
CLK4-202ENST00000519132 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 FCHSD2O94868 740 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 RFX1P22670 979 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CLK4-202ENST00000519132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 SSTR3P32745 418 aaPredicted RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 FOXK1P85037 733 aa11.28□□□□□ -0.6
CLK4-202ENST00000519132 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
CLK4-202ENST00000519132 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLK4-202ENST00000519132 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
CLK4-202ENST00000519132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■■■■□ 26.7
CLK4-202ENST00000519132 NCAPD3P42695 1498 aa11.26□□□□□ -0.61
CLK4-202ENST00000519132 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
CLK4-202ENST00000519132 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
CLK4-202ENST00000519132 GLMNQ92990 594 aa11.23□□□□□ -0.61
CLK4-202ENST00000519132 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
CLK4-202ENST00000519132 ABL2P42684 1182 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
CLK4-202ENST00000519132 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 RFC5P40937 340 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
CLK4-202ENST00000519132 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
CLK4-202ENST00000519132 TBC1D12O60347 775 aa11.19□□□□□ -0.62
CLK4-202ENST00000519132 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
CLK4-202ENST00000519132 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
CLK4-202ENST00000519132 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
CLK4-202ENST00000519132 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
CLK4-202ENST00000519132 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
CLK4-202ENST00000519132 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
CLK4-202ENST00000519132 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
CLK4-202ENST00000519132 CLCN1P35523 988 aa11.15□□□□□ -0.63
CLK4-202ENST00000519132 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
CLK4-202ENST00000519132 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 KIF3CO14782 793 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 QPCTQ16769 361 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 E9PSI1 815 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
CLK4-202ENST00000519132 IVNS1ABPQ9Y6Y0 642 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
CLK4-202ENST00000519132 EVI5O60447 810 aa11.09□□□□□ -0.63
CLK4-202ENST00000519132 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
CLK4-202ENST00000519132 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
CLK4-202ENST00000519132 MAP3K7O43318 606 aa11.08□□□□□ -0.64
CLK4-202ENST00000519132 CFAP70Q5T0N1 1121 aa11.07□□□□□ -0.64
CLK4-202ENST00000519132 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
CLK4-202ENST00000519132 PTGER2P43116 358 aa11.06□□□□□ -0.64
CLK4-202ENST00000519132 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
CLK4-202ENST00000519132 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
CLK4-202ENST00000519132 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
CLK4-202ENST00000519132 GPR37L1O60883 481 aa11.03□□□□□ -0.64
CLK4-202ENST00000519132 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
CLK4-202ENST00000519132 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
CLK4-202ENST00000519132 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
CLK4-202ENST00000519132 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
CLK4-202ENST00000519132 HMX1Q9NP08 348 aaPredicted RBP11.02□□□□□ -0.65
CLK4-202ENST00000519132 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
CLK4-202ENST00000519132 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms