RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 ARID3AQ99856 593 aa8.23□□□□□ -1.09
CTNNA1-212ENST00000518919 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
CTNNA1-212ENST00000518919 RBM33Q96EV2 1170 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-212ENST00000518919 DCBLD2Q96PD2 775 aa8.22□□□□□ -1.09
CTNNA1-212ENST00000518919 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-212ENST00000518919 SLC34A2O95436 690 aa8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 MDM2Q00987 491 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 SH3D19Q5HYK7 790 aa8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 ANO8Q9HCE9 1232 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 GPCPD1Q9NPB8 672 aa8.21□□□□□ -1.1
CTNNA1-212ENST00000518919 ONECUT3O60422 494 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-212ENST00000518919 C1orf115Q9H7X2 142 aa8.2□□□□□ -1.1
CTNNA1-212ENST00000518919 NPDC1Q9NQX5 325 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-212ENST00000518919 GABBR2O75899 941 aa8.19□□□□□ -1.1
CTNNA1-212ENST00000518919 TYW1BQ6NUM6 668 aa8.19□□□□□ -1.1
CTNNA1-212ENST00000518919 ARID3CA6NKF2 412 aa8.18□□□□□ -1.1
CTNNA1-212ENST00000518919 TSR1Q2NL82 804 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-212ENST00000518919 SLAIN1Q8ND83 568 aa8.18□□□□□ -1.1
CTNNA1-212ENST00000518919 TMUB1Q9BVT8 246 aa8.18□□□□□ -1.1
CTNNA1-212ENST00000518919 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
CTNNA1-212ENST00000518919 POTEFA5A3E0 1075 aa8.17□□□□□ -1.1
CTNNA1-212ENST00000518919 APBB1O00213 710 aa8.17□□□□□ -1.1
CTNNA1-212ENST00000518919 C7P10643 843 aa8.17□□□□□ -1.1
CTNNA1-212ENST00000518919 METRNQ9UJH8 293 aa8.17□□□□□ -1.1
CTNNA1-212ENST00000518919 SSTR3P32745 418 aaPredicted RBP8.16□□□□□ -1.1
CTNNA1-212ENST00000518919 MCM6Q14566 821 aa8.16□□□□□ -1.1
CTNNA1-212ENST00000518919 FBXW7Q969H0 707 aa8.16□□□□□ -1.1
CTNNA1-212ENST00000518919 JPH4Q96JJ6 628 aa8.16□□□□□ -1.1
CTNNA1-212ENST00000518919 PHOX2BQ99453 314 aa8.16□□□□□ -1.1
CTNNA1-212ENST00000518919 A6NJR5 290 aa8.15□□□□□ -1.1
CTNNA1-212ENST00000518919 BEGAINQ9BUH8 593 aa8.15□□□□□ -1.1
CTNNA1-212ENST00000518919 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-212ENST00000518919 PCDHGA4Q9Y5G9 962 aa8.15□□□□□ -1.1
CTNNA1-212ENST00000518919 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
CTNNA1-212ENST00000518919 CLUAP1Q96AJ1 413 aa8.14□□□□□ -1.11
CTNNA1-212ENST00000518919 PODXL2Q9NZ53 605 aa8.14□□□□□ -1.11
CTNNA1-212ENST00000518919 OATP04181 439 aa8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 PADI6Q6TGC4 694 aa8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 METTL3Q86U44 580 aaKnown RBP8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 RB1CC1Q8TDY2 1594 aa8.13□□□□□ -1.11
CTNNA1-212ENST00000518919 POTEHQ6S545 545 aa8.12□□□□□ -1.11
CTNNA1-212ENST00000518919 CERKQ8TCT0 537 aa8.12□□□□□ -1.11
CTNNA1-212ENST00000518919 NLRP7Q8WX94 980 aa8.12□□□□□ -1.11
CTNNA1-212ENST00000518919 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-212ENST00000518919 TRAK2O60296 914 aa8.11□□□□□ -1.11
CTNNA1-212ENST00000518919 FOSBP53539 338 aa8.1□□□□□ -1.11
CTNNA1-212ENST00000518919 ADGRG1Q9Y653 693 aa8.1□□□□□ -1.11
CTNNA1-212ENST00000518919 CCDC82Q8N4S0 544 aa8.09□□□□□ -1.11
CTNNA1-212ENST00000518919 PXYLP1Q8TE99 480 aa8.09□□□□□ -1.11
CTNNA1-212ENST00000518919 POLR3EQ9NVU0 708 aa8.09□□□□□ -1.11
CTNNA1-212ENST00000518919 RBM27Q9P2N5 1060 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-212ENST00000518919 C6orf132Q5T0Z8 1188 aa8.08□□□□□ -1.12
CTNNA1-212ENST00000518919 MYSM1Q5VVJ2 828 aa8.08□□□□□ -1.12
CTNNA1-212ENST00000518919 PROSER2Q86WR7 435 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-212ENST00000518919 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
CTNNA1-212ENST00000518919 PROCA1Q8NCQ7 364 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-212ENST00000518919 RAD21O60216 631 aa8.07□□□□□ -1.12
CTNNA1-212ENST00000518919 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
CTNNA1-212ENST00000518919 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
CTNNA1-212ENST00000518919 RSF1Q96T23 1441 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-212ENST00000518919 KDM4FA0A1W2PPD8 638 aa8.06□□□□□ -1.12
CTNNA1-212ENST00000518919 TTC13Q8NBP0 860 aa8.05□□□□□ -1.12
CTNNA1-212ENST00000518919 RBM46Q8TBY0 533 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-212ENST00000518919 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
CTNNA1-212ENST00000518919 TBC1D2Q9BYX2 928 aa8.05□□□□□ -1.12
CTNNA1-212ENST00000518919 SPDYE5A6NIY4 337 aa8.04□□□□□ -1.12
CTNNA1-212ENST00000518919 TRIM26Q12899 539 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-212ENST00000518919 DIXDC1Q155Q3 683 aa8.04□□□□□ -1.12
CTNNA1-212ENST00000518919 POM121Q96HA1 1249 aa8.04□□□□□ -1.12
CTNNA1-212ENST00000518919 ADAM33Q9BZ11 813 aa8.04□□□□□ -1.12
CTNNA1-212ENST00000518919 PRSS12P56730 875 aa8.03□□□□□ -1.12
CTNNA1-212ENST00000518919 NUDT7P0C024 238 aa8.02□□□□□ -1.13
CTNNA1-212ENST00000518919 CDCA7LQ96GN5 454 aa8.02□□□□□ -1.13
CTNNA1-212ENST00000518919 CECR2Q9BXF3 1484 aa8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 POTEIP0CG38 1075 aa8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 RFC5P40937 340 aa8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 ZNF777Q9ULD5 760 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-212ENST00000518919 DOK7Q18PE1 504 aa8□□□□□ -1.13
CTNNA1-212ENST00000518919 BANK1Q8NDB2 785 aa8□□□□□ -1.13
CTNNA1-212ENST00000518919 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
CTNNA1-212ENST00000518919 PDIA4P13667 645 aaKnown RBP7.99□□□□□ -1.13
CTNNA1-212ENST00000518919 FNBP4Q8N3X1 1017 aaPredicted RBP7.99□□□□□ -1.13
CTNNA1-212ENST00000518919 KHSRPQ92945 711 aaKnown RBP eCLIP7.99□□□□□ -1.132e-12■■■■□ 20.7
CTNNA1-212ENST00000518919 LIMD1Q9UGP4 676 aa7.99□□□□□ -1.13
CTNNA1-212ENST00000518919 COG6Q9Y2V7 657 aa7.99□□□□□ -1.13
CTNNA1-212ENST00000518919 UNC13AQ9UPW8 1703 aa7.98□□□□□ -1.13
CTNNA1-212ENST00000518919 MROH2BQ7Z745 1585 aa7.98□□□□□ -1.13
CTNNA1-212ENST00000518919 RCCD1A6NED2 376 aa7.98□□□□□ -1.13
CTNNA1-212ENST00000518919 ARSIQ5FYB1 569 aa7.98□□□□□ -1.13
CTNNA1-212ENST00000518919 SNRKQ9NRH2 765 aa7.98□□□□□ -1.13
CTNNA1-212ENST00000518919 TMEM259Q4ZIN3 620 aa7.97□□□□□ -1.13
CTNNA1-212ENST00000518919 RIC3Q7Z5B4 369 aa7.97□□□□□ -1.13
CTNNA1-212ENST00000518919 SULF1Q8IWU6 871 aa7.97□□□□□ -1.13
CTNNA1-212ENST00000518919 SPIRE2Q8WWL2 714 aa7.97□□□□□ -1.13
CTNNA1-212ENST00000518919 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms