RNA–Protein interactions for RNA: ENST00000518858.1

CLVS1-204, Transcript of clavesin 1, humanhuman

TSL 2

Gene CLVS1, Length 2,980 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-204ENST00000518858 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
CLVS1-204ENST00000518858 LRRIQ1Q96JM4 1722 aa11.09□□□□□ -0.63
CLVS1-204ENST00000518858 WASHC2CQ9Y4E1 1318 aa11.09□□□□□ -0.63
CLVS1-204ENST00000518858 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
CLVS1-204ENST00000518858 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
CLVS1-204ENST00000518858 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
CLVS1-204ENST00000518858 CCDC184Q52MB2 194 aa11.07□□□□□ -0.64
CLVS1-204ENST00000518858 ZMYND15Q9H091 742 aa11.06□□□□□ -0.64
CLVS1-204ENST00000518858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLVS1-204ENST00000518858 PODXL2Q9NZ53 605 aa11.05□□□□□ -0.64
CLVS1-204ENST00000518858 RAB3GAP2Q9H2M9 1393 aa11.05□□□□□ -0.64
CLVS1-204ENST00000518858 TTC37Q6PGP7 1564 aa11.05□□□□□ -0.64
CLVS1-204ENST00000518858 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
CLVS1-204ENST00000518858 FYCO1Q9BQS8 1478 aa11.04□□□□□ -0.64
CLVS1-204ENST00000518858 NEO1Q92859 1461 aa11.03□□□□□ -0.64
CLVS1-204ENST00000518858 PHLDB1Q86UU1 1377 aa11.03□□□□□ -0.64
CLVS1-204ENST00000518858 FAM9BQ8IZU0 186 aa11.03□□□□□ -0.64
CLVS1-204ENST00000518858 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
CLVS1-204ENST00000518858 TROQ12816 1431 aaPredicted RBP11.02□□□□□ -0.65
CLVS1-204ENST00000518858 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
CLVS1-204ENST00000518858 GSE1Q14687 1217 aa11.01□□□□□ -0.65
CLVS1-204ENST00000518858 KIF14Q15058 1648 aa11.01□□□□□ -0.65
CLVS1-204ENST00000518858 FRAT1Q92837 279 aaPredicted RBP11□□□□□ -0.65
CLVS1-204ENST00000518858 CFAP74Q9C0B2 1584 aa11□□□□□ -0.65
CLVS1-204ENST00000518858 RSPH6AQ9H0K4 717 aa11□□□□□ -0.65
CLVS1-204ENST00000518858 FANCAO15360 1455 aa11□□□□□ -0.65
CLVS1-204ENST00000518858 USP35Q9P2H5 1018 aa11□□□□□ -0.65
CLVS1-204ENST00000518858 MYO5CQ9NQX4 1742 aa11□□□□□ -0.65
CLVS1-204ENST00000518858 PLCH2O75038 1416 aa10.99□□□□□ -0.65
CLVS1-204ENST00000518858 AKNAQ7Z591 1439 aa10.99□□□□□ -0.65
CLVS1-204ENST00000518858 RAPGEF3O95398 923 aa10.98□□□□□ -0.65
CLVS1-204ENST00000518858 FRMPD1Q5SYB0 1578 aa10.97□□□□□ -0.65
CLVS1-204ENST00000518858 RRBP1Q9P2E9 1410 aaKnown RBP10.97□□□□□ -0.65
CLVS1-204ENST00000518858 CCNB3Q8WWL7 1395 aa10.96□□□□□ -0.65
CLVS1-204ENST00000518858 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
CLVS1-204ENST00000518858 RICTORQ6R327 1708 aa10.96□□□□□ -0.65
CLVS1-204ENST00000518858 DENND4BO75064 1496 aaPredicted RBP10.95□□□□□ -0.66
CLVS1-204ENST00000518858 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
CLVS1-204ENST00000518858 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
CLVS1-204ENST00000518858 GLIPR1L2Q4G1C9 344 aa10.95□□□□□ -0.66
CLVS1-204ENST00000518858 CDC42BPBQ9Y5S2 1711 aa10.94□□□□□ -0.66
CLVS1-204ENST00000518858 SLC4A3P48751 1232 aa10.94□□□□□ -0.66
CLVS1-204ENST00000518858 EFCAB2Q5VUJ9 269 aa10.94□□□□□ -0.66
CLVS1-204ENST00000518858 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
CLVS1-204ENST00000518858 PPM1GO15355 546 aaPredicted RBP10.94□□□□□ -0.66
CLVS1-204ENST00000518858 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
CLVS1-204ENST00000518858 ARHGAP5Q13017 1502 aa10.94□□□□□ -0.66
CLVS1-204ENST00000518858 NFKBIBQ15653 356 aa10.93□□□□□ -0.66
CLVS1-204ENST00000518858 CDC42BPAQ5VT25 1732 aa10.93□□□□□ -0.66
CLVS1-204ENST00000518858 PREX2Q70Z35 1606 aa10.93□□□□□ -0.66
CLVS1-204ENST00000518858 SCAPERQ9BY12 1400 aa10.92□□□□□ -0.66
CLVS1-204ENST00000518858 ABCB7O75027 752 aa10.91□□□□□ -0.66
CLVS1-204ENST00000518858 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
CLVS1-204ENST00000518858 MTUS2Q5JR59 1369 aa10.91□□□□□ -0.66
CLVS1-204ENST00000518858 FAM43AQ8N2R8 423 aa10.91□□□□□ -0.66
CLVS1-204ENST00000518858 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
CLVS1-204ENST00000518858 ZMYM4Q5VZL5 1548 aa10.9□□□□□ -0.66
CLVS1-204ENST00000518858 POGZQ7Z3K3 1410 aa10.9□□□□□ -0.66
CLVS1-204ENST00000518858 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
CLVS1-204ENST00000518858 PDE4AP27815 886 aa10.9□□□□□ -0.66
CLVS1-204ENST00000518858 ARHGEF40Q8TER5 1519 aa10.89□□□□□ -0.67
CLVS1-204ENST00000518858 SETD5Q9C0A6 1442 aa10.89□□□□□ -0.67
CLVS1-204ENST00000518858 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
CLVS1-204ENST00000518858 GPATCH8Q9UKJ3 1502 aaKnown RBP10.88□□□□□ -0.67
CLVS1-204ENST00000518858 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
CLVS1-204ENST00000518858 CAPN15O75808 1086 aa10.88□□□□□ -0.67
CLVS1-204ENST00000518858 RRAGDQ9NQL2 400 aaPredicted RBP10.88□□□□□ -0.67
CLVS1-204ENST00000518858 MAGI2Q86UL8 1455 aa10.87□□□□□ -0.67
CLVS1-204ENST00000518858 ZFYVE16Q7Z3T8 1539 aa10.87□□□□□ -0.67
CLVS1-204ENST00000518858 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
CLVS1-204ENST00000518858 ZNF518AQ6AHZ1 1483 aa10.87□□□□□ -0.67
CLVS1-204ENST00000518858 A0A0U1RQG5 324 aaPredicted RBP10.86□□□□□ -0.67
CLVS1-204ENST00000518858 ABCC1P33527 1531 aa10.86□□□□□ -0.67
CLVS1-204ENST00000518858 YEATS2Q9ULM3 1422 aa10.86□□□□□ -0.67
CLVS1-204ENST00000518858 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
CLVS1-204ENST00000518858 AFAP1Q8N556 730 aa10.86□□□□□ -0.67
CLVS1-204ENST00000518858 FAM50AQ14320 339 aaKnown RBP10.86□□□□□ -0.67
CLVS1-204ENST00000518858 ARHGEF12Q9NZN5 1544 aa10.85□□□□□ -0.67
CLVS1-204ENST00000518858 KDM5CP41229 1560 aa10.85□□□□□ -0.67
CLVS1-204ENST00000518858 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
CLVS1-204ENST00000518858 ZNF777Q9ULD5 760 aaPredicted RBP10.85□□□□□ -0.67
CLVS1-204ENST00000518858 TONSLQ96HA7 1378 aa10.85□□□□□ -0.67
CLVS1-204ENST00000518858 SAMD9LQ8IVG5 1584 aa10.85□□□□□ -0.67
CLVS1-204ENST00000518858 BACH2Q9BYV9 841 aa10.85□□□□□ -0.67
CLVS1-204ENST00000518858 ARID4BQ4LE39 1312 aaPredicted RBP10.85□□□□□ -0.67
CLVS1-204ENST00000518858 FRAT2O75474 233 aaPredicted RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 DAXXQ9UER7 740 aaPredicted RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 SUPT6HQ7KZ85 1726 aaKnown RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 NKX1-1Q15270 411 aaPredicted RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
CLVS1-204ENST00000518858 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
CLVS1-204ENST00000518858 SIGLEC1Q9BZZ2 1709 aa10.84□□□□□ -0.67
CLVS1-204ENST00000518858 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
CLVS1-204ENST00000518858 NAP1L5Q96NT1 182 aaPredicted RBP10.83□□□□□ -0.68
CLVS1-204ENST00000518858 ADAMTSL3P82987 1691 aa10.83□□□□□ -0.68
CLVS1-204ENST00000518858 HECW2Q9P2P5 1572 aa10.83□□□□□ -0.68
CLVS1-204ENST00000518858 PRKRIP1Q9H875 184 aaPredicted RBP10.83□□□□□ -0.68
CLVS1-204ENST00000518858 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
CLVS1-204ENST00000518858 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms