RNA–Protein interactions for RNA: ENST00000518285.1

FAM49B-207, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-207ENST00000518285 NCKAP5LQ9HCH0 1330 aa29.13■■■□□ 2.25
FAM49B-207ENST00000518285 RRBP1Q9P2E9 1410 aaKnown RBP29.11■■■□□ 2.25
FAM49B-207ENST00000518285 DISP3Q9P2K9 1392 aa29.1■■■□□ 2.25
FAM49B-207ENST00000518285 ABCC5O15440 1437 aa29.06■■■□□ 2.24
FAM49B-207ENST00000518285 PTPRKQ15262 1439 aa29.06■■■□□ 2.24
FAM49B-207ENST00000518285 DAPK1P53355 1430 aa29.05■■■□□ 2.24
FAM49B-207ENST00000518285 MYO3AQ8NEV4 1616 aa29.05■■■□□ 2.24
FAM49B-207ENST00000518285 ADGBQ8N7X0 1667 aa29.04■■■□□ 2.24
FAM49B-207ENST00000518285 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
FAM49B-207ENST00000518285 DNMT1P26358 1616 aaKnown RBP29.03■■■□□ 2.24
FAM49B-207ENST00000518285 ZNF335Q9H4Z2 1342 aaPredicted RBP29.02■■■□□ 2.24
FAM49B-207ENST00000518285 ILDR2Q71H61 639 aa29.02■■■□□ 2.24
FAM49B-207ENST00000518285 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
FAM49B-207ENST00000518285 CEP170BQ9Y4F5 1589 aaPredicted RBP29.01■■■□□ 2.23
FAM49B-207ENST00000518285 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
FAM49B-207ENST00000518285 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
FAM49B-207ENST00000518285 PKD2Q13563 968 aa28.97■■■□□ 2.23
FAM49B-207ENST00000518285 IQSEC2Q5JU85 1478 aa28.97■■■□□ 2.23
FAM49B-207ENST00000518285 DHX29Q7Z478 1369 aaKnown RBP28.96■■■□□ 2.23
FAM49B-207ENST00000518285 PLA2R1Q13018 1463 aa28.96■■■□□ 2.23
FAM49B-207ENST00000518285 ANKRD30AQ9BXX3 1397 aa28.95■■■□□ 2.22
FAM49B-207ENST00000518285 KIF3BO15066 747 aa28.94■■■□□ 2.22
FAM49B-207ENST00000518285 CROCC2H7BZ55 1655 aa28.92■■■□□ 2.22
FAM49B-207ENST00000518285 FBXO31Q5XUX0 539 aaPredicted RBP28.91■■■□□ 2.22
FAM49B-207ENST00000518285 CHIC2Q9UKJ5 165 aa28.91■■■□□ 2.22
FAM49B-207ENST00000518285 UBAP1LF5GYI3 381 aa28.89■■■□□ 2.22
FAM49B-207ENST00000518285 ITGAEP38570 1179 aa28.89■■■□□ 2.22
FAM49B-207ENST00000518285 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
FAM49B-207ENST00000518285 A2ML1A8K2U0 1454 aa28.88■■■□□ 2.21
FAM49B-207ENST00000518285 ADGRL2O95490 1459 aa28.88■■■□□ 2.21
FAM49B-207ENST00000518285 SPATA31D1Q6ZQQ2 1576 aa28.88■■■□□ 2.21
FAM49B-207ENST00000518285 RRP7BPQ9NSQ0 103 aa28.86■■■□□ 2.21
FAM49B-207ENST00000518285 KIF15Q9NS87 1388 aa28.86■■■□□ 2.21
FAM49B-207ENST00000518285 TNRQ92752 1358 aa28.84■■■□□ 2.21
FAM49B-207ENST00000518285 WASHC2CQ9Y4E1 1318 aa28.83■■■□□ 2.21
FAM49B-207ENST00000518285 DUOX2Q9NRD8 1548 aa28.83■■■□□ 2.21
FAM49B-207ENST00000518285 KDM5DQ9BY66 1539 aa28.8■■■□□ 2.2
FAM49B-207ENST00000518285 SOCS7O14512 581 aa28.8■■■□□ 2.2
FAM49B-207ENST00000518285 PZPP20742 1482 aa28.79■■■□□ 2.2
FAM49B-207ENST00000518285 ERBINQ96RT1 1412 aa28.77■■■□□ 2.2
FAM49B-207ENST00000518285 POLR1AO95602 1720 aaPredicted RBP28.73■■■□□ 2.19
FAM49B-207ENST00000518285 NEURL4Q96JN8 1562 aa28.73■■■□□ 2.19
FAM49B-207ENST00000518285 FAM135AQ9P2D6 1515 aa28.71■■■□□ 2.19
FAM49B-207ENST00000518285 SCAF1Q9H7N4 1312 aaKnown RBP28.7■■■□□ 2.19
FAM49B-207ENST00000518285 ANKRD50Q9ULJ7 1429 aa28.7■■■□□ 2.19
FAM49B-207ENST00000518285 ANKLE2Q86XL3 938 aa28.7■■■□□ 2.18
FAM49B-207ENST00000518285 EIF2AK4Q9P2K8 1649 aaKnown RBP28.69■■■□□ 2.18
FAM49B-207ENST00000518285 THEMISQ8N1K5 641 aaPredicted RBP28.68■■■□□ 2.18
FAM49B-207ENST00000518285 PIP4K2BP78356 416 aa28.67■■■□□ 2.18
FAM49B-207ENST00000518285 UGGT1Q9NYU2 1555 aa28.66■■■□□ 2.18
FAM49B-207ENST00000518285 NLRP1Q9C000 1473 aa28.65■■■□□ 2.18
FAM49B-207ENST00000518285 HFM1A2PYH4 1435 aa28.64■■■□□ 2.18
FAM49B-207ENST00000518285 ACIN1Q9UKV3 1341 aaKnown RBP28.63■■■□□ 2.17
FAM49B-207ENST00000518285 CPS1P31327 1500 aa28.63■■■□□ 2.17
FAM49B-207ENST00000518285 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
FAM49B-207ENST00000518285 NAIPQ13075 1403 aa28.61■■■□□ 2.17
FAM49B-207ENST00000518285 HSPA1LP34931 641 aa28.61■■■□□ 2.17
FAM49B-207ENST00000518285 NPHP4O75161 1426 aaPredicted RBP28.6■■■□□ 2.17
FAM49B-207ENST00000518285 ABCC3O15438 1527 aa28.6■■■□□ 2.17
FAM49B-207ENST00000518285 TOM1O60784 492 aa28.6■■■□□ 2.17
FAM49B-207ENST00000518285 RNF17Q9BXT8 1623 aaKnown RBP28.6■■■□□ 2.17
FAM49B-207ENST00000518285 KANK1Q14678 1352 aa28.59■■■□□ 2.17
FAM49B-207ENST00000518285 VWDEQ8N2E2 1590 aa28.58■■■□□ 2.17
FAM49B-207ENST00000518285 MED14O60244 1454 aa28.55■■■□□ 2.16
FAM49B-207ENST00000518285 DEPDC5O75140 1603 aa28.54■■■□□ 2.16
FAM49B-207ENST00000518285 ERVK-7P63135 1459 aa28.53■■■□□ 2.16
FAM49B-207ENST00000518285 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
FAM49B-207ENST00000518285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.53■■■□□ 2.16
FAM49B-207ENST00000518285 ZC3H13Q5T200 1668 aaKnown RBP28.53■■■□□ 2.16
FAM49B-207ENST00000518285 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
FAM49B-207ENST00000518285 IQGAP1P46940 1657 aa28.51■■■□□ 2.16
FAM49B-207ENST00000518285 GCC2Q8IWJ2 1684 aa28.51■■■□□ 2.16
FAM49B-207ENST00000518285 CEP152O94986 1710 aa28.51■■■□□ 2.15
FAM49B-207ENST00000518285 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.15
FAM49B-207ENST00000518285 PRDM15P57071 1507 aaPredicted RBP28.5■■■□□ 2.15
FAM49B-207ENST00000518285 HRCP23327 699 aa28.47■■■□□ 2.15
FAM49B-207ENST00000518285 SENP3Q9H4L4 574 aaPredicted RBP28.47■■■□□ 2.15
FAM49B-207ENST00000518285 STRCP1A6NGW2 1772 aa28.45■■■□□ 2.14
FAM49B-207ENST00000518285 NUP155O75694 1391 aa28.44■■■□□ 2.14
FAM49B-207ENST00000518285 MED1Q15648 1581 aaPredicted RBP28.44■■■□□ 2.14
FAM49B-207ENST00000518285 ALKQ9UM73 1620 aa28.43■■■□□ 2.14
FAM49B-207ENST00000518285 UNC13BO14795 1591 aa28.43■■■□□ 2.14
FAM49B-207ENST00000518285 UBR1Q8IWV7 1749 aa28.42■■■□□ 2.14
FAM49B-207ENST00000518285 LMTK2Q8IWU2 1503 aa28.41■■■□□ 2.14
FAM49B-207ENST00000518285 LRRC7Q96NW7 1537 aa28.41■■■□□ 2.14
FAM49B-207ENST00000518285 TRIM52Q96A61 297 aa28.4■■■□□ 2.14
FAM49B-207ENST00000518285 LTKP29376 864 aa28.39■■■□□ 2.14
FAM49B-207ENST00000518285 ARHGAP31Q2M1Z3 1444 aa28.38■■■□□ 2.13
FAM49B-207ENST00000518285 TXNDC2Q86VQ3 553 aa28.38■■■□□ 2.13
FAM49B-207ENST00000518285 SCAF11Q99590 1463 aaKnown RBP28.38■■■□□ 2.13
FAM49B-207ENST00000518285 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
FAM49B-207ENST00000518285 IQGAP3Q86VI3 1631 aa28.32■■■□□ 2.12
FAM49B-207ENST00000518285 ARHGAP23Q9P227 1491 aa28.32■■■□□ 2.12
FAM49B-207ENST00000518285 SYNMO15061 1565 aa28.31■■■□□ 2.12
FAM49B-207ENST00000518285 SLIT1O75093 1534 aa28.3■■■□□ 2.12
FAM49B-207ENST00000518285 PHF23Q9BUL5 403 aaPredicted RBP28.3■■■□□ 2.12
FAM49B-207ENST00000518285 STAG3Q9UJ98 1225 aa28.3■■■□□ 2.12
FAM49B-207ENST00000518285 EID1Q9Y6B2 187 aa28.3■■■□□ 2.12
FAM49B-207ENST00000518285 RPRD2Q5VT52 1461 aaKnown RBP28.29■■■□□ 2.12
FAM49B-207ENST00000518285 PIK3C2BO00750 1634 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms