RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-205ENST00000518170 CCDC88BA6NC98 1476 aa12.29□□□□□ -0.44
EFCAB13-205ENST00000518170 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
EFCAB13-205ENST00000518170 EVI5O60447 810 aa12.29□□□□□ -0.44
EFCAB13-205ENST00000518170 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
EFCAB13-205ENST00000518170 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
EFCAB13-205ENST00000518170 YTHDC1Q96MU7 727 aaKnown RBP12.28□□□□□ -0.44
EFCAB13-205ENST00000518170 ABCC8Q09428 1581 aa12.27□□□□□ -0.44
EFCAB13-205ENST00000518170 SPNS2Q8IVW8 549 aa12.27□□□□□ -0.45
EFCAB13-205ENST00000518170 KDM2AQ9Y2K7 1162 aa12.26□□□□□ -0.45
EFCAB13-205ENST00000518170 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
EFCAB13-205ENST00000518170 ANO8Q9HCE9 1232 aaPredicted RBP12.23□□□□□ -0.45
EFCAB13-205ENST00000518170 BAZ1BQ9UIG0 1483 aaKnown RBP12.22□□□□□ -0.45
EFCAB13-205ENST00000518170 CEP164Q9UPV0 1460 aa12.22□□□□□ -0.45
EFCAB13-205ENST00000518170 ANP32EQ9BTT0 268 aa12.22□□□□□ -0.45
EFCAB13-205ENST00000518170 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
EFCAB13-205ENST00000518170 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
EFCAB13-205ENST00000518170 MMRN1Q13201 1228 aa12.21□□□□□ -0.45
EFCAB13-205ENST00000518170 SOGA1O94964 1423 aa12.2□□□□□ -0.46
EFCAB13-205ENST00000518170 KCNV2Q8TDN2 545 aa12.2□□□□□ -0.46
EFCAB13-205ENST00000518170 SUPT16HQ9Y5B9 1047 aaKnown RBP12.2□□□□□ -0.46
EFCAB13-205ENST00000518170 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
EFCAB13-205ENST00000518170 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-205ENST00000518170 ZNF454Q8N9F8 522 aa12.18□□□□□ -0.46
EFCAB13-205ENST00000518170 ARIH1Q9Y4X5 557 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-205ENST00000518170 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
EFCAB13-205ENST00000518170 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
EFCAB13-205ENST00000518170 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
EFCAB13-205ENST00000518170 PBX2P40425 430 aa12.15□□□□□ -0.46
EFCAB13-205ENST00000518170 PDIA6Q15084 440 aa12.15□□□□□ -0.46
EFCAB13-205ENST00000518170 FOSBP53539 338 aa12.14□□□□□ -0.47
EFCAB13-205ENST00000518170 CLIP1P30622 1438 aa12.13□□□□□ -0.47
EFCAB13-205ENST00000518170 DDX12PQ92771 950 aa12.13□□□□□ -0.47
EFCAB13-205ENST00000518170 JPH4Q96JJ6 628 aa12.13□□□□□ -0.47
EFCAB13-205ENST00000518170 UBTFP17480 764 aaKnown RBP12.11□□□□□ -0.47
EFCAB13-205ENST00000518170 PTGER2P43116 358 aa12.1□□□□□ -0.47
EFCAB13-205ENST00000518170 AXIN2Q9Y2T1 843 aa12.1□□□□□ -0.47
EFCAB13-205ENST00000518170 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
EFCAB13-205ENST00000518170 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
EFCAB13-205ENST00000518170 PHF14O94880 888 aa12.09□□□□□ -0.47
EFCAB13-205ENST00000518170 LSM11P83369 360 aaKnown RBP eCLIP12.09□□□□□ -0.47
EFCAB13-205ENST00000518170 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
EFCAB13-205ENST00000518170 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
EFCAB13-205ENST00000518170 CUX2O14529 1486 aa12.08□□□□□ -0.47
EFCAB13-205ENST00000518170 DHX57Q6P158 1386 aaKnown RBP12.08□□□□□ -0.48
EFCAB13-205ENST00000518170 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
EFCAB13-205ENST00000518170 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
EFCAB13-205ENST00000518170 TYW1BQ6NUM6 668 aa12.07□□□□□ -0.48
EFCAB13-205ENST00000518170 POTEEQ6S8J3 1075 aa12.07□□□□□ -0.48
EFCAB13-205ENST00000518170 ARHGAP33O14559 1287 aa12.06□□□□□ -0.48
EFCAB13-205ENST00000518170 EPAS1Q99814 870 aa12.06□□□□□ -0.48
EFCAB13-205ENST00000518170 ADAM33Q9BZ11 813 aa12.05□□□□□ -0.48
EFCAB13-205ENST00000518170 PSEN2P49810 448 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 NBR1Q14596 966 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 KCNH8Q96L42 1107 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 KCNK17Q96T54 332 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 BCL2L12Q9HB09 334 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 PEG3Q9GZU2 1588 aa12.04□□□□□ -0.48
EFCAB13-205ENST00000518170 SYNJ1O43426 1573 aa12.02□□□□□ -0.49
EFCAB13-205ENST00000518170 PTPREP23469 700 aa12.02□□□□□ -0.49
EFCAB13-205ENST00000518170 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
EFCAB13-205ENST00000518170 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
EFCAB13-205ENST00000518170 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
EFCAB13-205ENST00000518170 SEMA3EO15041 775 aa12□□□□□ -0.49
EFCAB13-205ENST00000518170 RRBP1Q9P2E9 1410 aaKnown RBP12□□□□□ -0.49
EFCAB13-205ENST00000518170 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
EFCAB13-205ENST00000518170 DMRTA1Q5VZB9 504 aa11.99□□□□□ -0.49
EFCAB13-205ENST00000518170 MAP3K7O43318 606 aa11.97□□□□□ -0.49
EFCAB13-205ENST00000518170 SLC24A1O60721 1099 aa11.97□□□□□ -0.49
EFCAB13-205ENST00000518170 OSBPP22059 807 aa11.96□□□□□ -0.49
EFCAB13-205ENST00000518170 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
EFCAB13-205ENST00000518170 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
EFCAB13-205ENST00000518170 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
EFCAB13-205ENST00000518170 UNC13AQ9UPW8 1703 aa11.94□□□□□ -0.5
EFCAB13-205ENST00000518170 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
EFCAB13-205ENST00000518170 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
EFCAB13-205ENST00000518170 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
EFCAB13-205ENST00000518170 TK2O00142 265 aa11.92□□□□□ -0.5
EFCAB13-205ENST00000518170 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
EFCAB13-205ENST00000518170 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
EFCAB13-205ENST00000518170 TOP2BQ02880 1626 aa11.91□□□□□ -0.5
EFCAB13-205ENST00000518170 COL9A1P20849 921 aa11.91□□□□□ -0.5
EFCAB13-205ENST00000518170 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
EFCAB13-205ENST00000518170 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
EFCAB13-205ENST00000518170 NEFLP07196 543 aa11.89□□□□□ -0.51
EFCAB13-205ENST00000518170 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
EFCAB13-205ENST00000518170 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
EFCAB13-205ENST00000518170 VPS9D1Q9Y2B5 631 aa11.88□□□□□ -0.51
EFCAB13-205ENST00000518170 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
EFCAB13-205ENST00000518170 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
EFCAB13-205ENST00000518170 SLC4A5Q9BY07 1137 aa11.86□□□□□ -0.51
EFCAB13-205ENST00000518170 MAPKBP1O60336 1514 aa11.86□□□□□ -0.51
EFCAB13-205ENST00000518170 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
EFCAB13-205ENST00000518170 CCER2I3L3R5 266 aa11.85□□□□□ -0.51
EFCAB13-205ENST00000518170 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
EFCAB13-205ENST00000518170 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
EFCAB13-205ENST00000518170 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
EFCAB13-205ENST00000518170 NUTM2FA1L443 756 aa11.83□□□□□ -0.52
EFCAB13-205ENST00000518170 RBM19Q9Y4C8 960 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms