RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 IQGAP3Q86VI3 1631 aa33.42■■■□□ 2.94
SLIT3-204ENST00000518140 KIF3BO15066 747 aa33.42■■■□□ 2.94
SLIT3-204ENST00000518140 TEX14Q8IWB6 1497 aa33.42■■■□□ 2.94
SLIT3-204ENST00000518140 MLH3Q9UHC1 1453 aa33.39■■■□□ 2.94
SLIT3-204ENST00000518140 HIRIP3Q9BW71 556 aaPredicted RBP33.35■■■□□ 2.93
SLIT3-204ENST00000518140 PLA2R1Q13018 1463 aa33.35■■■□□ 2.93
SLIT3-204ENST00000518140 NBPF8Q3BBV2 869 aa33.33■■■□□ 2.93
SLIT3-204ENST00000518140 A2MP01023 1474 aa33.32■■■□□ 2.93
SLIT3-204ENST00000518140 TSPOAP1O95153 1857 aa33.32■■■□□ 2.92
SLIT3-204ENST00000518140 HECW2Q9P2P5 1572 aa33.32■■■□□ 2.92
SLIT3-204ENST00000518140 DEPDC5O75140 1603 aa33.3■■■□□ 2.92
SLIT3-204ENST00000518140 PPRC1Q5VV67 1664 aaKnown RBP33.28■■■□□ 2.92
SLIT3-204ENST00000518140 RICTORQ6R327 1708 aa33.27■■■□□ 2.92
SLIT3-204ENST00000518140 FRMPD1Q5SYB0 1578 aa33.26■■■□□ 2.92
SLIT3-204ENST00000518140 ABCA6Q8N139 1617 aa33.25■■■□□ 2.91
SLIT3-204ENST00000518140 EIF2AK4Q9P2K8 1649 aaKnown RBP33.25■■■□□ 2.91
SLIT3-204ENST00000518140 MROH1Q8NDA8 1641 aa33.24■■■□□ 2.91
SLIT3-204ENST00000518140 CCDC144AA2RUR9 1427 aa33.22■■■□□ 2.91
SLIT3-204ENST00000518140 KANK1Q14678 1352 aa33.22■■■□□ 2.91
SLIT3-204ENST00000518140 VWDEQ8N2E2 1590 aa33.22■■■□□ 2.91
SLIT3-204ENST00000518140 KIF13AQ9H1H9 1805 aa33.2■■■□□ 2.91
SLIT3-204ENST00000518140 YEATS2Q9ULM3 1422 aa33.2■■■□□ 2.91
SLIT3-204ENST00000518140 PRDM15P57071 1507 aaPredicted RBP33.19■■■□□ 2.9
SLIT3-204ENST00000518140 E9PCH4 1651 aa33.18■■■□□ 2.9
SLIT3-204ENST00000518140 ATP10AO60312 1499 aa33.17■■■□□ 2.9
SLIT3-204ENST00000518140 DIP2CQ9Y2E4 1556 aa33.16■■■□□ 2.9
SLIT3-204ENST00000518140 GGT6Q6P531 493 aa33.16■■■□□ 2.9
SLIT3-204ENST00000518140 ZNF326Q5BKZ1 582 aaKnown RBP33.16■■■□□ 2.9
SLIT3-204ENST00000518140 KDM2AQ9Y2K7 1162 aa33.14■■■□□ 2.9
SLIT3-204ENST00000518140 RGL3Q3MIN7 710 aa33.14■■■□□ 2.9
SLIT3-204ENST00000518140 DCAF11Q8TEB1 546 aa33.13■■■□□ 2.89
SLIT3-204ENST00000518140 TET3O43151 1660 aa33.12■■■□□ 2.89
SLIT3-204ENST00000518140 HSPA5P11021 654 aaKnown RBP33.11■■■□□ 2.89
SLIT3-204ENST00000518140 MIER1Q8N108 512 aa33.11■■■□□ 2.89
SLIT3-204ENST00000518140 RNF17Q9BXT8 1623 aaKnown RBP33.1■■■□□ 2.89
SLIT3-204ENST00000518140 COL17A1Q9UMD9 1497 aaPredicted RBP33.08■■■□□ 2.89
SLIT3-204ENST00000518140 SCAF1Q9H7N4 1312 aaKnown RBP33.08■■■□□ 2.89
SLIT3-204ENST00000518140 PTPRTO14522 1441 aa33.07■■■□□ 2.89
SLIT3-204ENST00000518140 ZMYM4Q5VZL5 1548 aa33.05■■■□□ 2.88
SLIT3-204ENST00000518140 EIF4G2P78344 907 aaKnown RBP eCLIP33.05■■■□□ 2.88
SLIT3-204ENST00000518140 UHRF1BP1Q6BDS2 1440 aa33.04■■■□□ 2.88
SLIT3-204ENST00000518140 BCORL1Q5H9F3 1711 aa33.02■■■□□ 2.88
SLIT3-204ENST00000518140 DDX10Q13206 875 aaKnown RBP33.01■■■□□ 2.88
SLIT3-204ENST00000518140 TRPM2O94759 1503 aa33.01■■■□□ 2.87
SLIT3-204ENST00000518140 LMTK2Q8IWU2 1503 aa33.01■■■□□ 2.87
SLIT3-204ENST00000518140 CEP152O94986 1710 aa33■■■□□ 2.87
SLIT3-204ENST00000518140 EFCAB6Q5THR3 1501 aa33■■■□□ 2.87
SLIT3-204ENST00000518140 WASHC2CQ9Y4E1 1318 aa32.99■■■□□ 2.87
SLIT3-204ENST00000518140 SPHKAPQ2M3C7 1700 aa32.99■■■□□ 2.87
SLIT3-204ENST00000518140 SPATA31E1Q6ZUB1 1445 aa32.96■■■□□ 2.87
SLIT3-204ENST00000518140 CLTCL1P53675 1640 aa32.94■■■□□ 2.86
SLIT3-204ENST00000518140 ABCC3O15438 1527 aa32.94■■■□□ 2.86
SLIT3-204ENST00000518140 NPATQ14207 1427 aa32.92■■■□□ 2.86
SLIT3-204ENST00000518140 UGGT1Q9NYU2 1555 aa32.91■■■□□ 2.86
SLIT3-204ENST00000518140 PRAG1Q86YV5 1406 aa32.9■■■□□ 2.86
SLIT3-204ENST00000518140 RALGAPBQ86X10 1494 aa32.89■■■□□ 2.86
SLIT3-204ENST00000518140 C11orf95C9JLR9 678 aaPredicted RBP32.88■■■□□ 2.85
SLIT3-204ENST00000518140 WASHC2AQ641Q2 1341 aa32.86■■■□□ 2.85
SLIT3-204ENST00000518140 CARD11Q9BXL7 1154 aa32.84■■■□□ 2.85
SLIT3-204ENST00000518140 CFAP65Q6ZU64 1925 aaKnown RBP32.84■■■□□ 2.85
SLIT3-204ENST00000518140 USP47Q96K76 1375 aa32.83■■■□□ 2.85
SLIT3-204ENST00000518140 NBPF1Q3BBV0 1214 aa32.82■■■□□ 2.85
SLIT3-204ENST00000518140 TRHP20396 242 aaPredicted RBP32.8■■■□□ 2.84
SLIT3-204ENST00000518140 CAMSAP1Q5T5Y3 1602 aa32.79■■■□□ 2.84
SLIT3-204ENST00000518140 SIGLEC1Q9BZZ2 1709 aa32.78■■■□□ 2.84
SLIT3-204ENST00000518140 ROCK2O75116 1388 aaKnown RBP32.78■■■□□ 2.84
SLIT3-204ENST00000518140 DNAJC5Q9H3Z4 198 aa32.78■■■□□ 2.84
SLIT3-204ENST00000518140 REREQ9P2R6 1566 aa32.76■■■□□ 2.84
SLIT3-204ENST00000518140 TRPM1Q7Z4N2 1603 aa32.75■■■□□ 2.83
SLIT3-204ENST00000518140 AGLP35573 1532 aa32.74■■■□□ 2.83
SLIT3-204ENST00000518140 MLECQ14165 292 aa32.73■■■□□ 2.83
SLIT3-204ENST00000518140 NOS1P29475 1434 aa32.72■■■□□ 2.83
SLIT3-204ENST00000518140 ARHGEF40Q8TER5 1519 aa32.72■■■□□ 2.83
SLIT3-204ENST00000518140 ARHGAP31Q2M1Z3 1444 aa32.72■■■□□ 2.83
SLIT3-204ENST00000518140 CNTLNQ9NXG0 1405 aa32.72■■■□□ 2.83
SLIT3-204ENST00000518140 CHGAP10645 457 aaKnown RBP32.71■■■□□ 2.83
SLIT3-204ENST00000518140 CCDC7Q96M83 1385 aa32.7■■■□□ 2.83
SLIT3-204ENST00000518140 PELP1Q8IZL8 1130 aaKnown RBP32.7■■■□□ 2.83
SLIT3-204ENST00000518140 ZC3H13Q5T200 1668 aaKnown RBP32.69■■■□□ 2.82
SLIT3-204ENST00000518140 ST20-MTHFSA0A0A6YYL1 179 aa32.68■■■□□ 2.82
SLIT3-204ENST00000518140 KIF7Q2M1P5 1343 aa32.67■■■□□ 2.82
SLIT3-204ENST00000518140 NEURL4Q96JN8 1562 aa32.67■■■□□ 2.82
SLIT3-204ENST00000518140 GPRASP1Q5JY77 1395 aa32.66■■■□□ 2.82
SLIT3-204ENST00000518140 KIF1BO60333 1816 aa32.66■■■□□ 2.82
SLIT3-204ENST00000518140 CENPBP07199 599 aaPredicted RBP32.66■■■□□ 2.82
SLIT3-204ENST00000518140 FBXO31Q5XUX0 539 aaPredicted RBP32.65■■■□□ 2.82
SLIT3-204ENST00000518140 MROH2AA6NES4 1674 aa32.65■■■□□ 2.82
SLIT3-204ENST00000518140 SYNMO15061 1565 aa32.65■■■□□ 2.82
SLIT3-204ENST00000518140 MADDQ8WXG6 1647 aa32.64■■■□□ 2.82
SLIT3-204ENST00000518140 STAC3Q96MF2 364 aa32.63■■■□□ 2.81
SLIT3-204ENST00000518140 PPP6R1Q9UPN7 881 aa32.62■■■□□ 2.81
SLIT3-204ENST00000518140 ADGRF5Q8IZF2 1346 aa32.61■■■□□ 2.81
SLIT3-204ENST00000518140 ADGRB3O60242 1522 aa32.61■■■□□ 2.81
SLIT3-204ENST00000518140 IDI1Q13907 227 aa32.61■■■□□ 2.81
SLIT3-204ENST00000518140 PIK3C2BO00750 1634 aa32.55■■■□□ 2.8
SLIT3-204ENST00000518140 ARID4BQ4LE39 1312 aaPredicted RBP32.55■■■□□ 2.8
SLIT3-204ENST00000518140 YTHDC1Q96MU7 727 aaKnown RBP32.54■■■□□ 2.8
SLIT3-204ENST00000518140 CLTCQ00610 1675 aaKnown RBP32.53■■■□□ 2.8
SLIT3-204ENST00000518140 POLR3GLQ9BT43 218 aa32.53■■■□□ 2.8
SLIT3-204ENST00000518140 MYOM2P54296 1465 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms