RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
ARFGEF1-202ENST00000517955 NAIPQ13075 1403 aa17.2■□□□□ 0.34
ARFGEF1-202ENST00000517955 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
ARFGEF1-202ENST00000517955 KIF15Q9NS87 1388 aa17.18■□□□□ 0.34
ARFGEF1-202ENST00000517955 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
ARFGEF1-202ENST00000517955 HRCP23327 699 aa17.18■□□□□ 0.34
ARFGEF1-202ENST00000517955 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
ARFGEF1-202ENST00000517955 ACIN1Q9UKV3 1341 aaKnown RBP17.17■□□□□ 0.34
ARFGEF1-202ENST00000517955 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 DIP2CQ9Y2E4 1556 aa17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 RRP7BPQ9NSQ0 103 aa17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 ATP10AO60312 1499 aa17.16■□□□□ 0.34
ARFGEF1-202ENST00000517955 YEATS2Q9ULM3 1422 aa17.15■□□□□ 0.34
ARFGEF1-202ENST00000517955 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
ARFGEF1-202ENST00000517955 ARHGEF40Q8TER5 1519 aa17.15■□□□□ 0.34
ARFGEF1-202ENST00000517955 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
ARFGEF1-202ENST00000517955 ANKRD50Q9ULJ7 1429 aa17.13■□□□□ 0.33
ARFGEF1-202ENST00000517955 A2MP01023 1474 aa17.13■□□□□ 0.33
ARFGEF1-202ENST00000517955 MYT1LQ9UL68 1186 aa17.12■□□□□ 0.33
ARFGEF1-202ENST00000517955 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
ARFGEF1-202ENST00000517955 AGLP35573 1532 aa17.11■□□□□ 0.33
ARFGEF1-202ENST00000517955 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
ARFGEF1-202ENST00000517955 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
ARFGEF1-202ENST00000517955 DEPDC5O75140 1603 aa17.04■□□□□ 0.32
ARFGEF1-202ENST00000517955 RNF17Q9BXT8 1623 aaKnown RBP17.03■□□□□ 0.32
ARFGEF1-202ENST00000517955 UNC13BO14795 1591 aa17.02■□□□□ 0.32
ARFGEF1-202ENST00000517955 KIF3BO15066 747 aa17.01■□□□□ 0.31
ARFGEF1-202ENST00000517955 KDM5DQ9BY66 1539 aa17.01■□□□□ 0.31
ARFGEF1-202ENST00000517955 SIGLEC1Q9BZZ2 1709 aa17■□□□□ 0.31
ARFGEF1-202ENST00000517955 PRDM15P57071 1507 aaPredicted RBP17■□□□□ 0.31
ARFGEF1-202ENST00000517955 VWDEQ8N2E2 1590 aa16.99■□□□□ 0.31
ARFGEF1-202ENST00000517955 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
ARFGEF1-202ENST00000517955 MROH1Q8NDA8 1641 aa16.99■□□□□ 0.31
ARFGEF1-202ENST00000517955 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.3
ARFGEF1-202ENST00000517955 NUP155O75694 1391 aa16.95■□□□□ 0.3
ARFGEF1-202ENST00000517955 LMTK2Q8IWU2 1503 aa16.95■□□□□ 0.3
ARFGEF1-202ENST00000517955 KANK1Q14678 1352 aa16.94■□□□□ 0.3
ARFGEF1-202ENST00000517955 PZPP20742 1482 aa16.93■□□□□ 0.3
ARFGEF1-202ENST00000517955 GGT6Q6P531 493 aa16.92■□□□□ 0.3
ARFGEF1-202ENST00000517955 TRIM52Q96A61 297 aa16.92■□□□□ 0.3
ARFGEF1-202ENST00000517955 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
ARFGEF1-202ENST00000517955 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
ARFGEF1-202ENST00000517955 MPHOSPH9Q99550 1183 aa16.9■□□□□ 0.3
ARFGEF1-202ENST00000517955 ABCC3O15438 1527 aa16.9■□□□□ 0.3
ARFGEF1-202ENST00000517955 FOXD4L1Q9NU39 408 aa16.89■□□□□ 0.29
ARFGEF1-202ENST00000517955 DHX57Q6P158 1386 aaKnown RBP16.89■□□□□ 0.29
ARFGEF1-202ENST00000517955 TET3O43151 1660 aa16.88■□□□□ 0.29
ARFGEF1-202ENST00000517955 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
ARFGEF1-202ENST00000517955 ARHGAP31Q2M1Z3 1444 aa16.87■□□□□ 0.29
ARFGEF1-202ENST00000517955 CNTLNQ9NXG0 1405 aa16.87■□□□□ 0.29
ARFGEF1-202ENST00000517955 RPRD2Q5VT52 1461 aaKnown RBP16.86■□□□□ 0.29
ARFGEF1-202ENST00000517955 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
ARFGEF1-202ENST00000517955 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
ARFGEF1-202ENST00000517955 EFCAB6Q5THR3 1501 aa16.85■□□□□ 0.29
ARFGEF1-202ENST00000517955 CEP152O94986 1710 aa16.84■□□□□ 0.29
ARFGEF1-202ENST00000517955 CLSPNQ9HAW4 1339 aa16.84■□□□□ 0.29
ARFGEF1-202ENST00000517955 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
ARFGEF1-202ENST00000517955 PKD2Q13563 968 aa16.83■□□□□ 0.28
ARFGEF1-202ENST00000517955 MLECQ14165 292 aa16.83■□□□□ 0.28
ARFGEF1-202ENST00000517955 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
ARFGEF1-202ENST00000517955 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
ARFGEF1-202ENST00000517955 E9PCH4 1651 aa16.81■□□□□ 0.28
ARFGEF1-202ENST00000517955 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
ARFGEF1-202ENST00000517955 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
ARFGEF1-202ENST00000517955 CLTCQ00610 1675 aaKnown RBP16.81■□□□□ 0.28
ARFGEF1-202ENST00000517955 PTPRTO14522 1441 aa16.8■□□□□ 0.28
ARFGEF1-202ENST00000517955 NPATQ14207 1427 aa16.8■□□□□ 0.28
ARFGEF1-202ENST00000517955 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
ARFGEF1-202ENST00000517955 FER1L4A9Z1Z3 1794 aa16.8■□□□□ 0.28
ARFGEF1-202ENST00000517955 ANKRD30BQ9BXX2 1392 aa16.78■□□□□ 0.28
ARFGEF1-202ENST00000517955 NOS1P29475 1434 aa16.77■□□□□ 0.27
ARFGEF1-202ENST00000517955 MADDQ8WXG6 1647 aa16.77■□□□□ 0.27
ARFGEF1-202ENST00000517955 CAPN15O75808 1086 aa16.76■□□□□ 0.27
ARFGEF1-202ENST00000517955 PLA2R1Q13018 1463 aa16.75■□□□□ 0.27
ARFGEF1-202ENST00000517955 ZBTB22O15209 634 aa16.74■□□□□ 0.27
ARFGEF1-202ENST00000517955 CCER1Q8TC90 406 aaPredicted RBP16.74■□□□□ 0.27
ARFGEF1-202ENST00000517955 SPHKAPQ2M3C7 1700 aa16.73■□□□□ 0.27
ARFGEF1-202ENST00000517955 SPATA31D1Q6ZQQ2 1576 aa16.73■□□□□ 0.27
ARFGEF1-202ENST00000517955 TRPM2O94759 1503 aa16.73■□□□□ 0.27
ARFGEF1-202ENST00000517955 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
ARFGEF1-202ENST00000517955 C3P01024 1663 aa16.72■□□□□ 0.27
ARFGEF1-202ENST00000517955 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
ARFGEF1-202ENST00000517955 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
ARFGEF1-202ENST00000517955 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
ARFGEF1-202ENST00000517955 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
ARFGEF1-202ENST00000517955 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
ARFGEF1-202ENST00000517955 PTPRMP28827 1452 aa16.68■□□□□ 0.26
ARFGEF1-202ENST00000517955 SETD1BQ9UPS6 1966 aaKnown RBP16.68■□□□□ 0.26
ARFGEF1-202ENST00000517955 PIK3C2BO00750 1634 aa16.68■□□□□ 0.26
ARFGEF1-202ENST00000517955 FBXO31Q5XUX0 539 aaPredicted RBP16.68■□□□□ 0.26
ARFGEF1-202ENST00000517955 SYNMO15061 1565 aa16.68■□□□□ 0.26
ARFGEF1-202ENST00000517955 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
ARFGEF1-202ENST00000517955 NEURL4Q96JN8 1562 aa16.67■□□□□ 0.26
ARFGEF1-202ENST00000517955 TNRQ92752 1358 aa16.64■□□□□ 0.26
ARFGEF1-202ENST00000517955 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
ARFGEF1-202ENST00000517955 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
ARFGEF1-202ENST00000517955 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
ARFGEF1-202ENST00000517955 NLRP1Q9C000 1473 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms