RNA–Protein interactions for RNA: ENST00000517656.5

CTNNA1-204, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-204ENST00000517656 TSPY10P0CW01 314 aa13.36□□□□□ -0.27
CTNNA1-204ENST00000517656 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
CTNNA1-204ENST00000517656 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
CTNNA1-204ENST00000517656 PKD2Q13563 968 aa13.34□□□□□ -0.27
CTNNA1-204ENST00000517656 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
CTNNA1-204ENST00000517656 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
CTNNA1-204ENST00000517656 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
CTNNA1-204ENST00000517656 MIA2Q96PC5 1412 aa13.33□□□□□ -0.28
CTNNA1-204ENST00000517656 A2ML1A8K2U0 1454 aa13.33□□□□□ -0.28
CTNNA1-204ENST00000517656 PZPP20742 1482 aa13.33□□□□□ -0.28
CTNNA1-204ENST00000517656 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
CTNNA1-204ENST00000517656 MAST1Q9Y2H9 1570 aa13.32□□□□□ -0.28
CTNNA1-204ENST00000517656 MYOM3Q5VTT5 1437 aa13.32□□□□□ -0.28
CTNNA1-204ENST00000517656 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
CTNNA1-204ENST00000517656 TNRQ92752 1358 aa13.32□□□□□ -0.28
CTNNA1-204ENST00000517656 FBXO31Q5XUX0 539 aaPredicted RBP13.3□□□□□ -0.28
CTNNA1-204ENST00000517656 DNMT1P26358 1616 aaKnown RBP13.3□□□□□ -0.28
CTNNA1-204ENST00000517656 RNF17Q9BXT8 1623 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-204ENST00000517656 ZNF335Q9H4Z2 1342 aaPredicted RBP13.28□□□□□ -0.28
CTNNA1-204ENST00000517656 EIF2AK4Q9P2K8 1649 aaKnown RBP13.27□□□□□ -0.29
CTNNA1-204ENST00000517656 ABCC3O15438 1527 aa13.26□□□□□ -0.29
CTNNA1-204ENST00000517656 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
CTNNA1-204ENST00000517656 APLP2Q06481 763 aa13.25□□□□□ -0.29
CTNNA1-204ENST00000517656 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
CTNNA1-204ENST00000517656 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
CTNNA1-204ENST00000517656 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
CTNNA1-204ENST00000517656 ABCC5O15440 1437 aa13.23□□□□□ -0.29
CTNNA1-204ENST00000517656 THEMISQ8N1K5 641 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-204ENST00000517656 MROH1Q8NDA8 1641 aa13.23□□□□□ -0.29
CTNNA1-204ENST00000517656 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
CTNNA1-204ENST00000517656 NEURL4Q96JN8 1562 aa13.23□□□□□ -0.29
CTNNA1-204ENST00000517656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTNNA1-204ENST00000517656 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
CTNNA1-204ENST00000517656 UGGT1Q9NYU2 1555 aa13.22□□□□□ -0.29
CTNNA1-204ENST00000517656 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
CTNNA1-204ENST00000517656 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
CTNNA1-204ENST00000517656 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
CTNNA1-204ENST00000517656 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
CTNNA1-204ENST00000517656 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.3
CTNNA1-204ENST00000517656 ERBINQ96RT1 1412 aa13.21□□□□□ -0.3
CTNNA1-204ENST00000517656 DAPK1P53355 1430 aa13.2□□□□□ -0.3
CTNNA1-204ENST00000517656 PRDM15P57071 1507 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-204ENST00000517656 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
CTNNA1-204ENST00000517656 MED14O60244 1454 aa13.19□□□□□ -0.3
CTNNA1-204ENST00000517656 UBAP1LF5GYI3 381 aa13.19□□□□□ -0.3
CTNNA1-204ENST00000517656 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
CTNNA1-204ENST00000517656 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
CTNNA1-204ENST00000517656 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-204ENST00000517656 ARHGAP31Q2M1Z3 1444 aa13.18□□□□□ -0.3
CTNNA1-204ENST00000517656 CPS1P31327 1500 aa13.18□□□□□ -0.3
CTNNA1-204ENST00000517656 DISP3Q9P2K9 1392 aa13.17□□□□□ -0.3
CTNNA1-204ENST00000517656 CEP152O94986 1710 aa13.16□□□□□ -0.3
CTNNA1-204ENST00000517656 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
CTNNA1-204ENST00000517656 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
CTNNA1-204ENST00000517656 KANK1Q14678 1352 aa13.13□□□□□ -0.31
CTNNA1-204ENST00000517656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.13□□□□□ -0.319e-8■□□□□ 9.6
CTNNA1-204ENST00000517656 IQGAP1P46940 1657 aa13.12□□□□□ -0.31
CTNNA1-204ENST00000517656 CHIC2Q9UKJ5 165 aa13.12□□□□□ -0.31
CTNNA1-204ENST00000517656 UBR1Q8IWV7 1749 aa13.12□□□□□ -0.31
CTNNA1-204ENST00000517656 LMTK2Q8IWU2 1503 aa13.12□□□□□ -0.31
CTNNA1-204ENST00000517656 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
CTNNA1-204ENST00000517656 ARHGAP23Q9P227 1491 aa13.11□□□□□ -0.31
CTNNA1-204ENST00000517656 SCAF11Q99590 1463 aaKnown RBP13.1□□□□□ -0.31
CTNNA1-204ENST00000517656 SLIT1O75093 1534 aa13.1□□□□□ -0.31
CTNNA1-204ENST00000517656 TOM1O60784 492 aa13.1□□□□□ -0.31
CTNNA1-204ENST00000517656 ILDR2Q71H61 639 aa13.09□□□□□ -0.31
CTNNA1-204ENST00000517656 LTKP29376 864 aa13.08□□□□□ -0.32
CTNNA1-204ENST00000517656 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-204ENST00000517656 PIP4K2BP78356 416 aa13.07□□□□□ -0.32
CTNNA1-204ENST00000517656 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
CTNNA1-204ENST00000517656 LRRC7Q96NW7 1537 aa13.07□□□□□ -0.32
CTNNA1-204ENST00000517656 SCAF1Q9H7N4 1312 aaKnown RBP13.07□□□□□ -0.32
CTNNA1-204ENST00000517656 TMEM2Q9UHN6 1383 aa13.07□□□□□ -0.32
CTNNA1-204ENST00000517656 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
CTNNA1-204ENST00000517656 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
CTNNA1-204ENST00000517656 EFCAB6Q5THR3 1501 aa13.06□□□□□ -0.32
CTNNA1-204ENST00000517656 SYNMO15061 1565 aa13.06□□□□□ -0.32
CTNNA1-204ENST00000517656 CFAP65Q6ZU64 1925 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 NOS1P29475 1434 aa13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 HSPA1LP34931 641 aa13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 IDI1Q13907 227 aa13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 ALKQ9UM73 1620 aa13.05□□□□□ -0.32
CTNNA1-204ENST00000517656 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
CTNNA1-204ENST00000517656 STAG3Q9UJ98 1225 aa13.04□□□□□ -0.32
CTNNA1-204ENST00000517656 KDM5AP29375 1690 aaKnown RBP13.04□□□□□ -0.32
CTNNA1-204ENST00000517656 SOCS7O14512 581 aa13.02□□□□□ -0.33
CTNNA1-204ENST00000517656 SLC52A1Q9NWF4 448 aa13.02□□□□□ -0.33
CTNNA1-204ENST00000517656 RPRD2Q5VT52 1461 aaKnown RBP13.02□□□□□ -0.33
CTNNA1-204ENST00000517656 ADGRB3O60242 1522 aa13.01□□□□□ -0.33
CTNNA1-204ENST00000517656 ROCK1Q13464 1354 aa12.99□□□□□ -0.33
CTNNA1-204ENST00000517656 TET3O43151 1660 aa12.98□□□□□ -0.33
CTNNA1-204ENST00000517656 UNC13BO14795 1591 aa12.98□□□□□ -0.33
CTNNA1-204ENST00000517656 MED1Q15648 1581 aaPredicted RBP12.97□□□□□ -0.33
CTNNA1-204ENST00000517656 KCNA6P17658 529 aa12.96□□□□□ -0.33
CTNNA1-204ENST00000517656 SLC26A8Q96RN1 970 aa12.95□□□□□ -0.34
CTNNA1-204ENST00000517656 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
CTNNA1-204ENST00000517656 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
CTNNA1-204ENST00000517656 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
CTNNA1-204ENST00000517656 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms