RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
PCM1-203ENST00000517545 GPATCH8Q9UKJ3 1502 aaKnown RBP16.38■□□□□ 0.21
PCM1-203ENST00000517545 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
PCM1-203ENST00000517545 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
PCM1-203ENST00000517545 KIAA0586Q9BVV6 1533 aa16.37■□□□□ 0.21
PCM1-203ENST00000517545 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
PCM1-203ENST00000517545 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
PCM1-203ENST00000517545 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
PCM1-203ENST00000517545 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
PCM1-203ENST00000517545 KIAA0556O60303 1618 aa16.36■□□□□ 0.21
PCM1-203ENST00000517545 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
PCM1-203ENST00000517545 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
PCM1-203ENST00000517545 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
PCM1-203ENST00000517545 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
PCM1-203ENST00000517545 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
PCM1-203ENST00000517545 E9PCH4 1651 aa16.34■□□□□ 0.21
PCM1-203ENST00000517545 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.21
PCM1-203ENST00000517545 C20orf194Q5TEA3 1177 aa16.33■□□□□ 0.21
PCM1-203ENST00000517545 PER1O15534 1290 aaPredicted RBP16.33■□□□□ 0.2
PCM1-203ENST00000517545 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
PCM1-203ENST00000517545 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
PCM1-203ENST00000517545 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
PCM1-203ENST00000517545 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
PCM1-203ENST00000517545 PLB1Q6P1J6 1458 aa16.3■□□□□ 0.2
PCM1-203ENST00000517545 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
PCM1-203ENST00000517545 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
PCM1-203ENST00000517545 DDRGK1Q96HY6 314 aa16.29■□□□□ 0.2
PCM1-203ENST00000517545 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
PCM1-203ENST00000517545 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
PCM1-203ENST00000517545 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
PCM1-203ENST00000517545 GSE1Q14687 1217 aa16.27■□□□□ 0.2
PCM1-203ENST00000517545 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
PCM1-203ENST00000517545 RGL3Q3MIN7 710 aa16.27■□□□□ 0.19
PCM1-203ENST00000517545 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
PCM1-203ENST00000517545 BLMP54132 1417 aaPredicted RBP16.25■□□□□ 0.19
PCM1-203ENST00000517545 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
PCM1-203ENST00000517545 PANK3Q9H999 370 aa16.25■□□□□ 0.19
PCM1-203ENST00000517545 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PCM1-203ENST00000517545 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
PCM1-203ENST00000517545 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
PCM1-203ENST00000517545 KDM5DQ9BY66 1539 aa16.22■□□□□ 0.19
PCM1-203ENST00000517545 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
PCM1-203ENST00000517545 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
PCM1-203ENST00000517545 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCM1-203ENST00000517545 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
PCM1-203ENST00000517545 TESK2Q96S53 571 aa16.22■□□□□ 0.19
PCM1-203ENST00000517545 C8orf34Q49A92 452 aa16.21■□□□□ 0.19
PCM1-203ENST00000517545 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
PCM1-203ENST00000517545 PTPRGP23470 1445 aa16.2■□□□□ 0.18
PCM1-203ENST00000517545 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
PCM1-203ENST00000517545 ADCY10Q96PN6 1610 aa16.2■□□□□ 0.18
PCM1-203ENST00000517545 COL17A1Q9UMD9 1497 aaPredicted RBP16.19■□□□□ 0.18
PCM1-203ENST00000517545 CENPQQ7L2Z9 268 aaPredicted RBP16.19■□□□□ 0.18
PCM1-203ENST00000517545 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
PCM1-203ENST00000517545 GRIN2AQ12879 1464 aa16.19■□□□□ 0.18
PCM1-203ENST00000517545 ZMYM4Q5VZL5 1548 aa16.18■□□□□ 0.18
PCM1-203ENST00000517545 SHANK2Q9UPX8 1470 aa16.18■□□□□ 0.18
PCM1-203ENST00000517545 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
PCM1-203ENST00000517545 FAM161AQ3B820 660 aa16.18■□□□□ 0.18
PCM1-203ENST00000517545 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
PCM1-203ENST00000517545 RGS3P49796 1198 aa16.17■□□□□ 0.18
PCM1-203ENST00000517545 CCDC144AA2RUR9 1427 aa16.17■□□□□ 0.18
PCM1-203ENST00000517545 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
PCM1-203ENST00000517545 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
PCM1-203ENST00000517545 INSRP06213 1382 aa16.16■□□□□ 0.18
PCM1-203ENST00000517545 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
PCM1-203ENST00000517545 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
PCM1-203ENST00000517545 ERBINQ96RT1 1412 aa16.15■□□□□ 0.18
PCM1-203ENST00000517545 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
PCM1-203ENST00000517545 PLEKHH2Q8IVE3 1493 aa16.14■□□□□ 0.17
PCM1-203ENST00000517545 A2MP01023 1474 aa16.14■□□□□ 0.17
PCM1-203ENST00000517545 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.173e-6■□□□□ 9
PCM1-203ENST00000517545 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
PCM1-203ENST00000517545 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
PCM1-203ENST00000517545 TMF1P82094 1093 aa16.12■□□□□ 0.17
PCM1-203ENST00000517545 SYNJ2O15056 1496 aa16.11■□□□□ 0.17
PCM1-203ENST00000517545 WDR43Q15061 677 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCM1-203ENST00000517545 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
PCM1-203ENST00000517545 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
PCM1-203ENST00000517545 ZNF521Q96K83 1311 aa16.1■□□□□ 0.17
PCM1-203ENST00000517545 GOLGA2Q08379 1002 aa16.1■□□□□ 0.17
PCM1-203ENST00000517545 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
PCM1-203ENST00000517545 ATP10BO94823 1461 aa16.09■□□□□ 0.17
PCM1-203ENST00000517545 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
PCM1-203ENST00000517545 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.16
PCM1-203ENST00000517545 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
PCM1-203ENST00000517545 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
PCM1-203ENST00000517545 SLFN5Q08AF3 891 aa16.06■□□□□ 0.16
PCM1-203ENST00000517545 KNSTRNQ9Y448 316 aa16.06■□□□□ 0.16
PCM1-203ENST00000517545 BCAR3O75815 825 aa16.06■□□□□ 0.16
PCM1-203ENST00000517545 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
PCM1-203ENST00000517545 EIF5BO60841 1220 aaKnown RBP16.05■□□□□ 0.16
PCM1-203ENST00000517545 AMER1Q5JTC6 1135 aaPredicted RBP16.05■□□□□ 0.16
PCM1-203ENST00000517545 ABCA8O94911 1581 aa16.04■□□□□ 0.16
PCM1-203ENST00000517545 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
PCM1-203ENST00000517545 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
PCM1-203ENST00000517545 IGHDP01880 384 aa16.04■□□□□ 0.16
PCM1-203ENST00000517545 USP19O94966 1318 aa16.03■□□□□ 0.16
PCM1-203ENST00000517545 ARHGEF5Q12774 1597 aa16.03■□□□□ 0.16
PCM1-203ENST00000517545 LAMC1P11047 1609 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms