RNA–Protein interactions for RNA: ENST00000517257.1

RNU6-709P-201, Transcript of RNA, U6 small nuclear 709, pseudogene, humanhuman

BASIC

Gene RNU6-709P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-709P-201ENST00000517257 NEUROD1Q13562 356 aa7.04□□□□□ -1.28
RNU6-709P-201ENST00000517257 DEPDC5O75140 1603 aa7.04□□□□□ -1.28
RNU6-709P-201ENST00000517257 DHX29Q7Z478 1369 aaKnown RBP7.04□□□□□ -1.28
RNU6-709P-201ENST00000517257 ABCA6Q8N139 1617 aa7.04□□□□□ -1.28
RNU6-709P-201ENST00000517257 ZMYM4Q5VZL5 1548 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 FAM135AQ9P2D6 1515 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 SIN3AQ96ST3 1273 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 A2MP01023 1474 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 MAGI2Q86UL8 1455 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 DIP2CQ9Y2E4 1556 aa7.03□□□□□ -1.28
RNU6-709P-201ENST00000517257 BCORL1Q5H9F3 1711 aa7.02□□□□□ -1.29
RNU6-709P-201ENST00000517257 TRHP20396 242 aaPredicted RBP7.02□□□□□ -1.29
RNU6-709P-201ENST00000517257 PKD2Q13563 968 aa7.02□□□□□ -1.29
RNU6-709P-201ENST00000517257 KANK1Q14678 1352 aa7.02□□□□□ -1.29
RNU6-709P-201ENST00000517257 RNF17Q9BXT8 1623 aaKnown RBP7.01□□□□□ -1.29
RNU6-709P-201ENST00000517257 TONSLQ96HA7 1378 aa7.01□□□□□ -1.29
RNU6-709P-201ENST00000517257 KIF3BO15066 747 aa7.01□□□□□ -1.29
RNU6-709P-201ENST00000517257 TIMELESSQ9UNS1 1208 aa7.01□□□□□ -1.29
RNU6-709P-201ENST00000517257 CEP152O94986 1710 aa7.01□□□□□ -1.29
RNU6-709P-201ENST00000517257 TET3O43151 1660 aa7□□□□□ -1.29
RNU6-709P-201ENST00000517257 CFAP65Q6ZU64 1925 aaKnown RBP7□□□□□ -1.29
RNU6-709P-201ENST00000517257 ANKRD30BQ9BXX2 1392 aa7□□□□□ -1.29
RNU6-709P-201ENST00000517257 MROH1Q8NDA8 1641 aa7□□□□□ -1.29
RNU6-709P-201ENST00000517257 PRDM15P57071 1507 aaPredicted RBP7□□□□□ -1.29
RNU6-709P-201ENST00000517257 E9PCH4 1651 aa7□□□□□ -1.29
RNU6-709P-201ENST00000517257 YEATS2Q9ULM3 1422 aa6.99□□□□□ -1.29
RNU6-709P-201ENST00000517257 VWDEQ8N2E2 1590 aa6.99□□□□□ -1.29
RNU6-709P-201ENST00000517257 SPHKAPQ2M3C7 1700 aa6.98□□□□□ -1.29
RNU6-709P-201ENST00000517257 ATP10AO60312 1499 aa6.98□□□□□ -1.29
RNU6-709P-201ENST00000517257 RPRD2Q5VT52 1461 aaKnown RBP6.98□□□□□ -1.29
RNU6-709P-201ENST00000517257 REREQ9P2R6 1566 aa6.98□□□□□ -1.29
RNU6-709P-201ENST00000517257 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
RNU6-709P-201ENST00000517257 ARHGEF40Q8TER5 1519 aa6.97□□□□□ -1.29
RNU6-709P-201ENST00000517257 ZC3H13Q5T200 1668 aaKnown RBP6.97□□□□□ -1.29
RNU6-709P-201ENST00000517257 MSH5O43196 834 aa6.97□□□□□ -1.29
RNU6-709P-201ENST00000517257 GGT6Q6P531 493 aa6.97□□□□□ -1.29
RNU6-709P-201ENST00000517257 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.3
RNU6-709P-201ENST00000517257 CAMSAP1Q5T5Y3 1602 aa6.96□□□□□ -1.3
RNU6-709P-201ENST00000517257 KIF1BO60333 1816 aa6.96□□□□□ -1.3
RNU6-709P-201ENST00000517257 EFCAB6Q5THR3 1501 aa6.96□□□□□ -1.3
RNU6-709P-201ENST00000517257 LMTK2Q8IWU2 1503 aa6.96□□□□□ -1.3
RNU6-709P-201ENST00000517257 CCDC144AA2RUR9 1427 aa6.95□□□□□ -1.3
RNU6-709P-201ENST00000517257 AGLP35573 1532 aa6.95□□□□□ -1.3
RNU6-709P-201ENST00000517257 SIGLEC1Q9BZZ2 1709 aa6.94□□□□□ -1.3
RNU6-709P-201ENST00000517257 ABCC3O15438 1527 aa6.94□□□□□ -1.3
RNU6-709P-201ENST00000517257 TRPM2O94759 1503 aa6.94□□□□□ -1.3
RNU6-709P-201ENST00000517257 WASHC2CQ9Y4E1 1318 aa6.94□□□□□ -1.3
RNU6-709P-201ENST00000517257 PLA2R1Q13018 1463 aa6.93□□□□□ -1.3
RNU6-709P-201ENST00000517257 L3MBTL2Q969R5 705 aa6.93□□□□□ -1.3
RNU6-709P-201ENST00000517257 CLTCL1P53675 1640 aa6.93□□□□□ -1.3
RNU6-709P-201ENST00000517257 CLTCQ00610 1675 aaKnown RBP6.93□□□□□ -1.3
RNU6-709P-201ENST00000517257 ZNF316A6NFI3 1004 aaPredicted RBP6.92□□□□□ -1.3
RNU6-709P-201ENST00000517257 PPP6R1Q9UPN7 881 aa6.92□□□□□ -1.3
RNU6-709P-201ENST00000517257 PTPRTO14522 1441 aa6.92□□□□□ -1.3
RNU6-709P-201ENST00000517257 PREX1Q8TCU6 1659 aa6.91□□□□□ -1.3
RNU6-709P-201ENST00000517257 MLECQ14165 292 aa6.9□□□□□ -1.3
RNU6-709P-201ENST00000517257 ESF1Q9H501 851 aaKnown RBP6.9□□□□□ -1.3
RNU6-709P-201ENST00000517257 ARID4BQ4LE39 1312 aaPredicted RBP6.9□□□□□ -1.3
RNU6-709P-201ENST00000517257 NPATQ14207 1427 aa6.9□□□□□ -1.31
RNU6-709P-201ENST00000517257 ARHGAP31Q2M1Z3 1444 aa6.9□□□□□ -1.31
RNU6-709P-201ENST00000517257 RGL3Q3MIN7 710 aa6.89□□□□□ -1.31
RNU6-709P-201ENST00000517257 CNTLNQ9NXG0 1405 aa6.89□□□□□ -1.31
RNU6-709P-201ENST00000517257 NEURL4Q96JN8 1562 aa6.89□□□□□ -1.31
RNU6-709P-201ENST00000517257 MYO5BQ9ULV0 1848 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 FER1L4A9Z1Z3 1794 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 IFT172Q9UG01 1749 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 MROH2AA6NES4 1674 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 UGGT1Q9NYU2 1555 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 NOS1P29475 1434 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 UHRF1BP1Q6BDS2 1440 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 ZNF326Q5BKZ1 582 aaKnown RBP6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 KDM2AQ9Y2K7 1162 aa6.88□□□□□ -1.31
RNU6-709P-201ENST00000517257 PIK3C2BO00750 1634 aa6.87□□□□□ -1.31
RNU6-709P-201ENST00000517257 SYNMO15061 1565 aa6.87□□□□□ -1.31
RNU6-709P-201ENST00000517257 SPATA31E1Q6ZUB1 1445 aa6.87□□□□□ -1.31
RNU6-709P-201ENST00000517257 NBPF8Q3BBV2 869 aa6.87□□□□□ -1.31
RNU6-709P-201ENST00000517257 TRPM1Q7Z4N2 1603 aa6.87□□□□□ -1.31
RNU6-709P-201ENST00000517257 CHGAP10645 457 aaKnown RBP6.86□□□□□ -1.31
RNU6-709P-201ENST00000517257 STAC3Q96MF2 364 aa6.86□□□□□ -1.31
RNU6-709P-201ENST00000517257 PPLO60437 1756 aa6.86□□□□□ -1.31
RNU6-709P-201ENST00000517257 ADGRB3O60242 1522 aa6.86□□□□□ -1.31
RNU6-709P-201ENST00000517257 ERVK-7P63135 1459 aa6.85□□□□□ -1.31
RNU6-709P-201ENST00000517257 RALGAPBQ86X10 1494 aa6.85□□□□□ -1.31
RNU6-709P-201ENST00000517257 PRAG1Q86YV5 1406 aa6.85□□□□□ -1.31
RNU6-709P-201ENST00000517257 SLC52A1Q9NWF4 448 aa6.85□□□□□ -1.31
RNU6-709P-201ENST00000517257 SPATA31D1Q6ZQQ2 1576 aa6.85□□□□□ -1.31
RNU6-709P-201ENST00000517257 POLR1AO95602 1720 aaPredicted RBP6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 KIAA1210Q9ULL0 1709 aa6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 ZMYM3Q14202 1370 aa6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 C3P01024 1663 aa6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 MADDQ8WXG6 1647 aa6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 EIF4G2P78344 907 aaKnown RBP eCLIP6.84□□□□□ -1.31
RNU6-709P-201ENST00000517257 TMEM131LA2VDJ0 1609 aa6.83□□□□□ -1.32
RNU6-709P-201ENST00000517257 LAMC1P11047 1609 aa6.83□□□□□ -1.32
RNU6-709P-201ENST00000517257 FBXO31Q5XUX0 539 aaPredicted RBP6.83□□□□□ -1.32
RNU6-709P-201ENST00000517257 DIEXFQ68CQ4 756 aaKnown RBP6.83□□□□□ -1.32
RNU6-709P-201ENST00000517257 MYOM2P54296 1465 aa6.83□□□□□ -1.32
RNU6-709P-201ENST00000517257 RIMS1Q86UR5 1692 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms