RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
SCARNA20.5-201ENST00000516991 KIF3BO15066 747 aa23.18■■□□□ 1.3
SCARNA20.5-201ENST00000516991 PZPP20742 1482 aa23.17■■□□□ 1.3
SCARNA20.5-201ENST00000516991 MAST1Q9Y2H9 1570 aa23.16■■□□□ 1.3
SCARNA20.5-201ENST00000516991 TSPY4P0CV99 314 aa23.16■■□□□ 1.3
SCARNA20.5-201ENST00000516991 TSPY10P0CW01 314 aa23.16■■□□□ 1.3
SCARNA20.5-201ENST00000516991 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
SCARNA20.5-201ENST00000516991 DNMT1P26358 1616 aaKnown RBP23.14■■□□□ 1.29
SCARNA20.5-201ENST00000516991 TNRQ92752 1358 aa23.14■■□□□ 1.29
SCARNA20.5-201ENST00000516991 MIA2Q96PC5 1412 aa23.12■■□□□ 1.29
SCARNA20.5-201ENST00000516991 RNF17Q9BXT8 1623 aaKnown RBP23.11■■□□□ 1.29
SCARNA20.5-201ENST00000516991 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
SCARNA20.5-201ENST00000516991 WASHC2CQ9Y4E1 1318 aa23.1■■□□□ 1.29
SCARNA20.5-201ENST00000516991 MYOM3Q5VTT5 1437 aa23.1■■□□□ 1.29
SCARNA20.5-201ENST00000516991 EIF2AK4Q9P2K8 1649 aaKnown RBP23.1■■□□□ 1.29
SCARNA20.5-201ENST00000516991 ZC3H13Q5T200 1668 aaKnown RBP23.09■■□□□ 1.29
SCARNA20.5-201ENST00000516991 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
SCARNA20.5-201ENST00000516991 NLRP1Q9C000 1473 aa23.07■■□□□ 1.28
SCARNA20.5-201ENST00000516991 ZNF335Q9H4Z2 1342 aaPredicted RBP23.07■■□□□ 1.28
SCARNA20.5-201ENST00000516991 KANK4Q5T7N3 995 aaPredicted RBP23.04■■□□□ 1.28
SCARNA20.5-201ENST00000516991 FBXO31Q5XUX0 539 aaPredicted RBP23.04■■□□□ 1.28
SCARNA20.5-201ENST00000516991 ABCC3O15438 1527 aa23.03■■□□□ 1.28
SCARNA20.5-201ENST00000516991 NEURL4Q96JN8 1562 aa23.02■■□□□ 1.28
SCARNA20.5-201ENST00000516991 DUOX2Q9NRD8 1548 aa23.01■■□□□ 1.27
SCARNA20.5-201ENST00000516991 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
SCARNA20.5-201ENST00000516991 UGGT1Q9NYU2 1555 aa23■■□□□ 1.27
SCARNA20.5-201ENST00000516991 CROCC2H7BZ55 1655 aa23■■□□□ 1.27
SCARNA20.5-201ENST00000516991 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
SCARNA20.5-201ENST00000516991 MROH1Q8NDA8 1641 aa22.99■■□□□ 1.27
SCARNA20.5-201ENST00000516991 DEPDC5O75140 1603 aa22.97■■□□□ 1.27
SCARNA20.5-201ENST00000516991 THEMISQ8N1K5 641 aaPredicted RBP22.97■■□□□ 1.27
SCARNA20.5-201ENST00000516991 APLP2Q06481 763 aa22.96■■□□□ 1.27
SCARNA20.5-201ENST00000516991 CPS1P31327 1500 aa22.96■■□□□ 1.27
SCARNA20.5-201ENST00000516991 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
SCARNA20.5-201ENST00000516991 ERVK-7P63135 1459 aa22.95■■□□□ 1.26
SCARNA20.5-201ENST00000516991 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
SCARNA20.5-201ENST00000516991 DISP3Q9P2K9 1392 aa22.95■■□□□ 1.26
SCARNA20.5-201ENST00000516991 CEP152O94986 1710 aa22.94■■□□□ 1.26
SCARNA20.5-201ENST00000516991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.94■■□□□ 1.26
SCARNA20.5-201ENST00000516991 PRDM15P57071 1507 aaPredicted RBP22.93■■□□□ 1.26
SCARNA20.5-201ENST00000516991 MED14O60244 1454 aa22.93■■□□□ 1.26
SCARNA20.5-201ENST00000516991 ERBINQ96RT1 1412 aa22.93■■□□□ 1.26
SCARNA20.5-201ENST00000516991 UBAP1LF5GYI3 381 aa22.93■■□□□ 1.26
SCARNA20.5-201ENST00000516991 KIF15Q9NS87 1388 aa22.92■■□□□ 1.26
SCARNA20.5-201ENST00000516991 ABCC5O15440 1437 aa22.91■■□□□ 1.26
SCARNA20.5-201ENST00000516991 NPHP4O75161 1426 aaPredicted RBP22.91■■□□□ 1.26
SCARNA20.5-201ENST00000516991 IQGAP1P46940 1657 aa22.89■■□□□ 1.25
SCARNA20.5-201ENST00000516991 FGD6Q6ZV73 1430 aa22.89■■□□□ 1.25
SCARNA20.5-201ENST00000516991 DAPK1P53355 1430 aa22.88■■□□□ 1.25
SCARNA20.5-201ENST00000516991 VWDEQ8N2E2 1590 aa22.88■■□□□ 1.25
SCARNA20.5-201ENST00000516991 ARHGAP31Q2M1Z3 1444 aa22.87■■□□□ 1.25
SCARNA20.5-201ENST00000516991 UBR1Q8IWV7 1749 aa22.85■■□□□ 1.25
SCARNA20.5-201ENST00000516991 CFAP65Q6ZU64 1925 aaKnown RBP22.83■■□□□ 1.25
SCARNA20.5-201ENST00000516991 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
SCARNA20.5-201ENST00000516991 KANK1Q14678 1352 aa22.81■■□□□ 1.24
SCARNA20.5-201ENST00000516991 ANKRD30AQ9BXX3 1397 aa22.81■■□□□ 1.24
SCARNA20.5-201ENST00000516991 TOM1O60784 492 aa22.8■■□□□ 1.24
SCARNA20.5-201ENST00000516991 SYNMO15061 1565 aa22.8■■□□□ 1.24
SCARNA20.5-201ENST00000516991 SCAF11Q99590 1463 aaKnown RBP22.79■■□□□ 1.24
SCARNA20.5-201ENST00000516991 SLIT1O75093 1534 aa22.77■■□□□ 1.24
SCARNA20.5-201ENST00000516991 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
SCARNA20.5-201ENST00000516991 ARHGAP23Q9P227 1491 aa22.77■■□□□ 1.24
SCARNA20.5-201ENST00000516991 ADGRL2O95490 1459 aa22.75■■□□□ 1.23
SCARNA20.5-201ENST00000516991 ILDR2Q71H61 639 aa22.75■■□□□ 1.23
SCARNA20.5-201ENST00000516991 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
SCARNA20.5-201ENST00000516991 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.74■■□□□ 1.23
SCARNA20.5-201ENST00000516991 SCAF1Q9H7N4 1312 aaKnown RBP22.74■■□□□ 1.23
SCARNA20.5-201ENST00000516991 PIK3C2BO00750 1634 aa22.73■■□□□ 1.23
SCARNA20.5-201ENST00000516991 STRCP1A6NGW2 1772 aa22.72■■□□□ 1.23
SCARNA20.5-201ENST00000516991 PIP4K2BP78356 416 aa22.71■■□□□ 1.23
SCARNA20.5-201ENST00000516991 EFCAB6Q5THR3 1501 aa22.71■■□□□ 1.23
SCARNA20.5-201ENST00000516991 SOCS7O14512 581 aa22.7■■□□□ 1.22
SCARNA20.5-201ENST00000516991 CHIC2Q9UKJ5 165 aa22.7■■□□□ 1.22
SCARNA20.5-201ENST00000516991 LRRC7Q96NW7 1537 aa22.7■■□□□ 1.22
SCARNA20.5-201ENST00000516991 EID1Q9Y6B2 187 aa22.69■■□□□ 1.22
SCARNA20.5-201ENST00000516991 TXNDC2Q86VQ3 553 aa22.68■■□□□ 1.22
SCARNA20.5-201ENST00000516991 ALKQ9UM73 1620 aa22.68■■□□□ 1.22
SCARNA20.5-201ENST00000516991 HSPA1LP34931 641 aa22.67■■□□□ 1.22
SCARNA20.5-201ENST00000516991 TMEM2Q9UHN6 1383 aa22.66■■□□□ 1.22
SCARNA20.5-201ENST00000516991 LTKP29376 864 aa22.65■■□□□ 1.22
SCARNA20.5-201ENST00000516991 STAG3Q9UJ98 1225 aa22.65■■□□□ 1.22
SCARNA20.5-201ENST00000516991 NOS1P29475 1434 aa22.65■■□□□ 1.22
SCARNA20.5-201ENST00000516991 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
SCARNA20.5-201ENST00000516991 ADGRB3O60242 1522 aa22.63■■□□□ 1.21
SCARNA20.5-201ENST00000516991 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
SCARNA20.5-201ENST00000516991 ANKRD50Q9ULJ7 1429 aa22.63■■□□□ 1.21
SCARNA20.5-201ENST00000516991 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
SCARNA20.5-201ENST00000516991 TET3O43151 1660 aa22.59■■□□□ 1.21
SCARNA20.5-201ENST00000516991 IDI1Q13907 227 aa22.59■■□□□ 1.21
SCARNA20.5-201ENST00000516991 SLC52A1Q9NWF4 448 aa22.57■■□□□ 1.2
SCARNA20.5-201ENST00000516991 UNC13BO14795 1591 aa22.56■■□□□ 1.2
SCARNA20.5-201ENST00000516991 XIRP1Q702N8 1843 aaKnown RBP22.56■■□□□ 1.2
SCARNA20.5-201ENST00000516991 GCC2Q8IWJ2 1684 aa22.55■■□□□ 1.2
SCARNA20.5-201ENST00000516991 ROCK1Q13464 1354 aa22.52■■□□□ 1.2
SCARNA20.5-201ENST00000516991 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
SCARNA20.5-201ENST00000516991 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
SCARNA20.5-201ENST00000516991 KCNA6P17658 529 aa22.49■■□□□ 1.19
SCARNA20.5-201ENST00000516991 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
SCARNA20.5-201ENST00000516991 TMEM94Q12767 1356 aa22.47■■□□□ 1.19
SCARNA20.5-201ENST00000516991 ZFYVE9O95405 1425 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms