RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 ZNF518AQ6AHZ1 1483 aa4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 ARID3CA6NKF2 412 aa4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 ZNF772Q68DY9 489 aaPredicted RBP4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 NPHP4O75161 1426 aaPredicted RBP4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 PLXNC1O60486 1568 aa4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 JCADQ9P266 1359 aa4.52□□□□□ -1.69
RNU1-48P-201ENST00000516400 ABCC1P33527 1531 aa4.51□□□□□ -1.69
RNU1-48P-201ENST00000516400 ADGBQ8N7X0 1667 aa4.51□□□□□ -1.69
RNU1-48P-201ENST00000516400 BRWD3Q6RI45 1802 aa4.51□□□□□ -1.69
RNU1-48P-201ENST00000516400 FGD6Q6ZV73 1430 aa4.5□□□□□ -1.69
RNU1-48P-201ENST00000516400 CHD4Q14839 1912 aa4.5□□□□□ -1.69
RNU1-48P-201ENST00000516400 YY1P25490 414 aa4.49□□□□□ -1.69
RNU1-48P-201ENST00000516400 KDM5DQ9BY66 1539 aa4.49□□□□□ -1.69
RNU1-48P-201ENST00000516400 SCAF11Q99590 1463 aaKnown RBP4.49□□□□□ -1.69
RNU1-48P-201ENST00000516400 NWD1Q149M9 1564 aa4.48□□□□□ -1.69
RNU1-48P-201ENST00000516400 SPATA31A6Q5VVP1 1343 aa4.48□□□□□ -1.69
RNU1-48P-201ENST00000516400 CAMTA1Q9Y6Y1 1673 aa4.48□□□□□ -1.69
RNU1-48P-201ENST00000516400 AHDC1Q5TGY3 1603 aaPredicted RBP4.48□□□□□ -1.69
RNU1-48P-201ENST00000516400 HRCP23327 699 aa4.48□□□□□ -1.69
RNU1-48P-201ENST00000516400 ATP7AQ04656 1500 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 KIF14Q15058 1648 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 UBR1Q8IWV7 1749 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 RBM6P78332 1123 aaKnown RBP4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 ANKLE2Q86XL3 938 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 CCDC125Q86Z20 511 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 TET3O43151 1660 aa4.47□□□□□ -1.69
RNU1-48P-201ENST00000516400 C1QTNF8P60827 252 aa4.46□□□□□ -1.7
RNU1-48P-201ENST00000516400 FBXO31Q5XUX0 539 aaPredicted RBP4.46□□□□□ -1.7
RNU1-48P-201ENST00000516400 CHD2O14647 1828 aaKnown RBP4.46□□□□□ -1.7
RNU1-48P-201ENST00000516400 LRRIQ1Q96JM4 1722 aa4.46□□□□□ -1.7
RNU1-48P-201ENST00000516400 TIAM1Q13009 1591 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 SAMD9LQ8IVG5 1584 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 UGGT1Q9NYU2 1555 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 ARHGAP23Q9P227 1491 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 ATAD2Q6PL18 1390 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 PLEKHD1A6NEE1 506 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 EFCAB2Q5VUJ9 269 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 ZNF784Q8NCA9 323 aaPredicted RBP4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 QTRT2Q9H974 415 aaKnown RBP4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 AFF2P51816 1311 aa4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 KDM5AP29375 1690 aaKnown RBP4.45□□□□□ -1.7
RNU1-48P-201ENST00000516400 LRRC9Q6ZRR7 1453 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 SPHKAPQ2M3C7 1700 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 TMEM94Q12767 1356 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 SENP3-EIF4A1A0A087X0R7 540 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 LTKP29376 864 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 PCDH10Q9P2E7 1040 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 MAST1Q9Y2H9 1570 aa4.44□□□□□ -1.7
RNU1-48P-201ENST00000516400 CDC42BPAQ5VT25 1732 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 PZPP20742 1482 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 NCOA2Q15596 1464 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 SLIT1O75093 1534 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 PRDM15P57071 1507 aaPredicted RBP4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 CFAP65Q6ZU64 1925 aaKnown RBP4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 DEFB132Q7Z7B7 95 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 THEMISQ8N1K5 641 aaPredicted RBP4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 SLAIN2Q9P270 581 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 MIA2Q96PC5 1412 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 INO80Q9ULG1 1556 aaPredicted RBP4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 PRXQ9BXM0 1461 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 NLRP1Q9C000 1473 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 PREX2Q70Z35 1606 aa4.43□□□□□ -1.7
RNU1-48P-201ENST00000516400 NUTM2BA6NNL0 878 aaPredicted RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 NUTM2EB1AL46 878 aaPredicted RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 RTEL1-TNFRSF6BF6WH68 1400 aa4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 NUTM2DQ5VT03 806 aaPredicted RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 NUTM2AQ8IVF1 878 aaPredicted RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 P3H3Q8IVL6 736 aa4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 ESF1Q9H501 851 aaKnown RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 MARF1Q9Y4F3 1742 aaKnown RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 TNRC18O15417 2968 aaPredicted RBP4.42□□□□□ -1.7
RNU1-48P-201ENST00000516400 ABCC3O15438 1527 aa4.41□□□□□ -1.7
RNU1-48P-201ENST00000516400 TNRQ92752 1358 aa4.41□□□□□ -1.7
RNU1-48P-201ENST00000516400 ATRNO75882 1429 aa4.41□□□□□ -1.7
RNU1-48P-201ENST00000516400 BLMP54132 1417 aaPredicted RBP4.41□□□□□ -1.7
RNU1-48P-201ENST00000516400 SETD5Q9C0A6 1442 aa4.41□□□□□ -1.7
RNU1-48P-201ENST00000516400 UNC13BO14795 1591 aa4.4□□□□□ -1.7
RNU1-48P-201ENST00000516400 LAMC1P11047 1609 aa4.4□□□□□ -1.7
RNU1-48P-201ENST00000516400 FAM135AQ9P2D6 1515 aa4.4□□□□□ -1.71
RNU1-48P-201ENST00000516400 GLI3P10071 1580 aa4.4□□□□□ -1.71
RNU1-48P-201ENST00000516400 A2MP01023 1474 aa4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 CAMSAP2Q08AD1 1489 aa4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 PSDA5PKW4 1024 aaPredicted RBP4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 KCNA6P17658 529 aa4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 FNBP4Q8N3X1 1017 aaPredicted RBP4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 ARHGAP5Q13017 1502 aa4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 MROH1Q8NDA8 1641 aa4.39□□□□□ -1.71
RNU1-48P-201ENST00000516400 TNS1Q9HBL0 1735 aaKnown RBP4.38□□□□□ -1.71
RNU1-48P-201ENST00000516400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.38□□□□□ -1.71
RNU1-48P-201ENST00000516400 HNRNPUL2Q1KMD3 747 aaKnown RBP4.38□□□□□ -1.71
RNU1-48P-201ENST00000516400 SHANK3Q9BYB0 1731 aa4.38□□□□□ -1.71
RNU1-48P-201ENST00000516400 NKTRP30414 1462 aaKnown RBP4.37□□□□□ -1.71
RNU1-48P-201ENST00000516400 COL22A1Q8NFW1 1626 aaPredicted RBP4.37□□□□□ -1.71
RNU1-48P-201ENST00000516400 NGLY1Q96IV0 654 aa4.37□□□□□ -1.71
RNU1-48P-201ENST00000516400 RREB1Q92766 1687 aa4.37□□□□□ -1.71
RNU1-48P-201ENST00000516400 GPATCH8Q9UKJ3 1502 aaKnown RBP4.36□□□□□ -1.71
RNU1-48P-201ENST00000516400 MEX3CQ5U5Q3 659 aaKnown RBP4.36□□□□□ -1.71
RNU1-48P-201ENST00000516400 GGT6Q6P531 493 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms