RNA–Protein interactions for RNA: ENST00000516227.1

RN7SKP288-201, Transcript of RNA, 7SK small nuclear pseudogene 288, humanhuman

BASIC

Gene RN7SKP288, Length 268 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP288-201ENST00000516227 PKD2Q13563 968 aa8.55□□□□□ -1.04
RN7SKP288-201ENST00000516227 RTEL1-TNFRSF6BF6WH68 1400 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 ABCA6Q8N139 1617 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 ZNF518AQ6AHZ1 1483 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 PPP1R15AO75807 674 aaPredicted RBP8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 MYO5BQ9ULV0 1848 aa8.54□□□□□ -1.04
RN7SKP288-201ENST00000516227 KDM5CP41229 1560 aa8.53□□□□□ -1.04
RN7SKP288-201ENST00000516227 RPRD2Q5VT52 1461 aaKnown RBP8.53□□□□□ -1.04
RN7SKP288-201ENST00000516227 ANKRD30BQ9BXX2 1392 aa8.53□□□□□ -1.04
RN7SKP288-201ENST00000516227 NEO1Q92859 1461 aa8.52□□□□□ -1.05
RN7SKP288-201ENST00000516227 BCORL1Q5H9F3 1711 aa8.52□□□□□ -1.05
RN7SKP288-201ENST00000516227 RNF17Q9BXT8 1623 aaKnown RBP8.52□□□□□ -1.05
RN7SKP288-201ENST00000516227 MAGI2Q86UL8 1455 aa8.51□□□□□ -1.05
RN7SKP288-201ENST00000516227 CAMSAP1Q5T5Y3 1602 aa8.5□□□□□ -1.05
RN7SKP288-201ENST00000516227 KANK1Q14678 1352 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 DIP2CQ9Y2E4 1556 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 MROH1Q8NDA8 1641 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 TEX14Q8IWB6 1497 aa8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 ZC3H13Q5T200 1668 aaKnown RBP8.49□□□□□ -1.05
RN7SKP288-201ENST00000516227 FRMPD1Q5SYB0 1578 aa8.48□□□□□ -1.05
RN7SKP288-201ENST00000516227 TRPM1Q7Z4N2 1603 aa8.48□□□□□ -1.05
RN7SKP288-201ENST00000516227 L3MBTL2Q969R5 705 aa8.48□□□□□ -1.05
RN7SKP288-201ENST00000516227 IFT172Q9UG01 1749 aa8.48□□□□□ -1.05
RN7SKP288-201ENST00000516227 PRDM15P57071 1507 aaPredicted RBP8.48□□□□□ -1.05
RN7SKP288-201ENST00000516227 CLTCL1P53675 1640 aa8.47□□□□□ -1.05
RN7SKP288-201ENST00000516227 MROH2AA6NES4 1674 aa8.47□□□□□ -1.05
RN7SKP288-201ENST00000516227 A2MP01023 1474 aa8.47□□□□□ -1.05
RN7SKP288-201ENST00000516227 KIF3BO15066 747 aa8.47□□□□□ -1.05
RN7SKP288-201ENST00000516227 DHX29Q7Z478 1369 aaKnown RBP8.47□□□□□ -1.05
RN7SKP288-201ENST00000516227 MLH3Q9UHC1 1453 aa8.46□□□□□ -1.05
RN7SKP288-201ENST00000516227 HIRIP3Q9BW71 556 aaPredicted RBP8.46□□□□□ -1.06
RN7SKP288-201ENST00000516227 VWDEQ8N2E2 1590 aa8.46□□□□□ -1.06
RN7SKP288-201ENST00000516227 CLTCQ00610 1675 aaKnown RBP8.46□□□□□ -1.06
RN7SKP288-201ENST00000516227 SIGLEC1Q9BZZ2 1709 aa8.46□□□□□ -1.06
RN7SKP288-201ENST00000516227 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.06
RN7SKP288-201ENST00000516227 PPLO60437 1756 aa8.45□□□□□ -1.06
RN7SKP288-201ENST00000516227 RAPGEF3O95398 923 aa8.45□□□□□ -1.06
RN7SKP288-201ENST00000516227 ZNF326Q5BKZ1 582 aaKnown RBP8.45□□□□□ -1.06
RN7SKP288-201ENST00000516227 PREX1Q8TCU6 1659 aa8.44□□□□□ -1.06
RN7SKP288-201ENST00000516227 EFCAB6Q5THR3 1501 aa8.44□□□□□ -1.06
RN7SKP288-201ENST00000516227 ZMYM4Q5VZL5 1548 aa8.44□□□□□ -1.06
RN7SKP288-201ENST00000516227 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
RN7SKP288-201ENST00000516227 TRPM2O94759 1503 aa8.43□□□□□ -1.06
RN7SKP288-201ENST00000516227 KIAA1210Q9ULL0 1709 aa8.42□□□□□ -1.06
RN7SKP288-201ENST00000516227 ATP10AO60312 1499 aa8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 NBPF8Q3BBV2 869 aa8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 RGL3Q3MIN7 710 aa8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 GGT6Q6P531 493 aa8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 DCAF11Q8TEB1 546 aa8.41□□□□□ -1.06
RN7SKP288-201ENST00000516227 LAMC1P11047 1609 aa8.4□□□□□ -1.06
RN7SKP288-201ENST00000516227 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.06
RN7SKP288-201ENST00000516227 MIER1Q8N108 512 aa8.4□□□□□ -1.06
RN7SKP288-201ENST00000516227 IQGAP1P46940 1657 aa8.4□□□□□ -1.07
RN7SKP288-201ENST00000516227 MADDQ8WXG6 1647 aa8.4□□□□□ -1.07
RN7SKP288-201ENST00000516227 PLA2R1Q13018 1463 aa8.39□□□□□ -1.07
RN7SKP288-201ENST00000516227 YEATS2Q9ULM3 1422 aa8.39□□□□□ -1.07
RN7SKP288-201ENST00000516227 DDX10Q13206 875 aaKnown RBP8.39□□□□□ -1.07
RN7SKP288-201ENST00000516227 ABCC3O15438 1527 aa8.39□□□□□ -1.07
RN7SKP288-201ENST00000516227 LMTK2Q8IWU2 1503 aa8.39□□□□□ -1.07
RN7SKP288-201ENST00000516227 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
RN7SKP288-201ENST00000516227 UGGT1Q9NYU2 1555 aa8.38□□□□□ -1.07
RN7SKP288-201ENST00000516227 REREQ9P2R6 1566 aa8.38□□□□□ -1.07
RN7SKP288-201ENST00000516227 ARHGEF40Q8TER5 1519 aa8.38□□□□□ -1.07
RN7SKP288-201ENST00000516227 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
RN7SKP288-201ENST00000516227 UHRF1BP1Q6BDS2 1440 aa8.37□□□□□ -1.07
RN7SKP288-201ENST00000516227 PIK3C2BO00750 1634 aa8.36□□□□□ -1.07
RN7SKP288-201ENST00000516227 WASHC2CQ9Y4E1 1318 aa8.36□□□□□ -1.07
RN7SKP288-201ENST00000516227 PTPRTO14522 1441 aa8.36□□□□□ -1.07
RN7SKP288-201ENST00000516227 NEURL4Q96JN8 1562 aa8.35□□□□□ -1.07
RN7SKP288-201ENST00000516227 SYNMO15061 1565 aa8.35□□□□□ -1.07
RN7SKP288-201ENST00000516227 ROCK2O75116 1388 aaKnown RBP8.35□□□□□ -1.07
RN7SKP288-201ENST00000516227 CHGAP10645 457 aaKnown RBP8.34□□□□□ -1.07
RN7SKP288-201ENST00000516227 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
RN7SKP288-201ENST00000516227 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
RN7SKP288-201ENST00000516227 PRAG1Q86YV5 1406 aa8.34□□□□□ -1.07
RN7SKP288-201ENST00000516227 USP47Q96K76 1375 aa8.34□□□□□ -1.07
RN7SKP288-201ENST00000516227 SPATA31E1Q6ZUB1 1445 aa8.33□□□□□ -1.08
RN7SKP288-201ENST00000516227 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
RN7SKP288-201ENST00000516227 KDM5AP29375 1690 aaKnown RBP8.33□□□□□ -1.08
RN7SKP288-201ENST00000516227 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
RN7SKP288-201ENST00000516227 AGLP35573 1532 aa8.33□□□□□ -1.08
RN7SKP288-201ENST00000516227 NPATQ14207 1427 aa8.32□□□□□ -1.08
RN7SKP288-201ENST00000516227 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
RN7SKP288-201ENST00000516227 ADGRB3O60242 1522 aa8.32□□□□□ -1.08
RN7SKP288-201ENST00000516227 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
RN7SKP288-201ENST00000516227 ANP32CO43423 234 aa8.31□□□□□ -1.08
RN7SKP288-201ENST00000516227 TMEM131LA2VDJ0 1609 aa8.31□□□□□ -1.08
RN7SKP288-201ENST00000516227 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
RN7SKP288-201ENST00000516227 COL17A1Q9UMD9 1497 aaPredicted RBP8.31□□□□□ -1.08
RN7SKP288-201ENST00000516227 C3P01024 1663 aa8.3□□□□□ -1.08
RN7SKP288-201ENST00000516227 ARHGEF28Q8N1W1 1705 aaKnown RBP8.3□□□□□ -1.08
RN7SKP288-201ENST00000516227 MLECQ14165 292 aa8.3□□□□□ -1.08
RN7SKP288-201ENST00000516227 ESF1Q9H501 851 aaKnown RBP8.3□□□□□ -1.08
RN7SKP288-201ENST00000516227 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
RN7SKP288-201ENST00000516227 CENPBP07199 599 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms