RNA–Protein interactions for RNA: ENST00000516219.1

RN7SKP52-201, Transcript of RNA, 7SK small nuclear pseudogene 52, humanhuman

BASIC

Gene RN7SKP52, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP52-201ENST00000516219 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
RN7SKP52-201ENST00000516219 TROQ12816 1431 aaPredicted RBP15.41■□□□□ 0.06
RN7SKP52-201ENST00000516219 AFAP1Q8N556 730 aa15.4■□□□□ 0.06
RN7SKP52-201ENST00000516219 MROH2AA6NES4 1674 aa15.4■□□□□ 0.06
RN7SKP52-201ENST00000516219 POTEGQ6S5H5 508 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 FMN1Q68DA7 1419 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
RN7SKP52-201ENST00000516219 CLTCQ00610 1675 aaKnown RBP15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 AGLP35573 1532 aa15.38■□□□□ 0.05
RN7SKP52-201ENST00000516219 EFCAB2Q5VUJ9 269 aa15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 MLH3Q9UHC1 1453 aa15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
RN7SKP52-201ENST00000516219 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
RN7SKP52-201ENST00000516219 MYO3AQ8NEV4 1616 aa15.36■□□□□ 0.05
RN7SKP52-201ENST00000516219 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
RN7SKP52-201ENST00000516219 CAMSAP1Q5T5Y3 1602 aa15.35■□□□□ 0.05
RN7SKP52-201ENST00000516219 PTPRTO14522 1441 aa15.34■□□□□ 0.05
RN7SKP52-201ENST00000516219 NCOA1Q15788 1441 aa15.34■□□□□ 0.05
RN7SKP52-201ENST00000516219 OTUD5Q96G74 571 aa15.33■□□□□ 0.04
RN7SKP52-201ENST00000516219 CLIP1P30622 1438 aa15.32■□□□□ 0.04
RN7SKP52-201ENST00000516219 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
RN7SKP52-201ENST00000516219 INO80Q9ULG1 1556 aaPredicted RBP15.31■□□□□ 0.04
RN7SKP52-201ENST00000516219 SOCS7O14512 581 aa15.3■□□□□ 0.04
RN7SKP52-201ENST00000516219 PLXNC1O60486 1568 aa15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 MYT1LQ9UL68 1186 aa15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
RN7SKP52-201ENST00000516219 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
RN7SKP52-201ENST00000516219 IQSEC2Q5JU85 1478 aa15.27■□□□□ 0.04
RN7SKP52-201ENST00000516219 POLR1AO95602 1720 aaPredicted RBP15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 CEP170BQ9Y4F5 1589 aaPredicted RBP15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 CCDC18Q5T9S5 1454 aa15.26■□□□□ 0.03
RN7SKP52-201ENST00000516219 ADGBQ8N7X0 1667 aa15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CASKIN1Q8WXD9 1431 aa15.25■□□□□ 0.03
RN7SKP52-201ENST00000516219 CNTLNQ9NXG0 1405 aa15.23■□□□□ 0.03
RN7SKP52-201ENST00000516219 NPATQ14207 1427 aa15.22■□□□□ 0.03
RN7SKP52-201ENST00000516219 ZNF335Q9H4Z2 1342 aaPredicted RBP15.21■□□□□ 0.03
RN7SKP52-201ENST00000516219 ATXN8OSP0DMR3 200 aa15.21■□□□□ 0.03
RN7SKP52-201ENST00000516219 FYCO1Q9BQS8 1478 aa15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 NCKAP5LQ9HCH0 1330 aa15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 GPATCH8Q9UKJ3 1502 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 TCOF1Q13428 1488 aaKnown RBP15.2■□□□□ 0.02
RN7SKP52-201ENST00000516219 NEURL4Q96JN8 1562 aa15.19■□□□□ 0.02
RN7SKP52-201ENST00000516219 DNMT1P26358 1616 aaKnown RBP15.19■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZMYM3Q14202 1370 aa15.18■□□□□ 0.02
RN7SKP52-201ENST00000516219 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 TIAM1Q13009 1591 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 PLA2R1Q13018 1463 aa15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
RN7SKP52-201ENST00000516219 A2MP01023 1474 aa15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZNF579Q8NAF0 562 aaKnown RBP15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
RN7SKP52-201ENST00000516219 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
RN7SKP52-201ENST00000516219 HNRNPMP52272 730 aaKnown RBP eCLIP15.15■□□□□ 0.02
RN7SKP52-201ENST00000516219 STRCP1A6NGW2 1772 aa15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
RN7SKP52-201ENST00000516219 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
RN7SKP52-201ENST00000516219 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
RN7SKP52-201ENST00000516219 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
RN7SKP52-201ENST00000516219 UBAP1LF5GYI3 381 aa15.1■□□□□ 0.01
RN7SKP52-201ENST00000516219 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
RN7SKP52-201ENST00000516219 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
RN7SKP52-201ENST00000516219 VWDEQ8N2E2 1590 aa15.08■□□□□ 0
RN7SKP52-201ENST00000516219 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
RN7SKP52-201ENST00000516219 MBD5Q9P267 1494 aa15.07■□□□□ 0
RN7SKP52-201ENST00000516219 GGT6Q6P531 493 aa15.06■□□□□ 0
RN7SKP52-201ENST00000516219 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
RN7SKP52-201ENST00000516219 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
RN7SKP52-201ENST00000516219 XIRP1Q702N8 1843 aaKnown RBP15.04■□□□□ -0
RN7SKP52-201ENST00000516219 IQGAP1P46940 1657 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 EHBP1L1Q8N3D4 1523 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 KDM5DQ9BY66 1539 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
RN7SKP52-201ENST00000516219 PKD2Q13563 968 aa15.04■□□□□ -0
RN7SKP52-201ENST00000516219 CEP152O94986 1710 aa15.03■□□□□ -0
RN7SKP52-201ENST00000516219 ZC3H13Q5T200 1668 aaKnown RBP15.03■□□□□ -0
RN7SKP52-201ENST00000516219 CPS1P31327 1500 aa15.02■□□□□ -0
RN7SKP52-201ENST00000516219 HSPA1LP34931 641 aa15.02■□□□□ -0
RN7SKP52-201ENST00000516219 CFDP1Q9UEE9 299 aaPredicted RBP15.02■□□□□ -0
RN7SKP52-201ENST00000516219 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
RN7SKP52-201ENST00000516219 PZPP20742 1482 aa15.01□□□□□ -0.01
RN7SKP52-201ENST00000516219 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
RN7SKP52-201ENST00000516219 FBXO31Q5XUX0 539 aaPredicted RBP15□□□□□ -0.01
RN7SKP52-201ENST00000516219 PIP4K2BP78356 416 aa14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 RNF17Q9BXT8 1623 aaKnown RBP14.99□□□□□ -0.01
RN7SKP52-201ENST00000516219 MTUS2Q5JR59 1369 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 TNRQ92752 1358 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 MROH1Q8NDA8 1641 aa14.98□□□□□ -0.01
RN7SKP52-201ENST00000516219 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 SYNMO15061 1565 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 UGGT1Q9NYU2 1555 aa14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
RN7SKP52-201ENST00000516219 FAM135AQ9P2D6 1515 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms