RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 CHIC2Q9UKJ5 165 aa17.21■□□□□ 0.35
SCARNA16.1-201ENST00000516133 DNMT1P26358 1616 aaKnown RBP17.2■□□□□ 0.34
SCARNA16.1-201ENST00000516133 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
SCARNA16.1-201ENST00000516133 FAM135AQ9P2D6 1515 aa17.18■□□□□ 0.34
SCARNA16.1-201ENST00000516133 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
SCARNA16.1-201ENST00000516133 PREX1Q8TCU6 1659 aa17.18■□□□□ 0.34
SCARNA16.1-201ENST00000516133 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
SCARNA16.1-201ENST00000516133 PTPRKQ15262 1439 aa17.16■□□□□ 0.34
SCARNA16.1-201ENST00000516133 CROCC2H7BZ55 1655 aa17.16■□□□□ 0.34
SCARNA16.1-201ENST00000516133 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
SCARNA16.1-201ENST00000516133 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
SCARNA16.1-201ENST00000516133 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
SCARNA16.1-201ENST00000516133 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
SCARNA16.1-201ENST00000516133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
SCARNA16.1-201ENST00000516133 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
SCARNA16.1-201ENST00000516133 FBXO31Q5XUX0 539 aaPredicted RBP17.12■□□□□ 0.33
SCARNA16.1-201ENST00000516133 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SCARNA16.1-201ENST00000516133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.11■□□□□ 0.33
SCARNA16.1-201ENST00000516133 PZPP20742 1482 aa17.11■□□□□ 0.33
SCARNA16.1-201ENST00000516133 KANK1Q14678 1352 aa17.1■□□□□ 0.33
SCARNA16.1-201ENST00000516133 ABCC3O15438 1527 aa17.08■□□□□ 0.32
SCARNA16.1-201ENST00000516133 TNRQ92752 1358 aa17.08■□□□□ 0.32
SCARNA16.1-201ENST00000516133 ITGAEP38570 1179 aa17.08■□□□□ 0.32
SCARNA16.1-201ENST00000516133 ROCK1Q13464 1354 aa17.07■□□□□ 0.32
SCARNA16.1-201ENST00000516133 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
SCARNA16.1-201ENST00000516133 ZC3H13Q5T200 1668 aaKnown RBP17.05■□□□□ 0.32
SCARNA16.1-201ENST00000516133 MROH1Q8NDA8 1641 aa17.05■□□□□ 0.32
SCARNA16.1-201ENST00000516133 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
SCARNA16.1-201ENST00000516133 PKD2Q13563 968 aa17.03■□□□□ 0.32
SCARNA16.1-201ENST00000516133 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
SCARNA16.1-201ENST00000516133 A2ML1A8K2U0 1454 aa17.03■□□□□ 0.32
SCARNA16.1-201ENST00000516133 ARHGAP31Q2M1Z3 1444 aa17.03■□□□□ 0.32
SCARNA16.1-201ENST00000516133 RRBP1Q9P2E9 1410 aaKnown RBP17.03■□□□□ 0.32
SCARNA16.1-201ENST00000516133 MYO3AQ8NEV4 1616 aa17.02■□□□□ 0.31
SCARNA16.1-201ENST00000516133 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.31
SCARNA16.1-201ENST00000516133 NLRP1Q9C000 1473 aa17.01■□□□□ 0.31
SCARNA16.1-201ENST00000516133 DEPDC5O75140 1603 aa17.01■□□□□ 0.31
SCARNA16.1-201ENST00000516133 CAMSAP1Q5T5Y3 1602 aa17■□□□□ 0.31
SCARNA16.1-201ENST00000516133 STRCQ7RTU9 1775 aa17■□□□□ 0.31
SCARNA16.1-201ENST00000516133 PTPRTO14522 1441 aa17■□□□□ 0.31
SCARNA16.1-201ENST00000516133 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
SCARNA16.1-201ENST00000516133 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
SCARNA16.1-201ENST00000516133 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
SCARNA16.1-201ENST00000516133 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
SCARNA16.1-201ENST00000516133 LMTK2Q8IWU2 1503 aa16.98■□□□□ 0.31
SCARNA16.1-201ENST00000516133 SPATA31D1Q6ZQQ2 1576 aa16.98■□□□□ 0.31
SCARNA16.1-201ENST00000516133 CEP152O94986 1710 aa16.97■□□□□ 0.31
SCARNA16.1-201ENST00000516133 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
SCARNA16.1-201ENST00000516133 ANKLE2Q86XL3 938 aa16.96■□□□□ 0.31
SCARNA16.1-201ENST00000516133 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.3
SCARNA16.1-201ENST00000516133 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
SCARNA16.1-201ENST00000516133 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
SCARNA16.1-201ENST00000516133 CERKQ8TCT0 537 aa16.92■□□□□ 0.3
SCARNA16.1-201ENST00000516133 NUP155O75694 1391 aa16.91■□□□□ 0.3
SCARNA16.1-201ENST00000516133 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
SCARNA16.1-201ENST00000516133 IDI1Q13907 227 aa16.9■□□□□ 0.3
SCARNA16.1-201ENST00000516133 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
SCARNA16.1-201ENST00000516133 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
SCARNA16.1-201ENST00000516133 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
SCARNA16.1-201ENST00000516133 FBXO41Q8TF61 875 aa16.89■□□□□ 0.29
SCARNA16.1-201ENST00000516133 NOS1P29475 1434 aa16.88■□□□□ 0.29
SCARNA16.1-201ENST00000516133 UNC13BO14795 1591 aa16.88■□□□□ 0.29
SCARNA16.1-201ENST00000516133 NAIPQ13075 1403 aa16.87■□□□□ 0.29
SCARNA16.1-201ENST00000516133 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
SCARNA16.1-201ENST00000516133 TET3O43151 1660 aa16.85■□□□□ 0.29
SCARNA16.1-201ENST00000516133 TXNDC2Q86VQ3 553 aa16.85■□□□□ 0.29
SCARNA16.1-201ENST00000516133 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
SCARNA16.1-201ENST00000516133 MED14O60244 1454 aa16.83■□□□□ 0.28
SCARNA16.1-201ENST00000516133 IQGAP3Q86VI3 1631 aa16.82■□□□□ 0.28
SCARNA16.1-201ENST00000516133 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
SCARNA16.1-201ENST00000516133 TMEM2Q9UHN6 1383 aa16.82■□□□□ 0.28
SCARNA16.1-201ENST00000516133 ZNF335Q9H4Z2 1342 aaPredicted RBP16.82■□□□□ 0.28
SCARNA16.1-201ENST00000516133 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
SCARNA16.1-201ENST00000516133 LTKP29376 864 aa16.81■□□□□ 0.28
SCARNA16.1-201ENST00000516133 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
SCARNA16.1-201ENST00000516133 SYNMO15061 1565 aa16.81■□□□□ 0.28
SCARNA16.1-201ENST00000516133 POLR1AO95602 1720 aaPredicted RBP16.8■□□□□ 0.28
SCARNA16.1-201ENST00000516133 HDGFP51858 240 aaKnown RBP16.8■□□□□ 0.28
SCARNA16.1-201ENST00000516133 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
SCARNA16.1-201ENST00000516133 SLIT1O75093 1534 aa16.8■□□□□ 0.28
SCARNA16.1-201ENST00000516133 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
SCARNA16.1-201ENST00000516133 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
SCARNA16.1-201ENST00000516133 LTBP4Q8N2S1 1624 aa16.79■□□□□ 0.28
SCARNA16.1-201ENST00000516133 NEURL4Q96JN8 1562 aa16.79■□□□□ 0.28
SCARNA16.1-201ENST00000516133 SCAF11Q99590 1463 aaKnown RBP16.79■□□□□ 0.28
SCARNA16.1-201ENST00000516133 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
SCARNA16.1-201ENST00000516133 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
SCARNA16.1-201ENST00000516133 E9PCH4 1651 aa16.76■□□□□ 0.27
SCARNA16.1-201ENST00000516133 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
SCARNA16.1-201ENST00000516133 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
SCARNA16.1-201ENST00000516133 IQSEC2Q5JU85 1478 aa16.74■□□□□ 0.27
SCARNA16.1-201ENST00000516133 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
SCARNA16.1-201ENST00000516133 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
SCARNA16.1-201ENST00000516133 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
SCARNA16.1-201ENST00000516133 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
SCARNA16.1-201ENST00000516133 BCANQ96GW7 911 aa16.71■□□□□ 0.27
SCARNA16.1-201ENST00000516133 CPS1P31327 1500 aa16.7■□□□□ 0.26
SCARNA16.1-201ENST00000516133 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
SCARNA16.1-201ENST00000516133 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
SCARNA16.1-201ENST00000516133 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 368.3 ms