RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 FRMPD1Q5SYB0 1578 aa11.06□□□□□ -0.64
SCARNA20.1-201ENST00000516009 TONSLQ96HA7 1378 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 ANKRD30BQ9BXX2 1392 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 PKD2Q13563 968 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 FOXD1Q16676 465 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 A2MP01023 1474 aa11.05□□□□□ -0.64
SCARNA20.1-201ENST00000516009 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
SCARNA20.1-201ENST00000516009 BCORL1Q5H9F3 1711 aa11.04□□□□□ -0.64
SCARNA20.1-201ENST00000516009 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
SCARNA20.1-201ENST00000516009 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
SCARNA20.1-201ENST00000516009 RPRD2Q5VT52 1461 aaKnown RBP11.03□□□□□ -0.64
SCARNA20.1-201ENST00000516009 RNF17Q9BXT8 1623 aaKnown RBP11.02□□□□□ -0.64
SCARNA20.1-201ENST00000516009 PRDM15P57071 1507 aaPredicted RBP11.02□□□□□ -0.65
SCARNA20.1-201ENST00000516009 KANK1Q14678 1352 aa11.02□□□□□ -0.65
SCARNA20.1-201ENST00000516009 TET3O43151 1660 aa11.01□□□□□ -0.65
SCARNA20.1-201ENST00000516009 KIF3BO15066 747 aa11.01□□□□□ -0.65
SCARNA20.1-201ENST00000516009 MROH1Q8NDA8 1641 aa11.01□□□□□ -0.65
SCARNA20.1-201ENST00000516009 VWDEQ8N2E2 1590 aa11□□□□□ -0.65
SCARNA20.1-201ENST00000516009 E9PCH4 1651 aa11□□□□□ -0.65
SCARNA20.1-201ENST00000516009 CEP152O94986 1710 aa10.99□□□□□ -0.65
SCARNA20.1-201ENST00000516009 YEATS2Q9ULM3 1422 aa10.99□□□□□ -0.65
SCARNA20.1-201ENST00000516009 PPP1R15AO75807 674 aaPredicted RBP10.98□□□□□ -0.65
SCARNA20.1-201ENST00000516009 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
SCARNA20.1-201ENST00000516009 REREQ9P2R6 1566 aa10.97□□□□□ -0.65
SCARNA20.1-201ENST00000516009 ATP10AO60312 1499 aa10.96□□□□□ -0.65
SCARNA20.1-201ENST00000516009 ZNF316A6NFI3 1004 aaPredicted RBP10.96□□□□□ -0.65
SCARNA20.1-201ENST00000516009 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
SCARNA20.1-201ENST00000516009 LMTK2Q8IWU2 1503 aa10.95□□□□□ -0.66
SCARNA20.1-201ENST00000516009 COL17A1Q9UMD9 1497 aaPredicted RBP10.95□□□□□ -0.66
SCARNA20.1-201ENST00000516009 CCDC144AA2RUR9 1427 aa10.95□□□□□ -0.66
SCARNA20.1-201ENST00000516009 ZC3H13Q5T200 1668 aaKnown RBP10.95□□□□□ -0.66
SCARNA20.1-201ENST00000516009 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
SCARNA20.1-201ENST00000516009 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20.1-201ENST00000516009 L3MBTL2Q969R5 705 aa10.94□□□□□ -0.66
SCARNA20.1-201ENST00000516009 PLA2R1Q13018 1463 aa10.93□□□□□ -0.66
SCARNA20.1-201ENST00000516009 CAMSAP1Q5T5Y3 1602 aa10.93□□□□□ -0.66
SCARNA20.1-201ENST00000516009 TRPM2O94759 1503 aa10.93□□□□□ -0.66
SCARNA20.1-201ENST00000516009 GGT6Q6P531 493 aa10.92□□□□□ -0.66
SCARNA20.1-201ENST00000516009 ABCC3O15438 1527 aa10.92□□□□□ -0.66
SCARNA20.1-201ENST00000516009 AGLP35573 1532 aa10.92□□□□□ -0.66
SCARNA20.1-201ENST00000516009 CFAP65Q6ZU64 1925 aaKnown RBP10.91□□□□□ -0.66
SCARNA20.1-201ENST00000516009 PTPRTO14522 1441 aa10.91□□□□□ -0.66
SCARNA20.1-201ENST00000516009 CLTCL1P53675 1640 aa10.9□□□□□ -0.66
SCARNA20.1-201ENST00000516009 WASHC2CQ9Y4E1 1318 aa10.89□□□□□ -0.67
SCARNA20.1-201ENST00000516009 KIF1BO60333 1816 aa10.89□□□□□ -0.67
SCARNA20.1-201ENST00000516009 SIGLEC1Q9BZZ2 1709 aa10.89□□□□□ -0.67
SCARNA20.1-201ENST00000516009 NPATQ14207 1427 aa10.86□□□□□ -0.67
SCARNA20.1-201ENST00000516009 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
SCARNA20.1-201ENST00000516009 CLTCQ00610 1675 aaKnown RBP10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 ARHGAP31Q2M1Z3 1444 aa10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 UHRF1BP1Q6BDS2 1440 aa10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 SPATA31E1Q6ZUB1 1445 aa10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 PPP6R1Q9UPN7 881 aa10.85□□□□□ -0.67
SCARNA20.1-201ENST00000516009 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
SCARNA20.1-201ENST00000516009 RGL3Q3MIN7 710 aa10.84□□□□□ -0.67
SCARNA20.1-201ENST00000516009 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
SCARNA20.1-201ENST00000516009 PREX1Q8TCU6 1659 aa10.84□□□□□ -0.67
SCARNA20.1-201ENST00000516009 UGGT1Q9NYU2 1555 aa10.83□□□□□ -0.68
SCARNA20.1-201ENST00000516009 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
SCARNA20.1-201ENST00000516009 RALGAPBQ86X10 1494 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 DIEXFQ68CQ4 756 aaKnown RBP10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 KDM2AQ9Y2K7 1162 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 TRPM1Q7Z4N2 1603 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 NOS1P29475 1434 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 MROH2AA6NES4 1674 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 SYNMO15061 1565 aa10.82□□□□□ -0.68
SCARNA20.1-201ENST00000516009 IFT172Q9UG01 1749 aa10.81□□□□□ -0.68
SCARNA20.1-201ENST00000516009 MLECQ14165 292 aa10.81□□□□□ -0.68
SCARNA20.1-201ENST00000516009 ADGRB3O60242 1522 aa10.8□□□□□ -0.68
SCARNA20.1-201ENST00000516009 EIF4G2P78344 907 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCARNA20.1-201ENST00000516009 STAC3Q96MF2 364 aa10.8□□□□□ -0.68
SCARNA20.1-201ENST00000516009 PRAG1Q86YV5 1406 aa10.8□□□□□ -0.68
SCARNA20.1-201ENST00000516009 ARID4BQ4LE39 1312 aaPredicted RBP10.8□□□□□ -0.68
SCARNA20.1-201ENST00000516009 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
SCARNA20.1-201ENST00000516009 MADDQ8WXG6 1647 aa10.79□□□□□ -0.68
SCARNA20.1-201ENST00000516009 HIRIP3Q9BW71 556 aaPredicted RBP10.78□□□□□ -0.68
SCARNA20.1-201ENST00000516009 ERVK-7P63135 1459 aa10.78□□□□□ -0.68
SCARNA20.1-201ENST00000516009 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
SCARNA20.1-201ENST00000516009 PPLO60437 1756 aa10.77□□□□□ -0.68
SCARNA20.1-201ENST00000516009 LAMC1P11047 1609 aa10.77□□□□□ -0.68
SCARNA20.1-201ENST00000516009 HSPA5P11021 654 aaKnown RBP10.77□□□□□ -0.69
SCARNA20.1-201ENST00000516009 MYO5BQ9ULV0 1848 aa10.77□□□□□ -0.69
SCARNA20.1-201ENST00000516009 MYOM2P54296 1465 aa10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 KIAA1210Q9ULL0 1709 aa10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 FER1L4A9Z1Z3 1794 aa10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 SLC52A1Q9NWF4 448 aa10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 SPATA31D1Q6ZQQ2 1576 aa10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 ROCK2O75116 1388 aaKnown RBP10.76□□□□□ -0.69
SCARNA20.1-201ENST00000516009 CARD11Q9BXL7 1154 aa10.75□□□□□ -0.69
SCARNA20.1-201ENST00000516009 USP47Q96K76 1375 aa10.75□□□□□ -0.69
SCARNA20.1-201ENST00000516009 TMEM131LA2VDJ0 1609 aa10.74□□□□□ -0.69
SCARNA20.1-201ENST00000516009 IDI1Q13907 227 aa10.73□□□□□ -0.69
SCARNA20.1-201ENST00000516009 FBXO31Q5XUX0 539 aaPredicted RBP10.73□□□□□ -0.69
SCARNA20.1-201ENST00000516009 RPGRIP1LQ68CZ1 1315 aa10.73□□□□□ -0.69
SCARNA20.1-201ENST00000516009 ZMYM3Q14202 1370 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms