RNA–Protein interactions for RNA: ENST00000515918.1

RNU6-488P-201, Transcript of RNA, U6 small nuclear 488, pseudogene, humanhuman

BASIC

Gene RNU6-488P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-488P-201ENST00000515918 PLCG2P16885 1265 aa7.74□□□□□ -1.17
RNU6-488P-201ENST00000515918 SSTR3P32745 418 aaPredicted RBP7.74□□□□□ -1.17
RNU6-488P-201ENST00000515918 SKIV2LQ15477 1246 aaKnown RBP7.74□□□□□ -1.17
RNU6-488P-201ENST00000515918 L3MBTL3Q96JM7 780 aaPredicted RBP7.74□□□□□ -1.17
RNU6-488P-201ENST00000515918 GPCPD1Q9NPB8 672 aa7.74□□□□□ -1.17
RNU6-488P-201ENST00000515918 EVX2Q03828 476 aa7.73□□□□□ -1.17
RNU6-488P-201ENST00000515918 EN1Q05925 392 aaPredicted RBP7.73□□□□□ -1.17
RNU6-488P-201ENST00000515918 FNBP4Q8N3X1 1017 aaPredicted RBP7.73□□□□□ -1.17
RNU6-488P-201ENST00000515918 POM121Q96HA1 1249 aa7.73□□□□□ -1.17
RNU6-488P-201ENST00000515918 ZNF777Q9ULD5 760 aaPredicted RBP7.72□□□□□ -1.17
RNU6-488P-201ENST00000515918 PHF14O94880 888 aa7.71□□□□□ -1.18
RNU6-488P-201ENST00000515918 PDIA4P13667 645 aaKnown RBP7.71□□□□□ -1.18
RNU6-488P-201ENST00000515918 NECTIN2Q92692 538 aa7.71□□□□□ -1.18
RNU6-488P-201ENST00000515918 BEGAINQ9BUH8 593 aa7.71□□□□□ -1.18
RNU6-488P-201ENST00000515918 CLCN6P51797 869 aa7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 TSR1Q2NL82 804 aaKnown RBP7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 FAM161AQ3B820 660 aa7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 PROSER2Q86WR7 435 aaPredicted RBP7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 EPAS1Q99814 870 aa7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 POLR3EQ9NVU0 708 aa7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 COLQQ9Y215 455 aaPredicted RBP7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 PCDHGA10Q9Y5H3 936 aa7.7□□□□□ -1.18
RNU6-488P-201ENST00000515918 MAP3K7O43318 606 aa7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 SLC34A2O95436 690 aa7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 NLRP7Q8WX94 980 aa7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 RBM33Q96EV2 1170 aaKnown RBP7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 FAM217BQ9NTX9 383 aaPredicted RBP7.69□□□□□ -1.18
RNU6-488P-201ENST00000515918 RANGAP1P46060 587 aaPredicted RBP7.68□□□□□ -1.18
RNU6-488P-201ENST00000515918 FBXO31Q5XUX0 539 aaPredicted RBP7.67□□□□□ -1.18
RNU6-488P-201ENST00000515918 METTL3Q86U44 580 aaKnown RBP7.67□□□□□ -1.18
RNU6-488P-201ENST00000515918 PELP1Q8IZL8 1130 aaKnown RBP7.67□□□□□ -1.18
RNU6-488P-201ENST00000515918 MYSM1Q5VVJ2 828 aa7.66□□□□□ -1.18
RNU6-488P-201ENST00000515918 NPM2Q86SE8 214 aaKnown RBP7.66□□□□□ -1.18
RNU6-488P-201ENST00000515918 SLAIN1Q8ND83 568 aa7.66□□□□□ -1.18
RNU6-488P-201ENST00000515918 POTEFA5A3E0 1075 aa7.65□□□□□ -1.18
RNU6-488P-201ENST00000515918 COG6Q9Y2V7 657 aa7.65□□□□□ -1.18
RNU6-488P-201ENST00000515918 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
RNU6-488P-201ENST00000515918 TYW1BQ6NUM6 668 aa7.64□□□□□ -1.19
RNU6-488P-201ENST00000515918 PXYLP1Q8TE99 480 aa7.64□□□□□ -1.19
RNU6-488P-201ENST00000515918 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
RNU6-488P-201ENST00000515918 ADGRG1Q9Y653 693 aa7.64□□□□□ -1.19
RNU6-488P-201ENST00000515918 KDM4FA0A1W2PPD8 638 aa7.63□□□□□ -1.19
RNU6-488P-201ENST00000515918 SPDYE5A6NIY4 337 aa7.63□□□□□ -1.19
RNU6-488P-201ENST00000515918 HAX1O00165 279 aa7.63□□□□□ -1.19
RNU6-488P-201ENST00000515918 OATP04181 439 aa7.63□□□□□ -1.19
RNU6-488P-201ENST00000515918 SERPINA10Q9UK55 444 aa7.63□□□□□ -1.19
RNU6-488P-201ENST00000515918 RAD21O60216 631 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 SEC24BO95487 1268 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 CLK2P49760 499 aaKnown RBP7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 PADI6Q6TGC4 694 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 TTC13Q8NBP0 860 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 PLSCR2Q9NRY7 297 aa7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 ATP1B4Q9UN42 357 aaPredicted RBP7.62□□□□□ -1.19
RNU6-488P-201ENST00000515918 RFC5P40937 340 aa7.61□□□□□ -1.19
RNU6-488P-201ENST00000515918 BANK1Q8NDB2 785 aa7.61□□□□□ -1.19
RNU6-488P-201ENST00000515918 TRAIPQ9BWF2 469 aa7.61□□□□□ -1.19
RNU6-488P-201ENST00000515918 PCDHGA4Q9Y5G9 962 aa7.61□□□□□ -1.19
RNU6-488P-201ENST00000515918 FBXW7Q969H0 707 aa7.6□□□□□ -1.19
RNU6-488P-201ENST00000515918 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
RNU6-488P-201ENST00000515918 JPH4Q96JJ6 628 aa7.6□□□□□ -1.19
RNU6-488P-201ENST00000515918 LIMD1Q9UGP4 676 aa7.6□□□□□ -1.19
RNU6-488P-201ENST00000515918 C6orf132Q5T0Z8 1188 aa7.59□□□□□ -1.19
RNU6-488P-201ENST00000515918 FOSBP53539 338 aa7.58□□□□□ -1.2
RNU6-488P-201ENST00000515918 PPP2R2DQ66LE6 453 aa7.58□□□□□ -1.2
RNU6-488P-201ENST00000515918 CERKQ8TCT0 537 aa7.57□□□□□ -1.2
RNU6-488P-201ENST00000515918 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
RNU6-488P-201ENST00000515918 CCDC9Q9Y3X0 531 aaKnown RBP7.57□□□□□ -1.2
RNU6-488P-201ENST00000515918 TMEM259Q4ZIN3 620 aa7.56□□□□□ -1.2
RNU6-488P-201ENST00000515918 C3orf67Q6ZVT6 689 aa7.56□□□□□ -1.2
RNU6-488P-201ENST00000515918 MTMR14Q8NCE2 650 aa7.56□□□□□ -1.2
RNU6-488P-201ENST00000515918 SPIRE2Q8WWL2 714 aa7.56□□□□□ -1.2
RNU6-488P-201ENST00000515918 GABBR2O75899 941 aa7.55□□□□□ -1.2
RNU6-488P-201ENST00000515918 RIC3Q7Z5B4 369 aa7.55□□□□□ -1.2
RNU6-488P-201ENST00000515918 RBM27Q9P2N5 1060 aaKnown RBP7.55□□□□□ -1.2
RNU6-488P-201ENST00000515918 DIXDC1Q155Q3 683 aa7.54□□□□□ -1.2
RNU6-488P-201ENST00000515918 SLC39A7Q92504 469 aa7.54□□□□□ -1.2
RNU6-488P-201ENST00000515918 GDPD2Q9HCC8 539 aa7.54□□□□□ -1.2
RNU6-488P-201ENST00000515918 FAM198AQ9UFP1 575 aa7.54□□□□□ -1.2
RNU6-488P-201ENST00000515918 SPTLC1O15269 473 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 C7P10643 843 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 PRSS12P56730 875 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 RETREG2Q8NC44 543 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 ZDHHC16Q969W1 377 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 ADAM33Q9BZ11 813 aa7.53□□□□□ -1.2
RNU6-488P-201ENST00000515918 TUSC1Q2TAM9 212 aa7.52□□□□□ -1.21
RNU6-488P-201ENST00000515918 KCTD17Q8N5Z5 321 aa7.52□□□□□ -1.21
RNU6-488P-201ENST00000515918 RBM46Q8TBY0 533 aaKnown RBP7.52□□□□□ -1.21
RNU6-488P-201ENST00000515918 CDCA7LQ96GN5 454 aa7.52□□□□□ -1.21
RNU6-488P-201ENST00000515918 CD46P15529 392 aa7.51□□□□□ -1.21
RNU6-488P-201ENST00000515918 IRF5Q13568 498 aa7.51□□□□□ -1.21
RNU6-488P-201ENST00000515918 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
RNU6-488P-201ENST00000515918 EYA1Q99502 592 aa7.51□□□□□ -1.21
RNU6-488P-201ENST00000515918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.5□□□□□ -1.21
RNU6-488P-201ENST00000515918 RCCD1A6NED2 376 aa7.5□□□□□ -1.21
RNU6-488P-201ENST00000515918 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
RNU6-488P-201ENST00000515918 QPCTQ16769 361 aa7.5□□□□□ -1.21
RNU6-488P-201ENST00000515918 RSBN1LQ6PCB5 846 aaPredicted RBP7.5□□□□□ -1.21
RNU6-488P-201ENST00000515918 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms