RNA–Protein interactions for RNA: ENST00000515877.5

GPN1-210, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 1,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-210ENST00000515877 RSPH4AQ5TD94 716 aa12.36□□□□□ -0.43
GPN1-210ENST00000515877 NCOA1Q15788 1441 aa12.36□□□□□ -0.43
GPN1-210ENST00000515877 ANKRD30AQ9BXX3 1397 aa12.35□□□□□ -0.43
GPN1-210ENST00000515877 ARAP3Q8WWN8 1544 aa12.35□□□□□ -0.43
GPN1-210ENST00000515877 HS6ST3Q8IZP7 471 aa12.34□□□□□ -0.43
GPN1-210ENST00000515877 CCDC141Q6ZP82 1450 aa12.34□□□□□ -0.43
GPN1-210ENST00000515877 MAST1Q9Y2H9 1570 aa12.33□□□□□ -0.43
GPN1-210ENST00000515877 C9orf84Q5VXU9 1444 aa12.33□□□□□ -0.43
GPN1-210ENST00000515877 MBD5Q9P267 1494 aa12.33□□□□□ -0.44
GPN1-210ENST00000515877 WDR7Q9Y4E6 1490 aa12.33□□□□□ -0.44
GPN1-210ENST00000515877 MIER1Q8N108 512 aa12.33□□□□□ -0.44
GPN1-210ENST00000515877 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
GPN1-210ENST00000515877 PLCH2O75038 1416 aa12.32□□□□□ -0.44
GPN1-210ENST00000515877 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
GPN1-210ENST00000515877 TSPY4P0CV99 314 aa12.31□□□□□ -0.44
GPN1-210ENST00000515877 TSPY10P0CW01 314 aa12.31□□□□□ -0.44
GPN1-210ENST00000515877 HOMEZQ8IX15 550 aa12.31□□□□□ -0.44
GPN1-210ENST00000515877 ABCA9Q8IUA7 1624 aa12.31□□□□□ -0.44
GPN1-210ENST00000515877 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
GPN1-210ENST00000515877 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
GPN1-210ENST00000515877 KCNH8Q96L42 1107 aa12.29□□□□□ -0.44
GPN1-210ENST00000515877 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
GPN1-210ENST00000515877 EFCAB2Q5VUJ9 269 aa12.28□□□□□ -0.44
GPN1-210ENST00000515877 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
GPN1-210ENST00000515877 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
GPN1-210ENST00000515877 ABCC1P33527 1531 aa12.27□□□□□ -0.44
GPN1-210ENST00000515877 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.44
GPN1-210ENST00000515877 NEUROD1Q13562 356 aa12.27□□□□□ -0.44
GPN1-210ENST00000515877 MPHOSPH9Q99550 1183 aa12.27□□□□□ -0.44
GPN1-210ENST00000515877 DENND4BO75064 1496 aaPredicted RBP12.27□□□□□ -0.45
GPN1-210ENST00000515877 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
GPN1-210ENST00000515877 KDM5DQ9BY66 1539 aa12.26□□□□□ -0.45
GPN1-210ENST00000515877 TONSLQ96HA7 1378 aa12.26□□□□□ -0.45
GPN1-210ENST00000515877 KIF15Q9NS87 1388 aa12.25□□□□□ -0.45
GPN1-210ENST00000515877 ASXL2Q76L83 1435 aa12.25□□□□□ -0.45
GPN1-210ENST00000515877 CAPN15O75808 1086 aa12.25□□□□□ -0.45
GPN1-210ENST00000515877 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
GPN1-210ENST00000515877 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
GPN1-210ENST00000515877 ZBTB47Q9UFB7 747 aaPredicted RBP12.25□□□□□ -0.45
GPN1-210ENST00000515877 PZPP20742 1482 aa12.24□□□□□ -0.45
GPN1-210ENST00000515877 CFAP74Q9C0B2 1584 aa12.23□□□□□ -0.45
GPN1-210ENST00000515877 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
GPN1-210ENST00000515877 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
GPN1-210ENST00000515877 DUOX2Q9NRD8 1548 aa12.21□□□□□ -0.45
GPN1-210ENST00000515877 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.46
GPN1-210ENST00000515877 ARHGEF12Q9NZN5 1544 aa12.21□□□□□ -0.46
GPN1-210ENST00000515877 UNC13BO14795 1591 aa12.21□□□□□ -0.46
GPN1-210ENST00000515877 FANCAO15360 1455 aa12.19□□□□□ -0.46
GPN1-210ENST00000515877 RTEL1-TNFRSF6BF6WH68 1400 aa12.19□□□□□ -0.46
GPN1-210ENST00000515877 RPRD2Q5VT52 1461 aaKnown RBP12.19□□□□□ -0.46
GPN1-210ENST00000515877 ERBINQ96RT1 1412 aa12.18□□□□□ -0.46
GPN1-210ENST00000515877 RIMBP3CA6NJZ7 1639 aa12.18□□□□□ -0.46
GPN1-210ENST00000515877 RIMBP3BA6NNM3 1639 aa12.18□□□□□ -0.46
GPN1-210ENST00000515877 RIMBP3Q9UFD9 1639 aa12.18□□□□□ -0.46
GPN1-210ENST00000515877 NUP155O75694 1391 aa12.17□□□□□ -0.46
GPN1-210ENST00000515877 IQGAP3Q86VI3 1631 aa12.16□□□□□ -0.46
GPN1-210ENST00000515877 INO80Q9ULG1 1556 aaPredicted RBP12.16□□□□□ -0.46
GPN1-210ENST00000515877 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
GPN1-210ENST00000515877 TRAPPC8Q9Y2L5 1435 aa12.16□□□□□ -0.46
GPN1-210ENST00000515877 ADGRL1O94910 1474 aa12.15□□□□□ -0.46
GPN1-210ENST00000515877 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
GPN1-210ENST00000515877 SPAG9O60271 1321 aaKnown RBP12.14□□□□□ -0.47
GPN1-210ENST00000515877 MAGI2Q86UL8 1455 aa12.14□□□□□ -0.47
GPN1-210ENST00000515877 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
GPN1-210ENST00000515877 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
GPN1-210ENST00000515877 ATP7AQ04656 1500 aa12.14□□□□□ -0.47
GPN1-210ENST00000515877 CD109Q6YHK3 1445 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
GPN1-210ENST00000515877 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
GPN1-210ENST00000515877 EIF2AK4Q9P2K8 1649 aaKnown RBP12.12□□□□□ -0.47
GPN1-210ENST00000515877 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 SCAPERQ9BY12 1400 aa12.12□□□□□ -0.47
GPN1-210ENST00000515877 ABCB7O75027 752 aa12.11□□□□□ -0.47
GPN1-210ENST00000515877 DEPDC5O75140 1603 aa12.11□□□□□ -0.47
GPN1-210ENST00000515877 GLI2P10070 1586 aa12.11□□□□□ -0.47
GPN1-210ENST00000515877 ZNF518AQ6AHZ1 1483 aa12.1□□□□□ -0.47
GPN1-210ENST00000515877 NEO1Q92859 1461 aa12.1□□□□□ -0.47
GPN1-210ENST00000515877 MAP3K4Q9Y6R4 1608 aa12.1□□□□□ -0.47
GPN1-210ENST00000515877 KIDINS220Q9ULH0 1771 aa12.08□□□□□ -0.48
GPN1-210ENST00000515877 L3MBTL2Q969R5 705 aa12.08□□□□□ -0.48
GPN1-210ENST00000515877 KDM5CP41229 1560 aa12.08□□□□□ -0.48
GPN1-210ENST00000515877 AFAP1Q8N556 730 aa12.08□□□□□ -0.48
GPN1-210ENST00000515877 GSE1Q14687 1217 aa12.07□□□□□ -0.48
GPN1-210ENST00000515877 HECW2Q9P2P5 1572 aa12.06□□□□□ -0.48
GPN1-210ENST00000515877 POGZQ7Z3K3 1410 aa12.06□□□□□ -0.48
GPN1-210ENST00000515877 CYB5RLQ6IPT4 315 aa12.06□□□□□ -0.48
GPN1-210ENST00000515877 ATP10AO60312 1499 aa12.05□□□□□ -0.48
GPN1-210ENST00000515877 TET3O43151 1660 aa12.05□□□□□ -0.48
GPN1-210ENST00000515877 MLH3Q9UHC1 1453 aa12.05□□□□□ -0.48
GPN1-210ENST00000515877 RIOK3O14730 519 aaKnown RBP12.04□□□□□ -0.48
GPN1-210ENST00000515877 DHX29Q7Z478 1369 aaKnown RBP12.04□□□□□ -0.48
GPN1-210ENST00000515877 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
GPN1-210ENST00000515877 PRDM15P57071 1507 aaPredicted RBP12.03□□□□□ -0.48
GPN1-210ENST00000515877 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
GPN1-210ENST00000515877 E9PCH4 1651 aa12.03□□□□□ -0.48
GPN1-210ENST00000515877 KANK1Q14678 1352 aa12.03□□□□□ -0.48
GPN1-210ENST00000515877 DIP2BQ9P265 1576 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms