RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
ATR-209ENST00000515810 KHSRPQ92945 711 aaKnown RBP eCLIP12.99□□□□□ -0.33
ATR-209ENST00000515810 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
ATR-209ENST00000515810 SNPHO15079 494 aa12.98□□□□□ -0.33
ATR-209ENST00000515810 GPR153Q6NV75 609 aa12.98□□□□□ -0.33
ATR-209ENST00000515810 MAP3K7O43318 606 aa12.96□□□□□ -0.33
ATR-209ENST00000515810 ARSIQ5FYB1 569 aa12.96□□□□□ -0.33
ATR-209ENST00000515810 FAM117AQ9C073 453 aa12.96□□□□□ -0.33
ATR-209ENST00000515810 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
ATR-209ENST00000515810 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
ATR-209ENST00000515810 EPAS1Q99814 870 aa12.95□□□□□ -0.34
ATR-209ENST00000515810 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
ATR-209ENST00000515810 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
ATR-209ENST00000515810 AMHR2Q16671 573 aa12.93□□□□□ -0.34
ATR-209ENST00000515810 NUDT7P0C024 238 aa12.91□□□□□ -0.34
ATR-209ENST00000515810 TYW1BQ6NUM6 668 aa12.91□□□□□ -0.34
ATR-209ENST00000515810 PLEKHG3A1L390 1219 aa12.9□□□□□ -0.34
ATR-209ENST00000515810 FOSBP53539 338 aa12.9□□□□□ -0.34
ATR-209ENST00000515810 JPH4Q96JJ6 628 aa12.9□□□□□ -0.34
ATR-209ENST00000515810 REPIN1Q9BWE0 567 aaKnown RBP12.9□□□□□ -0.34
ATR-209ENST00000515810 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
ATR-209ENST00000515810 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
ATR-209ENST00000515810 C14orf37Q86TY3 774 aa12.89□□□□□ -0.35
ATR-209ENST00000515810 PHOX2BQ99453 314 aa12.88□□□□□ -0.35
ATR-209ENST00000515810 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
ATR-209ENST00000515810 ST18O60284 1047 aa12.84□□□□□ -0.35
ATR-209ENST00000515810 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
ATR-209ENST00000515810 C6orf132Q5T0Z8 1188 aa12.84□□□□□ -0.35
ATR-209ENST00000515810 MS4A1P11836 297 aa12.83□□□□□ -0.36
ATR-209ENST00000515810 FBXW7Q969H0 707 aa12.83□□□□□ -0.36
ATR-209ENST00000515810 ADAM33Q9BZ11 813 aa12.83□□□□□ -0.36
ATR-209ENST00000515810 NLRP7Q8WX94 980 aa12.82□□□□□ -0.36
ATR-209ENST00000515810 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
ATR-209ENST00000515810 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
ATR-209ENST00000515810 GIGYF2Q6Y7W6 1299 aaKnown RBP12.81□□□□□ -0.36
ATR-209ENST00000515810 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
ATR-209ENST00000515810 CDAN1Q8IWY9 1227 aa12.8□□□□□ -0.36
ATR-209ENST00000515810 TMUB1Q9BVT8 246 aa12.79□□□□□ -0.36
ATR-209ENST00000515810 MDM2Q00987 491 aaPredicted RBP12.78□□□□□ -0.36
ATR-209ENST00000515810 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
ATR-209ENST00000515810 ERICH6Q7L0X2 663 aa12.75□□□□□ -0.37
ATR-209ENST00000515810 TTC13Q8NBP0 860 aa12.74□□□□□ -0.37
ATR-209ENST00000515810 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
ATR-209ENST00000515810 COL9A1P20849 921 aa12.73□□□□□ -0.37
ATR-209ENST00000515810 METTL3Q86U44 580 aaKnown RBP12.73□□□□□ -0.37
ATR-209ENST00000515810 MARVELD3Q96A59 401 aa12.73□□□□□ -0.37
ATR-209ENST00000515810 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
ATR-209ENST00000515810 DAXXQ9UER7 740 aaPredicted RBP12.72□□□□□ -0.37
ATR-209ENST00000515810 PXYLP1Q8TE99 480 aa12.7□□□□□ -0.38
ATR-209ENST00000515810 GPCPD1Q9NPB8 672 aa12.7□□□□□ -0.38
ATR-209ENST00000515810 CLCN1P35523 988 aa12.69□□□□□ -0.38
ATR-209ENST00000515810 PRSS12P56730 875 aa12.69□□□□□ -0.38
ATR-209ENST00000515810 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
ATR-209ENST00000515810 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
ATR-209ENST00000515810 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
ATR-209ENST00000515810 C3orf80F5H4A9 247 aa12.68□□□□□ -0.38
ATR-209ENST00000515810 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
ATR-209ENST00000515810 EMP3P54852 163 aa12.68□□□□□ -0.38
ATR-209ENST00000515810 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
ATR-209ENST00000515810 ERBB3P21860 1342 aa12.66□□□□□ -0.38
ATR-209ENST00000515810 OATP04181 439 aa12.66□□□□□ -0.38
ATR-209ENST00000515810 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
ATR-209ENST00000515810 POTEB3A0JP26 581 aa12.64□□□□□ -0.39
ATR-209ENST00000515810 POTEBQ6S5H4 581 aa12.64□□□□□ -0.39
ATR-209ENST00000515810 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
ATR-209ENST00000515810 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
ATR-209ENST00000515810 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
ATR-209ENST00000515810 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
ATR-209ENST00000515810 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
ATR-209ENST00000515810 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
ATR-209ENST00000515810 BEGAINQ9BUH8 593 aa12.62□□□□□ -0.39
ATR-209ENST00000515810 GOPCQ9HD26 462 aa12.6□□□□□ -0.39
ATR-209ENST00000515810 EYA1Q99502 592 aa12.59□□□□□ -0.39
ATR-209ENST00000515810 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
ATR-209ENST00000515810 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
ATR-209ENST00000515810 PTPREP23469 700 aa12.57□□□□□ -0.4
ATR-209ENST00000515810 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
ATR-209ENST00000515810 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
ATR-209ENST00000515810 RBM46Q8TBY0 533 aaKnown RBP12.57□□□□□ -0.4
ATR-209ENST00000515810 RCCD1A6NED2 376 aa12.56□□□□□ -0.4
ATR-209ENST00000515810 PROX2Q3B8N5 592 aa12.56□□□□□ -0.4
ATR-209ENST00000515810 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
ATR-209ENST00000515810 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
ATR-209ENST00000515810 ZNF687Q8N1G0 1237 aa12.55□□□□□ -0.4
ATR-209ENST00000515810 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
ATR-209ENST00000515810 POLR3EQ9NVU0 708 aa12.54□□□□□ -0.4
ATR-209ENST00000515810 SMAPO00193 183 aa12.53□□□□□ -0.4
ATR-209ENST00000515810 KCNK17Q96T54 332 aa12.53□□□□□ -0.4
ATR-209ENST00000515810 TRIM6-TRIM34B2RNG4 842 aa12.52□□□□□ -0.41
ATR-209ENST00000515810 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
ATR-209ENST00000515810 SKIV2LQ15477 1246 aaKnown RBP12.52□□□□□ -0.41
ATR-209ENST00000515810 ZMYND15Q9H091 742 aa12.52□□□□□ -0.41
ATR-209ENST00000515810 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
ATR-209ENST00000515810 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
ATR-209ENST00000515810 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
ATR-209ENST00000515810 AXIN2Q9Y2T1 843 aa12.51□□□□□ -0.41
ATR-209ENST00000515810 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.5□□□□□ -0.41
ATR-209ENST00000515810 PSEN2P49810 448 aa12.5□□□□□ -0.41
ATR-209ENST00000515810 FBXO31Q5XUX0 539 aaPredicted RBP12.5□□□□□ -0.41
ATR-209ENST00000515810 SPNS2Q8IVW8 549 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms