RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 PDIA6Q15084 440 aa12.84□□□□□ -0.35
SFXN1-211ENST00000515736 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.35
SFXN1-211ENST00000515736 PDE4DQ08499 809 aa12.83□□□□□ -0.36
SFXN1-211ENST00000515736 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
SFXN1-211ENST00000515736 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
SFXN1-211ENST00000515736 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
SFXN1-211ENST00000515736 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
SFXN1-211ENST00000515736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
SFXN1-211ENST00000515736 DSG2Q14126 1118 aa12.79□□□□□ -0.36
SFXN1-211ENST00000515736 GPR37O15354 613 aa12.78□□□□□ -0.36
SFXN1-211ENST00000515736 TIE1P35590 1138 aa12.78□□□□□ -0.36
SFXN1-211ENST00000515736 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
SFXN1-211ENST00000515736 KIF13AQ9H1H9 1805 aa12.77□□□□□ -0.37
SFXN1-211ENST00000515736 PRG4Q92954 1404 aaPredicted RBP12.77□□□□□ -0.37
SFXN1-211ENST00000515736 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
SFXN1-211ENST00000515736 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
SFXN1-211ENST00000515736 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
SFXN1-211ENST00000515736 FOXK1P85037 733 aa12.74□□□□□ -0.37
SFXN1-211ENST00000515736 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
SFXN1-211ENST00000515736 CEP162Q5TB80 1403 aa12.71□□□□□ -0.37
SFXN1-211ENST00000515736 MICALL2Q8IY33 904 aa12.71□□□□□ -0.37
SFXN1-211ENST00000515736 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
SFXN1-211ENST00000515736 DPY19L2Q6NUT2 758 aa12.7□□□□□ -0.38
SFXN1-211ENST00000515736 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
SFXN1-211ENST00000515736 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
SFXN1-211ENST00000515736 FAM117AQ9C073 453 aa12.69□□□□□ -0.38
SFXN1-211ENST00000515736 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
SFXN1-211ENST00000515736 BMP2KQ9NSY1 1161 aaPredicted RBP12.69□□□□□ -0.38
SFXN1-211ENST00000515736 CUL7Q14999 1698 aa12.68□□□□□ -0.38
SFXN1-211ENST00000515736 KIF27Q86VH2 1401 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 HRCP23327 699 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 PLPP6Q8IY26 295 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
SFXN1-211ENST00000515736 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
SFXN1-211ENST00000515736 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
SFXN1-211ENST00000515736 TSPOAP1O95153 1857 aa12.64□□□□□ -0.39
SFXN1-211ENST00000515736 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-211ENST00000515736 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
SFXN1-211ENST00000515736 FAM69CQ0P6D2 419 aa12.64□□□□□ -0.39
SFXN1-211ENST00000515736 MAPKBP1O60336 1514 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 KIAA0586Q9BVV6 1533 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 PLEKHG3A1L390 1219 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 IRF6O14896 467 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 AMHR2Q16671 573 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 ABCC10Q5T3U5 1492 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 DIP2BQ9P265 1576 aa12.63□□□□□ -0.39
SFXN1-211ENST00000515736 NUTM2FA1L443 756 aa12.62□□□□□ -0.39
SFXN1-211ENST00000515736 DDRGK1Q96HY6 314 aa12.62□□□□□ -0.39
SFXN1-211ENST00000515736 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
SFXN1-211ENST00000515736 KIF3CO14782 793 aa12.61□□□□□ -0.39
SFXN1-211ENST00000515736 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
SFXN1-211ENST00000515736 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
SFXN1-211ENST00000515736 IGF1RP08069 1367 aa12.6□□□□□ -0.39
SFXN1-211ENST00000515736 C2orf72A6NCS6 295 aa12.6□□□□□ -0.39
SFXN1-211ENST00000515736 OSBPP22059 807 aa12.6□□□□□ -0.39
SFXN1-211ENST00000515736 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
SFXN1-211ENST00000515736 TMEM121BQ9BXQ6 578 aaPredicted RBP12.6□□□□□ -0.39
SFXN1-211ENST00000515736 GNPATO15228 680 aa12.59□□□□□ -0.39
SFXN1-211ENST00000515736 PARP9Q8IXQ6 854 aa12.59□□□□□ -0.39
SFXN1-211ENST00000515736 KDM6BO15054 1643 aa12.59□□□□□ -0.39
SFXN1-211ENST00000515736 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
SFXN1-211ENST00000515736 HIC1Q14526 733 aa12.56□□□□□ -0.4
SFXN1-211ENST00000515736 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
SFXN1-211ENST00000515736 PTPRGP23470 1445 aa12.55□□□□□ -0.4
SFXN1-211ENST00000515736 CLIP1P30622 1438 aa12.55□□□□□ -0.4
SFXN1-211ENST00000515736 FCHSD2O94868 740 aa12.55□□□□□ -0.4
SFXN1-211ENST00000515736 PTGER2P43116 358 aa12.55□□□□□ -0.4
SFXN1-211ENST00000515736 BOLA1Q9Y3E2 137 aa12.55□□□□□ -0.4
SFXN1-211ENST00000515736 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
SFXN1-211ENST00000515736 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
SFXN1-211ENST00000515736 VPS8Q8N3P4 1428 aa12.54□□□□□ -0.4
SFXN1-211ENST00000515736 GALR2O43603 387 aaPredicted RBP12.53□□□□□ -0.4
SFXN1-211ENST00000515736 FECHP22830 423 aa12.53□□□□□ -0.4
SFXN1-211ENST00000515736 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
SFXN1-211ENST00000515736 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
SFXN1-211ENST00000515736 FLIIQ13045 1269 aa12.51□□□□□ -0.41
SFXN1-211ENST00000515736 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
SFXN1-211ENST00000515736 GOPCQ9HD26 462 aa12.51□□□□□ -0.41
SFXN1-211ENST00000515736 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
SFXN1-211ENST00000515736 OCEL1Q9H607 264 aa12.5□□□□□ -0.41
SFXN1-211ENST00000515736 C1orf115Q9H7X2 142 aa12.5□□□□□ -0.41
SFXN1-211ENST00000515736 ABCC2Q92887 1545 aa12.5□□□□□ -0.41
SFXN1-211ENST00000515736 DDX12PQ92771 950 aa12.49□□□□□ -0.41
SFXN1-211ENST00000515736 G3V3G9 751 aa12.48□□□□□ -0.41
SFXN1-211ENST00000515736 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
SFXN1-211ENST00000515736 ASXL2Q76L83 1435 aa12.46□□□□□ -0.41
SFXN1-211ENST00000515736 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
SFXN1-211ENST00000515736 TTLL12Q14166 644 aaPredicted RBP12.46□□□□□ -0.41
SFXN1-211ENST00000515736 PODXL2Q9NZ53 605 aa12.46□□□□□ -0.41
SFXN1-211ENST00000515736 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.42
SFXN1-211ENST00000515736 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
SFXN1-211ENST00000515736 ONECUT3O60422 494 aaPredicted RBP12.45□□□□□ -0.42
SFXN1-211ENST00000515736 PTGDRQ13258 359 aa12.45□□□□□ -0.42
SFXN1-211ENST00000515736 IER5LQ5T953 404 aa12.45□□□□□ -0.42
SFXN1-211ENST00000515736 UHRF1BP1LA0JNW5 1464 aa12.45□□□□□ -0.42
SFXN1-211ENST00000515736 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
SFXN1-211ENST00000515736 GLI2P10070 1586 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms