RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 SLAIN1Q8ND83 568 aa7.9□□□□□ -1.14
HERC6-208ENST00000515365 REPIN1Q9BWE0 567 aaKnown RBP7.9□□□□□ -1.14
HERC6-208ENST00000515365 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
HERC6-208ENST00000515365 TSR1Q2NL82 804 aaKnown RBP7.89□□□□□ -1.15
HERC6-208ENST00000515365 HOMEZQ8IX15 550 aa7.89□□□□□ -1.15
HERC6-208ENST00000515365 RBM33Q96EV2 1170 aaKnown RBP7.89□□□□□ -1.15
HERC6-208ENST00000515365 TMUB1Q9BVT8 246 aa7.89□□□□□ -1.15
HERC6-208ENST00000515365 FBXW7Q969H0 707 aa7.88□□□□□ -1.15
HERC6-208ENST00000515365 JPH4Q96JJ6 628 aa7.88□□□□□ -1.15
HERC6-208ENST00000515365 CLCN1P35523 988 aa7.87□□□□□ -1.15
HERC6-208ENST00000515365 PHOX2BQ99453 314 aa7.86□□□□□ -1.15
HERC6-208ENST00000515365 GPCPD1Q9NPB8 672 aa7.86□□□□□ -1.15
HERC6-208ENST00000515365 FOSBP53539 338 aa7.85□□□□□ -1.15
HERC6-208ENST00000515365 MDM2Q00987 491 aaPredicted RBP7.85□□□□□ -1.15
HERC6-208ENST00000515365 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
HERC6-208ENST00000515365 POTEHQ6S545 545 aa7.84□□□□□ -1.15
HERC6-208ENST00000515365 FLIIQ13045 1269 aa7.83□□□□□ -1.16
HERC6-208ENST00000515365 SH3D19Q5HYK7 790 aa7.83□□□□□ -1.16
HERC6-208ENST00000515365 CERKQ8TCT0 537 aa7.83□□□□□ -1.16
HERC6-208ENST00000515365 PCMTD1Q96MG8 357 aaPredicted RBP7.83□□□□□ -1.16
HERC6-208ENST00000515365 ONECUT3O60422 494 aaPredicted RBP7.82□□□□□ -1.16
HERC6-208ENST00000515365 OATP04181 439 aa7.82□□□□□ -1.16
HERC6-208ENST00000515365 C6orf132Q5T0Z8 1188 aa7.82□□□□□ -1.16
HERC6-208ENST00000515365 METTL3Q86U44 580 aaKnown RBP7.82□□□□□ -1.16
HERC6-208ENST00000515365 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
HERC6-208ENST00000515365 SSTR3P32745 418 aaPredicted RBP7.81□□□□□ -1.16
HERC6-208ENST00000515365 PADI6Q6TGC4 694 aa7.81□□□□□ -1.16
HERC6-208ENST00000515365 ZDHHC16Q969W1 377 aa7.81□□□□□ -1.16
HERC6-208ENST00000515365 RBM27Q9P2N5 1060 aaKnown RBP7.81□□□□□ -1.16
HERC6-208ENST00000515365 ADGRG1Q9Y653 693 aa7.81□□□□□ -1.16
HERC6-208ENST00000515365 FAM161AQ3B820 660 aa7.8□□□□□ -1.16
HERC6-208ENST00000515365 ZNF454Q8N9F8 522 aa7.8□□□□□ -1.16
HERC6-208ENST00000515365 SP7Q8TDD2 431 aaPredicted RBP7.8□□□□□ -1.16
HERC6-208ENST00000515365 FAM217BQ9NTX9 383 aaPredicted RBP7.8□□□□□ -1.16
HERC6-208ENST00000515365 PXYLP1Q8TE99 480 aa7.79□□□□□ -1.16
HERC6-208ENST00000515365 NUDT7P0C024 238 aa7.78□□□□□ -1.16
HERC6-208ENST00000515365 HOXB3P14651 431 aaPredicted RBP7.78□□□□□ -1.16
HERC6-208ENST00000515365 SKIV2LQ15477 1246 aaKnown RBP7.78□□□□□ -1.16
HERC6-208ENST00000515365 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
HERC6-208ENST00000515365 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
HERC6-208ENST00000515365 ADAM33Q9BZ11 813 aa7.78□□□□□ -1.16
HERC6-208ENST00000515365 ARSIQ5FYB1 569 aa7.77□□□□□ -1.17
HERC6-208ENST00000515365 NLRP7Q8WX94 980 aa7.77□□□□□ -1.17
HERC6-208ENST00000515365 KHSRPQ92945 711 aaKnown RBP eCLIP7.77□□□□□ -1.17
HERC6-208ENST00000515365 ZSWIM6Q9HCJ5 1215 aa7.77□□□□□ -1.17
HERC6-208ENST00000515365 POTEJP0CG39 1038 aa7.76□□□□□ -1.17
HERC6-208ENST00000515365 PRSS12P56730 875 aa7.76□□□□□ -1.17
HERC6-208ENST00000515365 GPR153Q6NV75 609 aa7.75□□□□□ -1.17
HERC6-208ENST00000515365 RIMBP2O15034 1052 aa7.74□□□□□ -1.17
HERC6-208ENST00000515365 CDCA7LQ96GN5 454 aa7.74□□□□□ -1.17
HERC6-208ENST00000515365 C1orf115Q9H7X2 142 aa7.74□□□□□ -1.17
HERC6-208ENST00000515365 MCM6Q14566 821 aa7.73□□□□□ -1.17
HERC6-208ENST00000515365 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
HERC6-208ENST00000515365 RBM46Q8TBY0 533 aaKnown RBP7.73□□□□□ -1.17
HERC6-208ENST00000515365 A6NJR5 290 aa7.72□□□□□ -1.17
HERC6-208ENST00000515365 MYSM1Q5VVJ2 828 aa7.72□□□□□ -1.17
HERC6-208ENST00000515365 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.71□□□□□ -1.18
HERC6-208ENST00000515365 POLR3EQ9NVU0 708 aa7.71□□□□□ -1.18
HERC6-208ENST00000515365 FAM198AQ9UFP1 575 aa7.71□□□□□ -1.18
HERC6-208ENST00000515365 LHX6Q9UPM6 363 aa7.71□□□□□ -1.18
HERC6-208ENST00000515365 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.7□□□□□ -1.18
HERC6-208ENST00000515365 POTEB2H3BUK9 544 aa7.7□□□□□ -1.18
HERC6-208ENST00000515365 COL9A1P20849 921 aa7.7□□□□□ -1.18
HERC6-208ENST00000515365 PPP4R3BQ5MIZ7 849 aa7.7□□□□□ -1.18
HERC6-208ENST00000515365 CLUAP1Q96AJ1 413 aa7.7□□□□□ -1.18
HERC6-208ENST00000515365 BCL2L12Q9HB09 334 aa7.7□□□□□ -1.18
HERC6-208ENST00000515365 UBTFP17480 764 aaKnown RBP7.69□□□□□ -1.18
HERC6-208ENST00000515365 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
HERC6-208ENST00000515365 DIXDC1Q155Q3 683 aa7.69□□□□□ -1.18
HERC6-208ENST00000515365 ZNF710Q8N1W2 664 aa7.69□□□□□ -1.18
HERC6-208ENST00000515365 EYA1Q99502 592 aa7.69□□□□□ -1.18
HERC6-208ENST00000515365 TBC1D2Q9BYX2 928 aa7.69□□□□□ -1.18
HERC6-208ENST00000515365 PSDA5PKW4 1024 aaPredicted RBP7.68□□□□□ -1.18
HERC6-208ENST00000515365 RCCD1A6NED2 376 aa7.68□□□□□ -1.18
HERC6-208ENST00000515365 ARID3CA6NKF2 412 aa7.68□□□□□ -1.18
HERC6-208ENST00000515365 PPP1R3GB7ZBB8 358 aa7.68□□□□□ -1.18
HERC6-208ENST00000515365 APBB1O00213 710 aa7.68□□□□□ -1.18
HERC6-208ENST00000515365 TRAK2O60296 914 aa7.67□□□□□ -1.18
HERC6-208ENST00000515365 SCUBE2Q9NQ36 999 aa7.67□□□□□ -1.18
HERC6-208ENST00000515365 TSKSQ9UJT2 592 aa7.67□□□□□ -1.18
HERC6-208ENST00000515365 ATP1B4Q9UN42 357 aaPredicted RBP7.67□□□□□ -1.18
HERC6-208ENST00000515365 CD46P15529 392 aa7.66□□□□□ -1.18
HERC6-208ENST00000515365 MAMSTRQ6ZN01 415 aa7.66□□□□□ -1.18
HERC6-208ENST00000515365 C3orf80F5H4A9 247 aa7.65□□□□□ -1.18
HERC6-208ENST00000515365 PTPREP23469 700 aa7.65□□□□□ -1.18
HERC6-208ENST00000515365 SPIRE2Q8WWL2 714 aa7.65□□□□□ -1.18
HERC6-208ENST00000515365 ARID3AQ99856 593 aa7.65□□□□□ -1.18
HERC6-208ENST00000515365 LIMD1Q9UGP4 676 aa7.65□□□□□ -1.18
HERC6-208ENST00000515365 SPDYE5A6NIY4 337 aa7.64□□□□□ -1.19
HERC6-208ENST00000515365 DNAJB2P25686 324 aa7.64□□□□□ -1.19
HERC6-208ENST00000515365 RFC5P40937 340 aa7.64□□□□□ -1.19
HERC6-208ENST00000515365 FBXO31Q5XUX0 539 aaPredicted RBP7.64□□□□□ -1.19
HERC6-208ENST00000515365 NUDT18Q6ZVK8 323 aa7.64□□□□□ -1.19
HERC6-208ENST00000515365 TRIM6-TRIM34B2RNG4 842 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 NBPF26B4DH59 902 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 TUSC1Q2TAM9 212 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 PPP2R2DQ66LE6 453 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 RIC3Q7Z5B4 369 aa7.63□□□□□ -1.19
HERC6-208ENST00000515365 PROSER2Q86WR7 435 aaPredicted RBP7.63□□□□□ -1.19
HERC6-208ENST00000515365 SULF1Q8IWU6 871 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms