RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-223	ENST00000515143	NCOA1	Q15788	1441 aa		11.39	□□□□□ -0.59
SPOCK3-223	ENST00000515143	CERK	Q8TCT0	537 aa		11.39	□□□□□ -0.59
SPOCK3-223	ENST00000515143	MSH5	O43196	834 aa		11.38	□□□□□ -0.59
SPOCK3-223	ENST00000515143	PLA2R1	Q13018	1463 aa		11.38	□□□□□ -0.59
SPOCK3-223	ENST00000515143	PKD2	Q13563	968 aa		11.37	□□□□□ -0.59
SPOCK3-223	ENST00000515143	TCOF1	Q13428	1488 aa	Known RBP	11.37	□□□□□ -0.59
SPOCK3-223	ENST00000515143	APLP2	Q06481	763 aa		11.36	□□□□□ -0.59
SPOCK3-223	ENST00000515143	PZP	P20742	1482 aa		11.36	□□□□□ -0.59
SPOCK3-223	ENST00000515143	WASHC2C	Q9Y4E1	1318 aa		11.35	□□□□□ -0.59
SPOCK3-223	ENST00000515143	ABCC5	O15440	1437 aa		11.35	□□□□□ -0.59
SPOCK3-223	ENST00000515143	KDM5D	Q9BY66	1539 aa		11.35	□□□□□ -0.59
SPOCK3-223	ENST00000515143	SHANK2	Q9UPX8	1470 aa		11.35	□□□□□ -0.59
SPOCK3-223	ENST00000515143	CLTC	Q00610	1675 aa	Known RBP	11.35	□□□□□ -0.59
SPOCK3-223	ENST00000515143	FGD6	Q6ZV73	1430 aa		11.34	□□□□□ -0.59
SPOCK3-223	ENST00000515143	A2ML1	A8K2U0	1454 aa		11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	RNF17	Q9BXT8	1623 aa	Known RBP	11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	DUOX2	Q9NRD8	1548 aa		11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ARHGAP31	Q2M1Z3	1444 aa		11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ZNF142	P52746	1687 aa	Predicted RBP	11.33	□□□□□ -0.6
SPOCK3-223	ENST00000515143	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.32	□□□□□ -0.6
SPOCK3-223	ENST00000515143	IQSEC2	Q5JU85	1478 aa		11.32	□□□□□ -0.6
SPOCK3-223	ENST00000515143	CAMSAP1	Q5T5Y3	1602 aa		11.31	□□□□□ -0.6
SPOCK3-223	ENST00000515143	TNR	Q92752	1358 aa		11.31	□□□□□ -0.6
SPOCK3-223	ENST00000515143	NLRP1	Q9C000	1473 aa		11.31	□□□□□ -0.6
SPOCK3-223	ENST00000515143	LTBP4	Q8N2S1	1624 aa		11.31	□□□□□ -0.6
SPOCK3-223	ENST00000515143	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	11.3	□□□□□ -0.6
SPOCK3-223	ENST00000515143	DAPK1	P53355	1430 aa		11.3	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ERBIN	Q96RT1	1412 aa		11.3	□□□□□ -0.6
SPOCK3-223	ENST00000515143	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.3	□□□□□ -0.6
SPOCK3-223	ENST00000515143	PTPN23	Q9H3S7	1636 aa		11.3	□□□□□ -0.6
SPOCK3-223	ENST00000515143	KIF15	Q9NS87	1388 aa		11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	DNMT1	P26358	1616 aa	Known RBP	11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	MROH1	Q8NDA8	1641 aa		11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	MYO3A	Q8NEV4	1616 aa		11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	NCKAP5L	Q9HCH0	1330 aa		11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ABCC3	O15438	1527 aa		11.29	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ADGRL2	O95490	1459 aa		11.28	□□□□□ -0.6
SPOCK3-223	ENST00000515143	SPATA31D1	Q6ZQQ2	1576 aa		11.28	□□□□□ -0.6
SPOCK3-223	ENST00000515143	ANKRD30A	Q9BXX3	1397 aa		11.28	□□□□□ -0.6
SPOCK3-223	ENST00000515143	MED14	O60244	1454 aa		11.27	□□□□□ -0.6
SPOCK3-223	ENST00000515143	RRP7BP	Q9NSQ0	103 aa		11.27	□□□□□ -0.61
SPOCK3-223	ENST00000515143	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
SPOCK3-223	ENST00000515143	ZC3H13	Q5T200	1668 aa	Known RBP	11.27	□□□□□ -0.61
SPOCK3-223	ENST00000515143	ANKLE2	Q86XL3	938 aa		11.26	□□□□□ -0.61
SPOCK3-223	ENST00000515143	PRDM15	P57071	1507 aa	Predicted RBP	11.25	□□□□□ -0.61
SPOCK3-223	ENST00000515143	LMTK2	Q8IWU2	1503 aa		11.25	□□□□□ -0.61
SPOCK3-223	ENST00000515143	VWDE	Q8N2E2	1590 aa		11.25	□□□□□ -0.61
SPOCK3-223	ENST00000515143	ERVK-7	P63135	1459 aa		11.25	□□□□□ -0.61
SPOCK3-223	ENST00000515143	DEPDC5	O75140	1603 aa		11.24	□□□□□ -0.61
SPOCK3-223	ENST00000515143	CROCC2	H7BZ55	1655 aa		11.24	□□□□□ -0.61
SPOCK3-223	ENST00000515143	ROCK1	Q13464	1354 aa		11.22	□□□□□ -0.61
SPOCK3-223	ENST00000515143	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.22	□□□□□ -0.61
SPOCK3-223	ENST00000515143	UGGT1	Q9NYU2	1555 aa		11.22	□□□□□ -0.61
SPOCK3-223	ENST00000515143	KANK1	Q14678	1352 aa		11.21	□□□□□ -0.61
SPOCK3-223	ENST00000515143	NEURL4	Q96JN8	1562 aa		11.2	□□□□□ -0.62
SPOCK3-223	ENST00000515143	ARHGAP23	Q9P227	1491 aa		11.2	□□□□□ -0.62
SPOCK3-223	ENST00000515143	NOS1	P29475	1434 aa		11.2	□□□□□ -0.62
SPOCK3-223	ENST00000515143	CHIC2	Q9UKJ5	165 aa		11.2	□□□□□ -0.62
SPOCK3-223	ENST00000515143	ANKRD50	Q9ULJ7	1429 aa		11.19	□□□□□ -0.62
SPOCK3-223	ENST00000515143	SLC52A1	Q9NWF4	448 aa		11.19	□□□□□ -0.62
SPOCK3-223	ENST00000515143	SLIT1	O75093	1534 aa		11.19	□□□□□ -0.62
SPOCK3-223	ENST00000515143	IDI1	Q13907	227 aa		11.18	□□□□□ -0.62
SPOCK3-223	ENST00000515143	RPRD2	Q5VT52	1461 aa	Known RBP	11.18	□□□□□ -0.62
SPOCK3-223	ENST00000515143	NPHP4	O75161	1426 aa	Predicted RBP	11.18	□□□□□ -0.62
SPOCK3-223	ENST00000515143	CPS1	P31327	1500 aa		11.17	□□□□□ -0.62
SPOCK3-223	ENST00000515143	KDM5A	P29375	1690 aa	Known RBP	11.17	□□□□□ -0.62
SPOCK3-223	ENST00000515143	LTK	P29376	864 aa		11.16	□□□□□ -0.62
SPOCK3-223	ENST00000515143	FAM50A	Q14320	339 aa	Known RBP	11.16	□□□□□ -0.62
SPOCK3-223	ENST00000515143	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
SPOCK3-223	ENST00000515143	CEP152	O94986	1710 aa		11.15	□□□□□ -0.63
SPOCK3-223	ENST00000515143	POLR1A	O95602	1720 aa	Predicted RBP	11.15	□□□□□ -0.63
SPOCK3-223	ENST00000515143	UBR1	Q8IWV7	1749 aa		11.15	□□□□□ -0.63
SPOCK3-223	ENST00000515143	TMEM2	Q9UHN6	1383 aa		11.15	□□□□□ -0.63
SPOCK3-223	ENST00000515143	TXNDC2	Q86VQ3	553 aa		11.14	□□□□□ -0.63
SPOCK3-223	ENST00000515143	SCAF11	Q99590	1463 aa	Known RBP	11.13	□□□□□ -0.63
SPOCK3-223	ENST00000515143	EFCAB6	Q5THR3	1501 aa		11.13	□□□□□ -0.63
SPOCK3-223	ENST00000515143	EID1	Q9Y6B2	187 aa		11.12	□□□□□ -0.63
SPOCK3-223	ENST00000515143	RRBP1	Q9P2E9	1410 aa	Known RBP	11.11	□□□□□ -0.63
SPOCK3-223	ENST00000515143	UBAP1L	F5GYI3	381 aa		11.11	□□□□□ -0.63
SPOCK3-223	ENST00000515143	TOM1	O60784	492 aa		11.11	□□□□□ -0.63
SPOCK3-223	ENST00000515143	SYNM	O15061	1565 aa		11.11	□□□□□ -0.63
SPOCK3-223	ENST00000515143	TET3	O43151	1660 aa		11.11	□□□□□ -0.63
SPOCK3-223	ENST00000515143	CFAP65	Q6ZU64	1925 aa	Known RBP	11.1	□□□□□ -0.63
SPOCK3-223	ENST00000515143	IQGAP1	P46940	1657 aa		11.1	□□□□□ -0.63
SPOCK3-223	ENST00000515143	UNC13B	O14795	1591 aa		11.09	□□□□□ -0.63
SPOCK3-223	ENST00000515143	HDGF	P51858	240 aa	Known RBP	11.09	□□□□□ -0.63
SPOCK3-223	ENST00000515143	KCNA6	P17658	529 aa		11.08	□□□□□ -0.64
SPOCK3-223	ENST00000515143	PIK3C2B	O00750	1634 aa		11.08	□□□□□ -0.64
SPOCK3-223	ENST00000515143	LRRC7	Q96NW7	1537 aa		11.08	□□□□□ -0.64
SPOCK3-223	ENST00000515143	ZFYVE9	O95405	1425 aa		11.07	□□□□□ -0.64
SPOCK3-223	ENST00000515143	PPP4R3CP	Q6ZMV5	832 aa		11.06	□□□□□ -0.64
SPOCK3-223	ENST00000515143	STAG3	Q9UJ98	1225 aa		11.06	□□□□□ -0.64
SPOCK3-223	ENST00000515143	TBX22	Q9Y458	520 aa		11.06	□□□□□ -0.64
SPOCK3-223	ENST00000515143	ALK	Q9UM73	1620 aa		11.06	□□□□□ -0.64
SPOCK3-223	ENST00000515143	NUP155	O75694	1391 aa		11.05	□□□□□ -0.64
SPOCK3-223	ENST00000515143	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.05	□□□□□ -0.64
SPOCK3-223	ENST00000515143	STRCP1	A6NGW2	1772 aa		11.05	□□□□□ -0.64
SPOCK3-223	ENST00000515143	IQGAP3	Q86VI3	1631 aa		11.05	□□□□□ -0.64
SPOCK3-223	ENST00000515143	ADGRB3	O60242	1522 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms