RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 DNMT1P26358 1616 aaKnown RBP37.98■■■■□ 3.67
SNF8-213ENST00000514929 WASHC2CQ9Y4E1 1318 aa37.98■■■■□ 3.67
SNF8-213ENST00000514929 EIF2AK4Q9P2K8 1649 aaKnown RBP37.95■■■■□ 3.67
SNF8-213ENST00000514929 DUOX2Q9NRD8 1548 aa37.95■■■■□ 3.67
SNF8-213ENST00000514929 RNF17Q9BXT8 1623 aaKnown RBP37.93■■■■□ 3.66
SNF8-213ENST00000514929 KIF15Q9NS87 1388 aa37.93■■■■□ 3.66
SNF8-213ENST00000514929 ILDR1Q86SU0 546 aaPredicted RBP37.91■■■■□ 3.66
SNF8-213ENST00000514929 STRCQ7RTU9 1775 aa37.91■■■■□ 3.66
SNF8-213ENST00000514929 MYO3AQ8NEV4 1616 aa37.9■■■■□ 3.66
SNF8-213ENST00000514929 RRP7BPQ9NSQ0 103 aa37.9■■■■□ 3.66
SNF8-213ENST00000514929 FAM50AQ14320 339 aaKnown RBP37.89■■■■□ 3.66
SNF8-213ENST00000514929 DMRT2Q9Y5R5 561 aa37.89■■■■□ 3.66
SNF8-213ENST00000514929 PZPP20742 1482 aa37.86■■■■□ 3.65
SNF8-213ENST00000514929 CHIC2Q9UKJ5 165 aa37.86■■■■□ 3.65
SNF8-213ENST00000514929 ZNF142P52746 1687 aaPredicted RBP37.83■■■■□ 3.65
SNF8-213ENST00000514929 FBXO31Q5XUX0 539 aaPredicted RBP37.83■■■■□ 3.65
SNF8-213ENST00000514929 CEP170BQ9Y4F5 1589 aaPredicted RBP37.83■■■■□ 3.65
SNF8-213ENST00000514929 ANKRD30AQ9BXX3 1397 aa37.82■■■■□ 3.65
SNF8-213ENST00000514929 ERBINQ96RT1 1412 aa37.82■■■■□ 3.64
SNF8-213ENST00000514929 ZC3H13Q5T200 1668 aaKnown RBP37.82■■■■□ 3.64
SNF8-213ENST00000514929 CAMSAP1Q5T5Y3 1602 aa37.81■■■■□ 3.64
SNF8-213ENST00000514929 ABCC3O15438 1527 aa37.81■■■■□ 3.64
SNF8-213ENST00000514929 NCOA1Q15788 1441 aa37.8■■■■□ 3.64
SNF8-213ENST00000514929 TNRQ92752 1358 aa37.8■■■■□ 3.64
SNF8-213ENST00000514929 MROH1Q8NDA8 1641 aa37.79■■■■□ 3.64
SNF8-213ENST00000514929 A2ML1A8K2U0 1454 aa37.74■■■■□ 3.63
SNF8-213ENST00000514929 PTPRTO14522 1441 aa37.74■■■■□ 3.63
SNF8-213ENST00000514929 PPARGC1BQ86YN6 1023 aaKnown RBP37.74■■■■□ 3.63
SNF8-213ENST00000514929 CEP152O94986 1710 aa37.71■■■■□ 3.63
SNF8-213ENST00000514929 ADGRL2O95490 1459 aa37.71■■■■□ 3.63
SNF8-213ENST00000514929 PRDM15P57071 1507 aaPredicted RBP37.7■■■■□ 3.63
SNF8-213ENST00000514929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.69■■■■□ 3.621e-6■■■■□ 19.4
SNF8-213ENST00000514929 PLA2R1Q13018 1463 aa37.68■■■■□ 3.62
SNF8-213ENST00000514929 FBXO41Q8TF61 875 aa37.67■■■■□ 3.62
SNF8-213ENST00000514929 NCKAP5LQ9HCH0 1330 aa37.65■■■■□ 3.62
SNF8-213ENST00000514929 DEPDC5O75140 1603 aa37.65■■■■□ 3.62
SNF8-213ENST00000514929 KANK1Q14678 1352 aa37.64■■■■□ 3.62
SNF8-213ENST00000514929 NLRP1Q9C000 1473 aa37.63■■■■□ 3.61
SNF8-213ENST00000514929 PKD2Q13563 968 aa37.62■■■■□ 3.61
SNF8-213ENST00000514929 CERKQ8TCT0 537 aa37.62■■■■□ 3.61
SNF8-213ENST00000514929 SPATA31D1Q6ZQQ2 1576 aa37.61■■■■□ 3.61
SNF8-213ENST00000514929 ERVK-7P63135 1459 aa37.6■■■■□ 3.61
SNF8-213ENST00000514929 ARHGAP31Q2M1Z3 1444 aa37.54■■■■□ 3.6
SNF8-213ENST00000514929 ANKRD50Q9ULJ7 1429 aa37.54■■■■□ 3.6
SNF8-213ENST00000514929 UGGT1Q9NYU2 1555 aa37.54■■■■□ 3.6
SNF8-213ENST00000514929 THEMISQ8N1K5 641 aaPredicted RBP37.53■■■■□ 3.6
SNF8-213ENST00000514929 CFAP65Q6ZU64 1925 aaKnown RBP37.53■■■■□ 3.6
SNF8-213ENST00000514929 ITGAEP38570 1179 aa37.5■■■■□ 3.59
SNF8-213ENST00000514929 VWDEQ8N2E2 1590 aa37.48■■■■□ 3.59
SNF8-213ENST00000514929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.48■■■■□ 3.593e-6■□□□□ 10.3
SNF8-213ENST00000514929 LMTK2Q8IWU2 1503 aa37.47■■■■□ 3.59
SNF8-213ENST00000514929 ROCK1Q13464 1354 aa37.46■■■■□ 3.59
SNF8-213ENST00000514929 POLR1AO95602 1720 aaPredicted RBP37.45■■■■□ 3.59
SNF8-213ENST00000514929 ANKLE2Q86XL3 938 aa37.43■■■■□ 3.58
SNF8-213ENST00000514929 LTBP4Q8N2S1 1624 aa37.41■■■■□ 3.58
SNF8-213ENST00000514929 NEURL4Q96JN8 1562 aa37.38■■■■□ 3.58
SNF8-213ENST00000514929 EFCAB6Q5THR3 1501 aa37.37■■■■□ 3.57
SNF8-213ENST00000514929 ZNF335Q9H4Z2 1342 aaPredicted RBP37.36■■■■□ 3.57
SNF8-213ENST00000514929 UBR1Q8IWV7 1749 aa37.34■■■■□ 3.57
SNF8-213ENST00000514929 RRBP1Q9P2E9 1410 aaKnown RBP37.34■■■■□ 3.57
SNF8-213ENST00000514929 UNC13BO14795 1591 aa37.32■■■■□ 3.56
SNF8-213ENST00000514929 NPHP4O75161 1426 aaPredicted RBP37.27■■■■□ 3.56
SNF8-213ENST00000514929 MED14O60244 1454 aa37.27■■■■□ 3.56
SNF8-213ENST00000514929 PIK3C2BO00750 1634 aa37.27■■■■□ 3.56
SNF8-213ENST00000514929 TET3O43151 1660 aa37.26■■■■□ 3.56
SNF8-213ENST00000514929 STAG3Q9UJ98 1225 aa37.26■■■■□ 3.56
SNF8-213ENST00000514929 NOS1P29475 1434 aa37.25■■■■□ 3.55
SNF8-213ENST00000514929 RPRD2Q5VT52 1461 aaKnown RBP37.25■■■■□ 3.55
SNF8-213ENST00000514929 SYNMO15061 1565 aa37.25■■■■□ 3.55
SNF8-213ENST00000514929 IQSEC2Q5JU85 1478 aa37.24■■■■□ 3.55
SNF8-213ENST00000514929 IDI1Q13907 227 aa37.22■■■■□ 3.55
SNF8-213ENST00000514929 IQGAP1P46940 1657 aa37.21■■■■□ 3.55
SNF8-213ENST00000514929 GCC2Q8IWJ2 1684 aa37.21■■■■□ 3.55
SNF8-213ENST00000514929 SLIT1O75093 1534 aa37.19■■■■□ 3.54
SNF8-213ENST00000514929 SCAF11Q99590 1463 aaKnown RBP37.19■■■■□ 3.54
SNF8-213ENST00000514929 ARHGAP23Q9P227 1491 aa37.18■■■■□ 3.54
SNF8-213ENST00000514929 TXNDC2Q86VQ3 553 aa37.17■■■■□ 3.54
SNF8-213ENST00000514929 IQGAP3Q86VI3 1631 aa37.17■■■■□ 3.54
SNF8-213ENST00000514929 NUP155O75694 1391 aa37.17■■■■□ 3.54
SNF8-213ENST00000514929 SLC52A1Q9NWF4 448 aa37.16■■■■□ 3.54
SNF8-213ENST00000514929 KDM5AP29375 1690 aaKnown RBP37.15■■■■□ 3.54
SNF8-213ENST00000514929 EID1Q9Y6B2 187 aa37.15■■■■□ 3.54
SNF8-213ENST00000514929 LTKP29376 864 aa37.13■■■■□ 3.53
SNF8-213ENST00000514929 TMEM2Q9UHN6 1383 aa37.13■■■■□ 3.53
SNF8-213ENST00000514929 ADGRB3O60242 1522 aa37.1■■■■□ 3.53
SNF8-213ENST00000514929 E9PCH4 1651 aa37.1■■■■□ 3.53
SNF8-213ENST00000514929 CPS1P31327 1500 aa37.1■■■■□ 3.53
SNF8-213ENST00000514929 NAIPQ13075 1403 aa37.04■■■■□ 3.52
SNF8-213ENST00000514929 UBAP1LF5GYI3 381 aa37■■■■□ 3.51
SNF8-213ENST00000514929 CHGAP10645 457 aaKnown RBP36.95■■■■□ 3.51
SNF8-213ENST00000514929 HFM1A2PYH4 1435 aa36.94■■■■□ 3.5
SNF8-213ENST00000514929 TMEM131LA2VDJ0 1609 aa36.93■■■■□ 3.5
SNF8-213ENST00000514929 MYO5BQ9ULV0 1848 aa36.92■■■■□ 3.5
SNF8-213ENST00000514929 STRCP1A6NGW2 1772 aa36.92■■■■□ 3.5
SNF8-213ENST00000514929 HDGFP51858 240 aaKnown RBP36.87■■■■□ 3.49
SNF8-213ENST00000514929 BCANQ96GW7 911 aa36.87■■■■□ 3.49
SNF8-213ENST00000514929 ZFYVE9O95405 1425 aa36.86■■■■□ 3.49
SNF8-213ENST00000514929 RIMS2Q9UQ26 1411 aa36.86■■■■□ 3.49
SNF8-213ENST00000514929 PPP1R15AO75807 674 aaPredicted RBP36.85■■■■□ 3.49
SNF8-213ENST00000514929 TRIM52Q96A61 297 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms