RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 HECW2Q9P2P5 1572 aa10.86□□□□□ -0.67
SMAD1-213ENST00000514778 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
SMAD1-213ENST00000514778 RRBP1Q9P2E9 1410 aaKnown RBP10.85□□□□□ -0.67
SMAD1-213ENST00000514778 ARHGEF40Q8TER5 1519 aa10.85□□□□□ -0.67
SMAD1-213ENST00000514778 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
SMAD1-213ENST00000514778 ATP10AO60312 1499 aa10.85□□□□□ -0.67
SMAD1-213ENST00000514778 SHANK2Q9UPX8 1470 aa10.85□□□□□ -0.67
SMAD1-213ENST00000514778 REREQ9P2R6 1566 aa10.85□□□□□ -0.67
SMAD1-213ENST00000514778 MAST1Q9Y2H9 1570 aa10.84□□□□□ -0.67
SMAD1-213ENST00000514778 INO80Q9ULG1 1556 aaPredicted RBP10.83□□□□□ -0.68
SMAD1-213ENST00000514778 ATP7AQ04656 1500 aa10.83□□□□□ -0.68
SMAD1-213ENST00000514778 ABCC5O15440 1437 aa10.83□□□□□ -0.68
SMAD1-213ENST00000514778 DAPK1P53355 1430 aa10.83□□□□□ -0.68
SMAD1-213ENST00000514778 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
SMAD1-213ENST00000514778 PPARGC1BQ86YN6 1023 aaKnown RBP10.82□□□□□ -0.68
SMAD1-213ENST00000514778 DNMT1P26358 1616 aaKnown RBP10.82□□□□□ -0.68
SMAD1-213ENST00000514778 C9orf84Q5VXU9 1444 aa10.82□□□□□ -0.68
SMAD1-213ENST00000514778 YEATS2Q9ULM3 1422 aa10.82□□□□□ -0.68
SMAD1-213ENST00000514778 KIDINS220Q9ULH0 1771 aa10.81□□□□□ -0.68
SMAD1-213ENST00000514778 FAM50AQ14320 339 aaKnown RBP10.81□□□□□ -0.68
SMAD1-213ENST00000514778 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
SMAD1-213ENST00000514778 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
SMAD1-213ENST00000514778 AGLP35573 1532 aa10.8□□□□□ -0.68
SMAD1-213ENST00000514778 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
SMAD1-213ENST00000514778 PLXNC1O60486 1568 aa10.79□□□□□ -0.68
SMAD1-213ENST00000514778 ADGRL2O95490 1459 aa10.79□□□□□ -0.68
SMAD1-213ENST00000514778 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
SMAD1-213ENST00000514778 ROCK1Q13464 1354 aa10.78□□□□□ -0.68
SMAD1-213ENST00000514778 DHX29Q7Z478 1369 aaKnown RBP10.78□□□□□ -0.68
SMAD1-213ENST00000514778 ANKRD30AQ9BXX3 1397 aa10.78□□□□□ -0.68
SMAD1-213ENST00000514778 ABCA6Q8N139 1617 aa10.78□□□□□ -0.68
SMAD1-213ENST00000514778 A2MP01023 1474 aa10.78□□□□□ -0.68
SMAD1-213ENST00000514778 CROCC2H7BZ55 1655 aa10.78□□□□□ -0.68
SMAD1-213ENST00000514778 NCOA1Q15788 1441 aa10.76□□□□□ -0.69
SMAD1-213ENST00000514778 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
SMAD1-213ENST00000514778 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
SMAD1-213ENST00000514778 KIF15Q9NS87 1388 aa10.75□□□□□ -0.69
SMAD1-213ENST00000514778 ERBINQ96RT1 1412 aa10.75□□□□□ -0.69
SMAD1-213ENST00000514778 BCORL1Q5H9F3 1711 aa10.74□□□□□ -0.69
SMAD1-213ENST00000514778 ARID4BQ4LE39 1312 aaPredicted RBP10.74□□□□□ -0.69
SMAD1-213ENST00000514778 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
SMAD1-213ENST00000514778 PTPRKQ15262 1439 aa10.73□□□□□ -0.69
SMAD1-213ENST00000514778 FAM135AQ9P2D6 1515 aa10.73□□□□□ -0.69
SMAD1-213ENST00000514778 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
SMAD1-213ENST00000514778 RRP7BPQ9NSQ0 103 aa10.71□□□□□ -0.69
SMAD1-213ENST00000514778 CHIC2Q9UKJ5 165 aa10.71□□□□□ -0.69
SMAD1-213ENST00000514778 CNTLNQ9NXG0 1405 aa10.7□□□□□ -0.7
SMAD1-213ENST00000514778 ADAMTSL3P82987 1691 aa10.69□□□□□ -0.7
SMAD1-213ENST00000514778 ANKRD50Q9ULJ7 1429 aa10.69□□□□□ -0.7
SMAD1-213ENST00000514778 KIF3BO15066 747 aa10.69□□□□□ -0.7
SMAD1-213ENST00000514778 SIGLEC1Q9BZZ2 1709 aa10.69□□□□□ -0.7
SMAD1-213ENST00000514778 HFM1A2PYH4 1435 aa10.68□□□□□ -0.7
SMAD1-213ENST00000514778 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
SMAD1-213ENST00000514778 RNF17Q9BXT8 1623 aaKnown RBP10.68□□□□□ -0.7
SMAD1-213ENST00000514778 ITGAEP38570 1179 aa10.67□□□□□ -0.7
SMAD1-213ENST00000514778 ESF1Q9H501 851 aaKnown RBP10.67□□□□□ -0.7
SMAD1-213ENST00000514778 GGT6Q6P531 493 aa10.66□□□□□ -0.7
SMAD1-213ENST00000514778 KDM5DQ9BY66 1539 aa10.66□□□□□ -0.7
SMAD1-213ENST00000514778 NAIPQ13075 1403 aa10.66□□□□□ -0.7
SMAD1-213ENST00000514778 DEPDC5O75140 1603 aa10.65□□□□□ -0.7
SMAD1-213ENST00000514778 KANK1Q14678 1352 aa10.65□□□□□ -0.71
SMAD1-213ENST00000514778 PRDM15P57071 1507 aaPredicted RBP10.64□□□□□ -0.71
SMAD1-213ENST00000514778 WASHC2CQ9Y4E1 1318 aa10.64□□□□□ -0.71
SMAD1-213ENST00000514778 PRKAR2AP13861 404 aaKnown RBP10.64□□□□□ -0.71
SMAD1-213ENST00000514778 MLECQ14165 292 aa10.64□□□□□ -0.71
SMAD1-213ENST00000514778 MROH2AA6NES4 1674 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
SMAD1-213ENST00000514778 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 PTPRMP28827 1452 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 MADDQ8WXG6 1647 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 HAX1O00165 279 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 HRCP23327 699 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 SP7Q8TDD2 431 aaPredicted RBP10.63□□□□□ -0.71
SMAD1-213ENST00000514778 LMTK2Q8IWU2 1503 aa10.63□□□□□ -0.71
SMAD1-213ENST00000514778 VWDEQ8N2E2 1590 aa10.62□□□□□ -0.71
SMAD1-213ENST00000514778 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
SMAD1-213ENST00000514778 ZMYM3Q14202 1370 aa10.62□□□□□ -0.71
SMAD1-213ENST00000514778 FER1L4A9Z1Z3 1794 aa10.62□□□□□ -0.71
SMAD1-213ENST00000514778 MROH1Q8NDA8 1641 aa10.62□□□□□ -0.71
SMAD1-213ENST00000514778 UNC13BO14795 1591 aa10.61□□□□□ -0.71
SMAD1-213ENST00000514778 ARHGAP31Q2M1Z3 1444 aa10.61□□□□□ -0.71
SMAD1-213ENST00000514778 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
SMAD1-213ENST00000514778 ABCC3O15438 1527 aa10.61□□□□□ -0.71
SMAD1-213ENST00000514778 NPATQ14207 1427 aa10.6□□□□□ -0.71
SMAD1-213ENST00000514778 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
SMAD1-213ENST00000514778 RIMS1Q86UR5 1692 aaKnown RBP10.59□□□□□ -0.71
SMAD1-213ENST00000514778 PZPP20742 1482 aa10.58□□□□□ -0.72
SMAD1-213ENST00000514778 RPRD2Q5VT52 1461 aaKnown RBP10.58□□□□□ -0.72
SMAD1-213ENST00000514778 NUP155O75694 1391 aa10.58□□□□□ -0.72
SMAD1-213ENST00000514778 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
SMAD1-213ENST00000514778 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
SMAD1-213ENST00000514778 IQGAP3Q86VI3 1631 aa10.57□□□□□ -0.72
SMAD1-213ENST00000514778 EFCAB6Q5THR3 1501 aa10.55□□□□□ -0.72
SMAD1-213ENST00000514778 C3P01024 1663 aa10.55□□□□□ -0.72
SMAD1-213ENST00000514778 CAMSAP1Q5T5Y3 1602 aa10.55□□□□□ -0.72
SMAD1-213ENST00000514778 TET3O43151 1660 aa10.54□□□□□ -0.72
SMAD1-213ENST00000514778 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
SMAD1-213ENST00000514778 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
SMAD1-213ENST00000514778 SPATA31D1Q6ZQQ2 1576 aa10.52□□□□□ -0.72
SMAD1-213ENST00000514778 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms