RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 MADDQ8WXG6 1647 aa17.27■□□□□ 0.36
UBE2D3-232ENST00000514755 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
UBE2D3-232ENST00000514755 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
UBE2D3-232ENST00000514755 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
UBE2D3-232ENST00000514755 INO80Q9ULG1 1556 aaPredicted RBP17.24■□□□□ 0.35
UBE2D3-232ENST00000514755 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
UBE2D3-232ENST00000514755 REREQ9P2R6 1566 aa17.23■□□□□ 0.35
UBE2D3-232ENST00000514755 PTPRMP28827 1452 aa17.22■□□□□ 0.35
UBE2D3-232ENST00000514755 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.35
UBE2D3-232ENST00000514755 MIA2Q96PC5 1412 aa17.21■□□□□ 0.34
UBE2D3-232ENST00000514755 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
UBE2D3-232ENST00000514755 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
UBE2D3-232ENST00000514755 AGLP35573 1532 aa17.17■□□□□ 0.34
UBE2D3-232ENST00000514755 FER1L4A9Z1Z3 1794 aa17.17■□□□□ 0.34
UBE2D3-232ENST00000514755 RTEL1-TNFRSF6BF6WH68 1400 aa17.16■□□□□ 0.34
UBE2D3-232ENST00000514755 PTPN23Q9H3S7 1636 aa17.16■□□□□ 0.34
UBE2D3-232ENST00000514755 PLXNC1O60486 1568 aa17.15■□□□□ 0.34
UBE2D3-232ENST00000514755 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
UBE2D3-232ENST00000514755 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-232ENST00000514755 A2MP01023 1474 aa17.15■□□□□ 0.34
UBE2D3-232ENST00000514755 FGD6Q6ZV73 1430 aa17.14■□□□□ 0.33
UBE2D3-232ENST00000514755 ADGBQ8N7X0 1667 aa17.13■□□□□ 0.33
UBE2D3-232ENST00000514755 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
UBE2D3-232ENST00000514755 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 CEBPAP49715 358 aaPredicted RBP17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 ABCC5O15440 1437 aa17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
UBE2D3-232ENST00000514755 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
UBE2D3-232ENST00000514755 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
UBE2D3-232ENST00000514755 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
UBE2D3-232ENST00000514755 DAPK1P53355 1430 aa17.06■□□□□ 0.32
UBE2D3-232ENST00000514755 GGT6Q6P531 493 aa17.06■□□□□ 0.32
UBE2D3-232ENST00000514755 DNMT1P26358 1616 aaKnown RBP17.06■□□□□ 0.32
UBE2D3-232ENST00000514755 C3P01024 1663 aa17.04■□□□□ 0.32
UBE2D3-232ENST00000514755 KIF3BO15066 747 aa17.03■□□□□ 0.32
UBE2D3-232ENST00000514755 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
UBE2D3-232ENST00000514755 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
UBE2D3-232ENST00000514755 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-232ENST00000514755 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
UBE2D3-232ENST00000514755 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
UBE2D3-232ENST00000514755 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
UBE2D3-232ENST00000514755 CNTLNQ9NXG0 1405 aa16.99■□□□□ 0.31
UBE2D3-232ENST00000514755 RRP7BPQ9NSQ0 103 aa16.99■□□□□ 0.31
UBE2D3-232ENST00000514755 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
UBE2D3-232ENST00000514755 KIF15Q9NS87 1388 aa16.98■□□□□ 0.31
UBE2D3-232ENST00000514755 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
UBE2D3-232ENST00000514755 PTPRKQ15262 1439 aa16.97■□□□□ 0.31
UBE2D3-232ENST00000514755 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
UBE2D3-232ENST00000514755 HSPA2P54652 639 aa16.96■□□□□ 0.31
UBE2D3-232ENST00000514755 EIF2AK4Q9P2K8 1649 aaKnown RBP16.95■□□□□ 0.3
UBE2D3-232ENST00000514755 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
UBE2D3-232ENST00000514755 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
UBE2D3-232ENST00000514755 NCOA1Q15788 1441 aa16.94■□□□□ 0.3
UBE2D3-232ENST00000514755 PREX1Q8TCU6 1659 aa16.94■□□□□ 0.3
UBE2D3-232ENST00000514755 ADGRL2O95490 1459 aa16.93■□□□□ 0.3
UBE2D3-232ENST00000514755 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
UBE2D3-232ENST00000514755 KDM5DQ9BY66 1539 aa16.92■□□□□ 0.3
UBE2D3-232ENST00000514755 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
UBE2D3-232ENST00000514755 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
UBE2D3-232ENST00000514755 WASHC2CQ9Y4E1 1318 aa16.91■□□□□ 0.3
UBE2D3-232ENST00000514755 SETD1BQ9UPS6 1966 aaKnown RBP16.9■□□□□ 0.3
UBE2D3-232ENST00000514755 REM2Q8IYK8 340 aaPredicted RBP16.9■□□□□ 0.3
UBE2D3-232ENST00000514755 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
UBE2D3-232ENST00000514755 RRBP1Q9P2E9 1410 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-232ENST00000514755 ITGAEP38570 1179 aa16.89■□□□□ 0.29
UBE2D3-232ENST00000514755 ABCC3O15438 1527 aa16.88■□□□□ 0.29
UBE2D3-232ENST00000514755 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-232ENST00000514755 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.291e-10■■■□□ 14.9
UBE2D3-232ENST00000514755 NPATQ14207 1427 aa16.87■□□□□ 0.29
UBE2D3-232ENST00000514755 CEP152O94986 1710 aa16.87■□□□□ 0.29
UBE2D3-232ENST00000514755 FAM135AQ9P2D6 1515 aa16.87■□□□□ 0.29
UBE2D3-232ENST00000514755 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-232ENST00000514755 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
UBE2D3-232ENST00000514755 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
UBE2D3-232ENST00000514755 PZPP20742 1482 aa16.85■□□□□ 0.29
UBE2D3-232ENST00000514755 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
UBE2D3-232ENST00000514755 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-232ENST00000514755 ANKRD50Q9ULJ7 1429 aa16.84■□□□□ 0.29
UBE2D3-232ENST00000514755 MYO3AQ8NEV4 1616 aa16.84■□□□□ 0.29
UBE2D3-232ENST00000514755 CAMSAP1Q5T5Y3 1602 aa16.82■□□□□ 0.28
UBE2D3-232ENST00000514755 ROCK1Q13464 1354 aa16.82■□□□□ 0.28
UBE2D3-232ENST00000514755 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
UBE2D3-232ENST00000514755 STRCQ7RTU9 1775 aa16.79■□□□□ 0.28
UBE2D3-232ENST00000514755 TNRQ92752 1358 aa16.79■□□□□ 0.28
UBE2D3-232ENST00000514755 CEP170BQ9Y4F5 1589 aaPredicted RBP16.79■□□□□ 0.28
UBE2D3-232ENST00000514755 ZNF142P52746 1687 aaPredicted RBP16.78■□□□□ 0.28
UBE2D3-232ENST00000514755 CFAP65Q6ZU64 1925 aaKnown RBP16.78■□□□□ 0.28
UBE2D3-232ENST00000514755 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
UBE2D3-232ENST00000514755 ERVK-7P63135 1459 aa16.77■□□□□ 0.28
UBE2D3-232ENST00000514755 LMTK2Q8IWU2 1503 aa16.76■□□□□ 0.27
UBE2D3-232ENST00000514755 KANK1Q14678 1352 aa16.76■□□□□ 0.27
UBE2D3-232ENST00000514755 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
UBE2D3-232ENST00000514755 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
UBE2D3-232ENST00000514755 UNC13BO14795 1591 aa16.74■□□□□ 0.27
UBE2D3-232ENST00000514755 EFCAB6Q5THR3 1501 aa16.71■□□□□ 0.27
UBE2D3-232ENST00000514755 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
UBE2D3-232ENST00000514755 NCKAP5LQ9HCH0 1330 aa16.7■□□□□ 0.26
UBE2D3-232ENST00000514755 NAIPQ13075 1403 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms