RNA–Protein interactions for RNA: ENST00000514636.1

LEMD2-213, Transcript of LEM domain containing 2, humanhuman

TSL 3

Gene LEMD2, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-213ENST00000514636 MBD5Q9P267 1494 aa24.16■■□□□ 1.46
LEMD2-213ENST00000514636 DEPDC5O75140 1603 aa24.15■■□□□ 1.46
LEMD2-213ENST00000514636 TNRQ92752 1358 aa24.15■■□□□ 1.46
LEMD2-213ENST00000514636 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
LEMD2-213ENST00000514636 CFDP1Q9UEE9 299 aaPredicted RBP24.14■■□□□ 1.45
LEMD2-213ENST00000514636 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
LEMD2-213ENST00000514636 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
LEMD2-213ENST00000514636 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
LEMD2-213ENST00000514636 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
LEMD2-213ENST00000514636 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
LEMD2-213ENST00000514636 SCAF1Q9H7N4 1312 aaKnown RBP24.1■■□□□ 1.45
LEMD2-213ENST00000514636 FBXO31Q5XUX0 539 aaPredicted RBP24.07■■□□□ 1.44
LEMD2-213ENST00000514636 ANKLE2Q86XL3 938 aa24.07■■□□□ 1.44
LEMD2-213ENST00000514636 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
LEMD2-213ENST00000514636 MIA2Q96PC5 1412 aa24.06■■□□□ 1.44
LEMD2-213ENST00000514636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.05■■□□□ 1.44
LEMD2-213ENST00000514636 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
LEMD2-213ENST00000514636 THEMISQ8N1K5 641 aaPredicted RBP24.04■■□□□ 1.44
LEMD2-213ENST00000514636 LRRC7Q96NW7 1537 aa24.04■■□□□ 1.44
LEMD2-213ENST00000514636 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
LEMD2-213ENST00000514636 SYNMO15061 1565 aa24.03■■□□□ 1.44
LEMD2-213ENST00000514636 UGGT1Q9NYU2 1555 aa24.03■■□□□ 1.44
LEMD2-213ENST00000514636 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
LEMD2-213ENST00000514636 RNF17Q9BXT8 1623 aaKnown RBP24.02■■□□□ 1.44
LEMD2-213ENST00000514636 STRCP1A6NGW2 1772 aa24.01■■□□□ 1.43
LEMD2-213ENST00000514636 IQGAP1P46940 1657 aa24.01■■□□□ 1.43
LEMD2-213ENST00000514636 RGS17Q9UGC6 210 aaPredicted RBP23.98■■□□□ 1.43
LEMD2-213ENST00000514636 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
LEMD2-213ENST00000514636 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
LEMD2-213ENST00000514636 KIF3BO15066 747 aa23.95■■□□□ 1.42
LEMD2-213ENST00000514636 CCDC141Q6ZP82 1450 aa23.94■■□□□ 1.42
LEMD2-213ENST00000514636 ZC3H13Q5T200 1668 aaKnown RBP23.93■■□□□ 1.42
LEMD2-213ENST00000514636 WASHC2CQ9Y4E1 1318 aa23.93■■□□□ 1.42
LEMD2-213ENST00000514636 EHBP1L1Q8N3D4 1523 aa23.93■■□□□ 1.42
LEMD2-213ENST00000514636 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
LEMD2-213ENST00000514636 RSPH4AQ5TD94 716 aa23.89■■□□□ 1.41
LEMD2-213ENST00000514636 ABCC3O15438 1527 aa23.86■■□□□ 1.41
LEMD2-213ENST00000514636 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
LEMD2-213ENST00000514636 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
LEMD2-213ENST00000514636 CAMSAP2Q08AD1 1489 aa23.84■■□□□ 1.41
LEMD2-213ENST00000514636 ARHGAP23Q9P227 1491 aa23.84■■□□□ 1.41
LEMD2-213ENST00000514636 FAM135BQ49AJ0 1406 aa23.83■■□□□ 1.4
LEMD2-213ENST00000514636 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
LEMD2-213ENST00000514636 SLIT1O75093 1534 aa23.82■■□□□ 1.4
LEMD2-213ENST00000514636 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
LEMD2-213ENST00000514636 NCOA2Q15596 1464 aa23.81■■□□□ 1.4
LEMD2-213ENST00000514636 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
LEMD2-213ENST00000514636 MROH1Q8NDA8 1641 aa23.8■■□□□ 1.4
LEMD2-213ENST00000514636 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
LEMD2-213ENST00000514636 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
LEMD2-213ENST00000514636 POTEAQ6S8J7 498 aa23.74■■□□□ 1.39
LEMD2-213ENST00000514636 LTKP29376 864 aa23.72■■□□□ 1.39
LEMD2-213ENST00000514636 ARHGAP31Q2M1Z3 1444 aa23.72■■□□□ 1.39
LEMD2-213ENST00000514636 TSPY4P0CV99 314 aa23.68■■□□□ 1.38
LEMD2-213ENST00000514636 TSPY10P0CW01 314 aa23.68■■□□□ 1.38
LEMD2-213ENST00000514636 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
LEMD2-213ENST00000514636 MAP3K1Q13233 1512 aa23.67■■□□□ 1.38
LEMD2-213ENST00000514636 KDM5AP29375 1690 aaKnown RBP23.64■■□□□ 1.38
LEMD2-213ENST00000514636 TXNDC2Q86VQ3 553 aa23.64■■□□□ 1.37
LEMD2-213ENST00000514636 CEP152O94986 1710 aa23.64■■□□□ 1.37
LEMD2-213ENST00000514636 TMEM94Q12767 1356 aa23.64■■□□□ 1.37
LEMD2-213ENST00000514636 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
LEMD2-213ENST00000514636 ROBO1Q9Y6N7 1651 aa23.63■■□□□ 1.37
LEMD2-213ENST00000514636 TMEM2Q9UHN6 1383 aa23.63■■□□□ 1.37
LEMD2-213ENST00000514636 LRRC9Q6ZRR7 1453 aa23.62■■□□□ 1.37
LEMD2-213ENST00000514636 TET3O43151 1660 aa23.61■■□□□ 1.37
LEMD2-213ENST00000514636 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
LEMD2-213ENST00000514636 NWD1Q149M9 1564 aa23.58■■□□□ 1.37
LEMD2-213ENST00000514636 KCNA6P17658 529 aa23.58■■□□□ 1.37
LEMD2-213ENST00000514636 PIK3C2BO00750 1634 aa23.58■■□□□ 1.36
LEMD2-213ENST00000514636 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
LEMD2-213ENST00000514636 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
LEMD2-213ENST00000514636 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
LEMD2-213ENST00000514636 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
LEMD2-213ENST00000514636 CFAP65Q6ZU64 1925 aaKnown RBP23.54■■□□□ 1.36
LEMD2-213ENST00000514636 EFCAB6Q5THR3 1501 aa23.53■■□□□ 1.36
LEMD2-213ENST00000514636 ERBINQ96RT1 1412 aa23.52■■□□□ 1.36
LEMD2-213ENST00000514636 JCADQ9P266 1359 aa23.51■■□□□ 1.35
LEMD2-213ENST00000514636 LMTK2Q8IWU2 1503 aa23.5■■□□□ 1.35
LEMD2-213ENST00000514636 MYOM3Q5VTT5 1437 aa23.48■■□□□ 1.35
LEMD2-213ENST00000514636 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
LEMD2-213ENST00000514636 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
LEMD2-213ENST00000514636 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
LEMD2-213ENST00000514636 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
LEMD2-213ENST00000514636 PROSER2Q86WR7 435 aaPredicted RBP23.45■■□□□ 1.34
LEMD2-213ENST00000514636 NOS1P29475 1434 aa23.44■■□□□ 1.34
LEMD2-213ENST00000514636 IDI1Q13907 227 aa23.44■■□□□ 1.34
LEMD2-213ENST00000514636 SLAIN2Q9P270 581 aa23.44■■□□□ 1.34
LEMD2-213ENST00000514636 MSH6P52701 1360 aa23.43■■□□□ 1.34
LEMD2-213ENST00000514636 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.34
LEMD2-213ENST00000514636 LRP6O75581 1613 aa23.43■■□□□ 1.34
LEMD2-213ENST00000514636 SLC26A8Q96RN1 970 aa23.42■■□□□ 1.34
LEMD2-213ENST00000514636 ADGRB3O60242 1522 aa23.42■■□□□ 1.34
LEMD2-213ENST00000514636 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
LEMD2-213ENST00000514636 SPATA31A6Q5VVP1 1343 aa23.4■■□□□ 1.34
LEMD2-213ENST00000514636 CROCC2H7BZ55 1655 aa23.4■■□□□ 1.34
LEMD2-213ENST00000514636 RBM33Q96EV2 1170 aaKnown RBP23.38■■□□□ 1.33
LEMD2-213ENST00000514636 ABCC5O15440 1437 aa23.38■■□□□ 1.33
LEMD2-213ENST00000514636 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
LEMD2-213ENST00000514636 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms