RNA–Protein interactions for RNA: ENST00000514485.5

PACRGL-231, Transcript of parkin coregulated like, human

TSL 3

Gene PACRGL, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-231	ENST00000514485	FAM135A	Q9P2D6	1515 aa		33.12	■■■□□ 2.89
PACRGL-231	ENST00000514485	MIA2	Q96PC5	1412 aa		33.11	■■■□□ 2.89
PACRGL-231	ENST00000514485	TSPY4	P0CV99	314 aa		33.11	■■■□□ 2.89
PACRGL-231	ENST00000514485	TSPY10	P0CW01	314 aa		33.11	■■■□□ 2.89
PACRGL-231	ENST00000514485	RNF17	Q9BXT8	1623 aa	Known RBP	33.1	■■■□□ 2.89
PACRGL-231	ENST00000514485	CROCC2	H7BZ55	1655 aa		33.1	■■■□□ 2.89
PACRGL-231	ENST00000514485	PTPN23	Q9H3S7	1636 aa		33.06	■■■□□ 2.88
PACRGL-231	ENST00000514485	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.06	■■■□□ 2.88
PACRGL-231	ENST00000514485	DNMT1	P26358	1616 aa	Known RBP	33.06	■■■□□ 2.88
PACRGL-231	ENST00000514485	LTBP4	Q8N2S1	1624 aa		33.05	■■■□□ 2.88
PACRGL-231	ENST00000514485	PZP	P20742	1482 aa		33.05	■■■□□ 2.88
PACRGL-231	ENST00000514485	PLA2R1	Q13018	1463 aa		33.04	■■■□□ 2.88
PACRGL-231	ENST00000514485	ZC3H13	Q5T200	1668 aa	Known RBP	33.02	■■■□□ 2.88
PACRGL-231	ENST00000514485	A2ML1	A8K2U0	1454 aa		33.02	■■■□□ 2.88
PACRGL-231	ENST00000514485	NCKAP5L	Q9HCH0	1330 aa		33.02	■■■□□ 2.88
PACRGL-231	ENST00000514485	TCOF1	Q13428	1488 aa	Known RBP	33	■■■□□ 2.87
PACRGL-231	ENST00000514485	CEP152	O94986	1710 aa		33	■■■□□ 2.87
PACRGL-231	ENST00000514485	POLR1A	O95602	1720 aa	Predicted RBP	33	■■■□□ 2.87
PACRGL-231	ENST00000514485	MROH1	Q8NDA8	1641 aa		33	■■■□□ 2.87
PACRGL-231	ENST00000514485	FBXO31	Q5XUX0	539 aa	Predicted RBP	33	■■■□□ 2.87
PACRGL-231	ENST00000514485	WASHC2C	Q9Y4E1	1318 aa		33	■■■□□ 2.87
PACRGL-231	ENST00000514485	FGD6	Q6ZV73	1430 aa		32.99	■■■□□ 2.87
PACRGL-231	ENST00000514485	CFAP65	Q6ZU64	1925 aa	Known RBP	32.97	■■■□□ 2.87
PACRGL-231	ENST00000514485	TNR	Q92752	1358 aa		32.96	■■■□□ 2.87
PACRGL-231	ENST00000514485	ABCC3	O15438	1527 aa		32.96	■■■□□ 2.87
PACRGL-231	ENST00000514485	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.94	■■■□□ 2.86
PACRGL-231	ENST00000514485	DUOX2	Q9NRD8	1548 aa		32.93	■■■□□ 2.86
PACRGL-231	ENST00000514485	SHANK2	Q9UPX8	1470 aa		32.93	■■■□□ 2.86
PACRGL-231	ENST00000514485	ABCC5	O15440	1437 aa		32.91	■■■□□ 2.86
PACRGL-231	ENST00000514485	PKD2	Q13563	968 aa		32.9	■■■□□ 2.86
PACRGL-231	ENST00000514485	NEURL4	Q96JN8	1562 aa		32.87	■■■□□ 2.85
PACRGL-231	ENST00000514485	DAPK1	P53355	1430 aa		32.85	■■■□□ 2.85
PACRGL-231	ENST00000514485	SPATA31D1	Q6ZQQ2	1576 aa		32.85	■■■□□ 2.85
PACRGL-231	ENST00000514485	KIF15	Q9NS87	1388 aa		32.84	■■■□□ 2.85
PACRGL-231	ENST00000514485	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.84	■■■□□ 2.85
PACRGL-231	ENST00000514485	IQSEC2	Q5JU85	1478 aa		32.84	■■■□□ 2.85
PACRGL-231	ENST00000514485	NLRP1	Q9C000	1473 aa		32.83	■■■□□ 2.85
PACRGL-231	ENST00000514485	PRDM15	P57071	1507 aa	Predicted RBP	32.82	■■■□□ 2.85
PACRGL-231	ENST00000514485	DEPDC5	O75140	1603 aa		32.81	■■■□□ 2.84
PACRGL-231	ENST00000514485	UGGT1	Q9NYU2	1555 aa		32.81	■■■□□ 2.84
PACRGL-231	ENST00000514485	ERVK-7	P63135	1459 aa		32.8	■■■□□ 2.84
PACRGL-231	ENST00000514485	ERBIN	Q96RT1	1412 aa		32.79	■■■□□ 2.84
PACRGL-231	ENST00000514485	FAM50A	Q14320	339 aa	Known RBP	32.78	■■■□□ 2.84
PACRGL-231	ENST00000514485	RRP7BP	Q9NSQ0	103 aa		32.77	■■■□□ 2.84
PACRGL-231	ENST00000514485	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.76	■■■□□ 2.83
PACRGL-231	ENST00000514485	UBR1	Q8IWV7	1749 aa		32.74	■■■□□ 2.83
PACRGL-231	ENST00000514485	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.69	■■■□□ 2.82
PACRGL-231	ENST00000514485	CHIC2	Q9UKJ5	165 aa		32.69	■■■□□ 2.82
PACRGL-231	ENST00000514485	IQGAP1	P46940	1657 aa		32.69	■■■□□ 2.82
PACRGL-231	ENST00000514485	ANKRD30A	Q9BXX3	1397 aa		32.66	■■■□□ 2.82
PACRGL-231	ENST00000514485	ARHGAP31	Q2M1Z3	1444 aa		32.65	■■■□□ 2.82
PACRGL-231	ENST00000514485	MED14	O60244	1454 aa		32.65	■■■□□ 2.82
PACRGL-231	ENST00000514485	ANKLE2	Q86XL3	938 aa		32.64	■■■□□ 2.82
PACRGL-231	ENST00000514485	VWDE	Q8N2E2	1590 aa		32.63	■■■□□ 2.81
PACRGL-231	ENST00000514485	ADGRL2	O95490	1459 aa		32.63	■■■□□ 2.81
PACRGL-231	ENST00000514485	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
PACRGL-231	ENST00000514485	NPHP4	O75161	1426 aa	Predicted RBP	32.61	■■■□□ 2.81
PACRGL-231	ENST00000514485	STRCP1	A6NGW2	1772 aa		32.59	■■■□□ 2.81
PACRGL-231	ENST00000514485	PIK3C2B	O00750	1634 aa		32.59	■■■□□ 2.81
PACRGL-231	ENST00000514485	CPS1	P31327	1500 aa		32.58	■■■□□ 2.81
PACRGL-231	ENST00000514485	LMTK2	Q8IWU2	1503 aa		32.58	■■■□□ 2.81
PACRGL-231	ENST00000514485	KANK1	Q14678	1352 aa		32.56	■■■□□ 2.8
PACRGL-231	ENST00000514485	UBAP1L	F5GYI3	381 aa		32.53	■■■□□ 2.8
PACRGL-231	ENST00000514485	EFCAB6	Q5THR3	1501 aa		32.52	■■■□□ 2.8
PACRGL-231	ENST00000514485	SYNM	O15061	1565 aa		32.51	■■■□□ 2.79
PACRGL-231	ENST00000514485	ITGAE	P38570	1179 aa		32.5	■■■□□ 2.79
PACRGL-231	ENST00000514485	SLIT1	O75093	1534 aa		32.5	■■■□□ 2.79
PACRGL-231	ENST00000514485	ARHGAP23	Q9P227	1491 aa		32.49	■■■□□ 2.79
PACRGL-231	ENST00000514485	RRBP1	Q9P2E9	1410 aa	Known RBP	32.49	■■■□□ 2.79
PACRGL-231	ENST00000514485	KDM5A	P29375	1690 aa	Known RBP	32.49	■■■□□ 2.79
PACRGL-231	ENST00000514485	SCAF11	Q99590	1463 aa	Known RBP	32.48	■■■□□ 2.79
PACRGL-231	ENST00000514485	ANKRD50	Q9ULJ7	1429 aa		32.44	■■■□□ 2.78
PACRGL-231	ENST00000514485	TET3	O43151	1660 aa		32.42	■■■□□ 2.78
PACRGL-231	ENST00000514485	LTK	P29376	864 aa		32.41	■■■□□ 2.78
PACRGL-231	ENST00000514485	MYO5B	Q9ULV0	1848 aa		32.41	■■■□□ 2.78
PACRGL-231	ENST00000514485	UNC13B	O14795	1591 aa		32.41	■■■□□ 2.78
PACRGL-231	ENST00000514485	GCC2	Q8IWJ2	1684 aa		32.4	■■■□□ 2.78
PACRGL-231	ENST00000514485	NOS1	P29475	1434 aa		32.4	■■■□□ 2.78
PACRGL-231	ENST00000514485	ALK	Q9UM73	1620 aa		32.38	■■■□□ 2.77
PACRGL-231	ENST00000514485	DISP3	Q9P2K9	1392 aa		32.38	■■■□□ 2.77
PACRGL-231	ENST00000514485	ROCK1	Q13464	1354 aa		32.37	■■■□□ 2.77
PACRGL-231	ENST00000514485	XIRP1	Q702N8	1843 aa	Known RBP	32.36	■■■□□ 2.77
PACRGL-231	ENST00000514485	TXNDC2	Q86VQ3	553 aa		32.36	■■■□□ 2.77
PACRGL-231	ENST00000514485	ADGRB3	O60242	1522 aa		32.36	■■■□□ 2.77
PACRGL-231	ENST00000514485	IDI1	Q13907	227 aa		32.35	■■■□□ 2.77
PACRGL-231	ENST00000514485	LRRC7	Q96NW7	1537 aa		32.35	■■■□□ 2.77
PACRGL-231	ENST00000514485	TMEM2	Q9UHN6	1383 aa		32.34	■■■□□ 2.77
PACRGL-231	ENST00000514485	RPRD2	Q5VT52	1461 aa	Known RBP	32.32	■■■□□ 2.76
PACRGL-231	ENST00000514485	STAG3	Q9UJ98	1225 aa		32.31	■■■□□ 2.76
PACRGL-231	ENST00000514485		E9PCH4	1651 aa		32.31	■■■□□ 2.76
PACRGL-231	ENST00000514485	SCAF1	Q9H7N4	1312 aa	Known RBP	32.29	■■■□□ 2.76
PACRGL-231	ENST00000514485	TOM1	O60784	492 aa		32.29	■■■□□ 2.76
PACRGL-231	ENST00000514485	PIP4K2B	P78356	416 aa		32.29	■■■□□ 2.76
PACRGL-231	ENST00000514485	EID1	Q9Y6B2	187 aa		32.29	■■■□□ 2.76
PACRGL-231	ENST00000514485	IQGAP3	Q86VI3	1631 aa		32.28	■■■□□ 2.76
PACRGL-231	ENST00000514485	ILDR2	Q71H61	639 aa		32.22	■■■□□ 2.75
PACRGL-231	ENST00000514485	TMEM131L	A2VDJ0	1609 aa		32.22	■■■□□ 2.75
PACRGL-231	ENST00000514485	SLC52A1	Q9NWF4	448 aa		32.21	■■■□□ 2.75
PACRGL-231	ENST00000514485	HSPA1L	P34931	641 aa		32.2	■■■□□ 2.75
PACRGL-231	ENST00000514485	ZFYVE9	O95405	1425 aa		32.13	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 138 ms