RNA–Protein interactions for RNA: ENST00000514434.1

DDR1-275, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-275ENST00000514434 DAPK1P53355 1430 aa20.22■□□□□ 0.83
DDR1-275ENST00000514434 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
DDR1-275ENST00000514434 TCOF1Q13428 1488 aaKnown RBP20.22■□□□□ 0.83
DDR1-275ENST00000514434 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
DDR1-275ENST00000514434 KDM5DQ9BY66 1539 aa20.2■□□□□ 0.82
DDR1-275ENST00000514434 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
DDR1-275ENST00000514434 STRCQ7RTU9 1775 aa20.18■□□□□ 0.82
DDR1-275ENST00000514434 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
DDR1-275ENST00000514434 DNMT1P26358 1616 aaKnown RBP20.18■□□□□ 0.82
DDR1-275ENST00000514434 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
DDR1-275ENST00000514434 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
DDR1-275ENST00000514434 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
DDR1-275ENST00000514434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDR1-275ENST00000514434 TNRQ92752 1358 aa20.15■□□□□ 0.82
DDR1-275ENST00000514434 CAMSAP1Q5T5Y3 1602 aa20.14■□□□□ 0.81
DDR1-275ENST00000514434 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
DDR1-275ENST00000514434 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
DDR1-275ENST00000514434 EIF2AK4Q9P2K8 1649 aaKnown RBP20.13■□□□□ 0.81
DDR1-275ENST00000514434 PZPP20742 1482 aa20.13■□□□□ 0.81
DDR1-275ENST00000514434 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
DDR1-275ENST00000514434 NCKAP5LQ9HCH0 1330 aa20.13■□□□□ 0.81
DDR1-275ENST00000514434 CEP170BQ9Y4F5 1589 aaPredicted RBP20.12■□□□□ 0.81
DDR1-275ENST00000514434 FAM135AQ9P2D6 1515 aa20.12■□□□□ 0.81
DDR1-275ENST00000514434 ABCC3O15438 1527 aa20.12■□□□□ 0.81
DDR1-275ENST00000514434 ERBINQ96RT1 1412 aa20.1■□□□□ 0.81
DDR1-275ENST00000514434 MROH1Q8NDA8 1641 aa20.1■□□□□ 0.81
DDR1-275ENST00000514434 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
DDR1-275ENST00000514434 ZNF142P52746 1687 aaPredicted RBP20.09■□□□□ 0.81
DDR1-275ENST00000514434 A2ML1A8K2U0 1454 aa20.08■□□□□ 0.81
DDR1-275ENST00000514434 CERKQ8TCT0 537 aa20.08■□□□□ 0.81
DDR1-275ENST00000514434 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
DDR1-275ENST00000514434 CEP152O94986 1710 aa20.07■□□□□ 0.8
DDR1-275ENST00000514434 ITGAEP38570 1179 aa20.07■□□□□ 0.8
DDR1-275ENST00000514434 PTPRTO14522 1441 aa20.07■□□□□ 0.8
DDR1-275ENST00000514434 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
DDR1-275ENST00000514434 KANK1Q14678 1352 aa20.04■□□□□ 0.8
DDR1-275ENST00000514434 PKD2Q13563 968 aa20.03■□□□□ 0.8
DDR1-275ENST00000514434 ADGRL2O95490 1459 aa20.03■□□□□ 0.8
DDR1-275ENST00000514434 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.8
DDR1-275ENST00000514434 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
DDR1-275ENST00000514434 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
DDR1-275ENST00000514434 NLRP1Q9C000 1473 aa20■□□□□ 0.79
DDR1-275ENST00000514434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
DDR1-275ENST00000514434 THEMISQ8N1K5 641 aaPredicted RBP20■□□□□ 0.79
DDR1-275ENST00000514434 ANKRD50Q9ULJ7 1429 aa19.99■□□□□ 0.79
DDR1-275ENST00000514434 SPATA31D1Q6ZQQ2 1576 aa19.99■□□□□ 0.79
DDR1-275ENST00000514434 DEPDC5O75140 1603 aa19.98■□□□□ 0.79
DDR1-275ENST00000514434 UGGT1Q9NYU2 1555 aa19.97■□□□□ 0.79
DDR1-275ENST00000514434 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
DDR1-275ENST00000514434 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
DDR1-275ENST00000514434 ARHGAP31Q2M1Z3 1444 aa19.94■□□□□ 0.78
DDR1-275ENST00000514434 LTBP4Q8N2S1 1624 aa19.92■□□□□ 0.78
DDR1-275ENST00000514434 VWDEQ8N2E2 1590 aa19.91■□□□□ 0.78
DDR1-275ENST00000514434 ROCK1Q13464 1354 aa19.91■□□□□ 0.78
DDR1-275ENST00000514434 POLR1AO95602 1720 aaPredicted RBP19.9■□□□□ 0.78
DDR1-275ENST00000514434 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
DDR1-275ENST00000514434 LMTK2Q8IWU2 1503 aa19.9■□□□□ 0.78
DDR1-275ENST00000514434 NEURL4Q96JN8 1562 aa19.89■□□□□ 0.77
DDR1-275ENST00000514434 NPHP4O75161 1426 aaPredicted RBP19.86■□□□□ 0.77
DDR1-275ENST00000514434 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
DDR1-275ENST00000514434 IDI1Q13907 227 aa19.86■□□□□ 0.77
DDR1-275ENST00000514434 EFCAB6Q5THR3 1501 aa19.86■□□□□ 0.77
DDR1-275ENST00000514434 RRBP1Q9P2E9 1410 aaKnown RBP19.85■□□□□ 0.77
DDR1-275ENST00000514434 TXNDC2Q86VQ3 553 aa19.84■□□□□ 0.77
DDR1-275ENST00000514434 PIK3C2BO00750 1634 aa19.84■□□□□ 0.77
DDR1-275ENST00000514434 NUP155O75694 1391 aa19.83■□□□□ 0.76
DDR1-275ENST00000514434 LTKP29376 864 aa19.82■□□□□ 0.76
DDR1-275ENST00000514434 UNC13BO14795 1591 aa19.82■□□□□ 0.76
DDR1-275ENST00000514434 SYNMO15061 1565 aa19.82■□□□□ 0.76
DDR1-275ENST00000514434 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
DDR1-275ENST00000514434 NOS1P29475 1434 aa19.81■□□□□ 0.76
DDR1-275ENST00000514434 MED14O60244 1454 aa19.8■□□□□ 0.76
DDR1-275ENST00000514434 TET3O43151 1660 aa19.8■□□□□ 0.76
DDR1-275ENST00000514434 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
DDR1-275ENST00000514434 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
DDR1-275ENST00000514434 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
DDR1-275ENST00000514434 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
DDR1-275ENST00000514434 UBAP1LF5GYI3 381 aa19.77■□□□□ 0.76
DDR1-275ENST00000514434 RPRD2Q5VT52 1461 aaKnown RBP19.77■□□□□ 0.76
DDR1-275ENST00000514434 ARHGAP23Q9P227 1491 aa19.77■□□□□ 0.76
DDR1-275ENST00000514434 SLIT1O75093 1534 aa19.76■□□□□ 0.75
DDR1-275ENST00000514434 GCC2Q8IWJ2 1684 aa19.76■□□□□ 0.75
DDR1-275ENST00000514434 IQSEC2Q5JU85 1478 aa19.76■□□□□ 0.75
DDR1-275ENST00000514434 CHGAP10645 457 aaKnown RBP19.76■□□□□ 0.75
DDR1-275ENST00000514434 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
DDR1-275ENST00000514434 IQGAP3Q86VI3 1631 aa19.74■□□□□ 0.75
DDR1-275ENST00000514434 E9PCH4 1651 aa19.73■□□□□ 0.75
DDR1-275ENST00000514434 ADGRB3O60242 1522 aa19.72■□□□□ 0.75
DDR1-275ENST00000514434 CPS1P31327 1500 aa19.72■□□□□ 0.75
DDR1-275ENST00000514434 BCANQ96GW7 911 aa19.72■□□□□ 0.75
DDR1-275ENST00000514434 NAIPQ13075 1403 aa19.71■□□□□ 0.75
DDR1-275ENST00000514434 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
DDR1-275ENST00000514434 TRIM52Q96A61 297 aa19.69■□□□□ 0.74
DDR1-275ENST00000514434 SLC26A8Q96RN1 970 aa19.69■□□□□ 0.74
DDR1-275ENST00000514434 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
DDR1-275ENST00000514434 PPP1R15AO75807 674 aaPredicted RBP19.68■□□□□ 0.74
DDR1-275ENST00000514434 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
DDR1-275ENST00000514434 PIP4K2BP78356 416 aa19.67■□□□□ 0.74
DDR1-275ENST00000514434 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
DDR1-275ENST00000514434 STRCP1A6NGW2 1772 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms