RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 ATP10AO60312 1499 aa16.99■□□□□ 0.31
HOXC10-204ENST00000514415 ERBINQ96RT1 1412 aa16.98■□□□□ 0.31
HOXC10-204ENST00000514415 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
HOXC10-204ENST00000514415 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
HOXC10-204ENST00000514415 ABCC1P33527 1531 aa16.96■□□□□ 0.3
HOXC10-204ENST00000514415 PLCH2O75038 1416 aa16.96■□□□□ 0.3
HOXC10-204ENST00000514415 HNRNPMP52272 730 aaKnown RBP eCLIP16.95■□□□□ 0.3
HOXC10-204ENST00000514415 FKBP8Q14318 412 aa16.94■□□□□ 0.3
HOXC10-204ENST00000514415 ERCC6L2Q5T890 1561 aa16.94■□□□□ 0.3
HOXC10-204ENST00000514415 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
HOXC10-204ENST00000514415 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
HOXC10-204ENST00000514415 RTEL1-TNFRSF6BF6WH68 1400 aa16.92■□□□□ 0.3
HOXC10-204ENST00000514415 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
HOXC10-204ENST00000514415 CCDC144AA2RUR9 1427 aa16.9■□□□□ 0.3
HOXC10-204ENST00000514415 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
HOXC10-204ENST00000514415 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.3
HOXC10-204ENST00000514415 CEP152O94986 1710 aa16.89■□□□□ 0.29
HOXC10-204ENST00000514415 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.29
HOXC10-204ENST00000514415 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
HOXC10-204ENST00000514415 PRAG1Q86YV5 1406 aa16.88■□□□□ 0.29
HOXC10-204ENST00000514415 PRDM15P57071 1507 aaPredicted RBP16.87■□□□□ 0.29
HOXC10-204ENST00000514415 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
HOXC10-204ENST00000514415 ABCA9Q8IUA7 1624 aa16.87■□□□□ 0.29
HOXC10-204ENST00000514415 WDR7Q9Y4E6 1490 aa16.86■□□□□ 0.29
HOXC10-204ENST00000514415 MRS2Q9HD23 443 aa16.86■□□□□ 0.29
HOXC10-204ENST00000514415 SPHKAPQ2M3C7 1700 aa16.85■□□□□ 0.29
HOXC10-204ENST00000514415 STAC3Q96MF2 364 aa16.85■□□□□ 0.29
HOXC10-204ENST00000514415 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
HOXC10-204ENST00000514415 TET3O43151 1660 aa16.85■□□□□ 0.29
HOXC10-204ENST00000514415 CARD11Q9BXL7 1154 aa16.84■□□□□ 0.29
HOXC10-204ENST00000514415 PLA2R1Q13018 1463 aa16.84■□□□□ 0.29
HOXC10-204ENST00000514415 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
HOXC10-204ENST00000514415 INO80Q9ULG1 1556 aaPredicted RBP16.82■□□□□ 0.28
HOXC10-204ENST00000514415 A2MP01023 1474 aa16.82■□□□□ 0.28
HOXC10-204ENST00000514415 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
HOXC10-204ENST00000514415 IQGAP1P46940 1657 aa16.8■□□□□ 0.28
HOXC10-204ENST00000514415 TRPM2O94759 1503 aa16.8■□□□□ 0.28
HOXC10-204ENST00000514415 ZMYM4Q5VZL5 1548 aa16.8■□□□□ 0.28
HOXC10-204ENST00000514415 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
HOXC10-204ENST00000514415 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
HOXC10-204ENST00000514415 RALBP1Q15311 655 aa16.79■□□□□ 0.28
HOXC10-204ENST00000514415 DCAF11Q8TEB1 546 aa16.79■□□□□ 0.28
HOXC10-204ENST00000514415 VWDEQ8N2E2 1590 aa16.79■□□□□ 0.28
HOXC10-204ENST00000514415 SMG6Q86US8 1419 aaKnown RBP16.79■□□□□ 0.28
HOXC10-204ENST00000514415 INSRP06213 1382 aa16.78■□□□□ 0.28
HOXC10-204ENST00000514415 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
HOXC10-204ENST00000514415 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
HOXC10-204ENST00000514415 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.27
HOXC10-204ENST00000514415 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
HOXC10-204ENST00000514415 MADDQ8WXG6 1647 aa16.76■□□□□ 0.27
HOXC10-204ENST00000514415 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
HOXC10-204ENST00000514415 PTPRTO14522 1441 aa16.74■□□□□ 0.27
HOXC10-204ENST00000514415 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
HOXC10-204ENST00000514415 KIF1BO60333 1816 aa16.74■□□□□ 0.27
HOXC10-204ENST00000514415 LRPPRCP42704 1394 aaKnown RBP16.74■□□□□ 0.27
HOXC10-204ENST00000514415 MYBBP1AQ9BQG0 1328 aaKnown RBP16.73■□□□□ 0.27
HOXC10-204ENST00000514415 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
HOXC10-204ENST00000514415 ST20-MTHFSA0A0A6YYL1 179 aa16.73■□□□□ 0.27
HOXC10-204ENST00000514415 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
HOXC10-204ENST00000514415 BCANQ96GW7 911 aa16.71■□□□□ 0.27
HOXC10-204ENST00000514415 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
HOXC10-204ENST00000514415 SPAG9O60271 1321 aaKnown RBP16.7■□□□□ 0.26
HOXC10-204ENST00000514415 SCAPERQ9BY12 1400 aa16.7■□□□□ 0.26
HOXC10-204ENST00000514415 IFT172Q9UG01 1749 aa16.7■□□□□ 0.26
HOXC10-204ENST00000514415 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
HOXC10-204ENST00000514415 PARD3Q8TEW0 1356 aa16.69■□□□□ 0.26
HOXC10-204ENST00000514415 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
HOXC10-204ENST00000514415 FANCAO15360 1455 aa16.68■□□□□ 0.26
HOXC10-204ENST00000514415 KANK1Q14678 1352 aa16.68■□□□□ 0.26
HOXC10-204ENST00000514415 RNF123Q5XPI4 1314 aa16.68■□□□□ 0.26
HOXC10-204ENST00000514415 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
HOXC10-204ENST00000514415 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
HOXC10-204ENST00000514415 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
HOXC10-204ENST00000514415 MROH1Q8NDA8 1641 aa16.66■□□□□ 0.26
HOXC10-204ENST00000514415 SYNMO15061 1565 aa16.65■□□□□ 0.26
HOXC10-204ENST00000514415 KIDINS220Q9ULH0 1771 aa16.65■□□□□ 0.26
HOXC10-204ENST00000514415 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
HOXC10-204ENST00000514415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXC10-204ENST00000514415 MYOM2P54296 1465 aa16.63■□□□□ 0.25
HOXC10-204ENST00000514415 TMF1P82094 1093 aa16.63■□□□□ 0.25
HOXC10-204ENST00000514415 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
HOXC10-204ENST00000514415 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
HOXC10-204ENST00000514415 ADGRL1O94910 1474 aa16.62■□□□□ 0.25
HOXC10-204ENST00000514415 TESK2Q96S53 571 aa16.62■□□□□ 0.25
HOXC10-204ENST00000514415 EFCAB6Q5THR3 1501 aa16.61■□□□□ 0.25
HOXC10-204ENST00000514415 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
HOXC10-204ENST00000514415 PER1O15534 1290 aaPredicted RBP16.61■□□□□ 0.25
HOXC10-204ENST00000514415 PDE3BQ13370 1112 aa16.61■□□□□ 0.25
HOXC10-204ENST00000514415 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
HOXC10-204ENST00000514415 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
HOXC10-204ENST00000514415 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
HOXC10-204ENST00000514415 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
HOXC10-204ENST00000514415 ZNF518AQ6AHZ1 1483 aa16.59■□□□□ 0.25
HOXC10-204ENST00000514415 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
HOXC10-204ENST00000514415 RGL3Q3MIN7 710 aa16.58■□□□□ 0.24
HOXC10-204ENST00000514415 ASXL2Q76L83 1435 aa16.58■□□□□ 0.24
HOXC10-204ENST00000514415 MYOM1P52179 1685 aa16.58■□□□□ 0.24
HOXC10-204ENST00000514415 EIF3AQ14152 1382 aaKnown RBP16.57■□□□□ 0.24
HOXC10-204ENST00000514415 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
HOXC10-204ENST00000514415 SETBP1Q9Y6X0 1596 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms